Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy211s005 Aquilegia oxysepala HOM05D002930 ORTHO05D003283 4.3e-98 361.3 181 100.0
Aqoxy2G03186 Aquilegia oxysepala HOM05D002930 ORTHO05D003283 4.0e-96 354.8 181 98.9
Nn3g21179 Nelumbo nucifera HOM05D002930 ORTHO05D003283 1.7e-73 279.6 181 77.3
TAR365G0233 Trochodendron aralioides HOM05D002930 ORTHO05D003283 1.1e-72 276.9 177 76.8
Dinv11268 Davidia involucrata HOM05D002930 ORTHO05D003283 4.5e-71 271.6 181 74.0
PSO170G5253 Papaver somniferum HOM05D002930 ORTHO05D003283 1.0e-70 270.4 181 73.5
PSO302G0276 Papaver somniferum HOM05D002930 ORTHO05D003283 1.0e-70 270.4 181 73.5
EL10Ac7g17191 Beta vulgaris HOM05D002930 ORTHO05D003283 3.8e-70 268.5 181 71.8
Cfa006078 Carpinus fangiana HOM05D002930 ORTHO05D003283 3.2e-69 265.4 181 69.1
CSS0023451 Camellia sinensis var. sinensis HOM05D002930 ORTHO05D003283 4.2e-69 265.0 181 70.2
Atru.chr5.1328 Acer truncatum HOM05D002930 ORTHO05D003283 5.5e-69 264.6 181 71.3
Ah.08g212870 Amaranthus hybridus HOM05D002930 ORTHO05D003283 7.2e-69 264.2 172 74.4
Hma1.2p1_0628F.1_g191750 Hydrangea macrophylla HOM05D002930 ORTHO05D003283 7.2e-69 264.2 181 73.5
Hma1.2p1_2318F.1_g319800 Hydrangea macrophylla HOM05D002930 ORTHO05D003283 7.2e-69 264.2 181 73.5
vmacro14944 Vaccinium macrocarpon HOM05D002930 ORTHO05D003283 7.2e-69 264.2 181 69.6
GSVIVG01011059001 Vitis vinifera HOM05D002930 ORTHO05D003283 7.2e-69 264.2 181 71.3
MD11G1292400 Malus domestica HOM05D002930 ORTHO05D003283 1.2e-68 263.5 181 69.6
QL12p022973 Quercus lobata HOM05D002930 ORTHO05D003283 1.6e-68 263.1 181 71.3
Haze_04772 Corylus avellana HOM05D002930 ORTHO05D003283 2.1e-68 262.7 181 69.1
CiPaw.07G096000 Carya illinoinensis HOM05D002930 ORTHO05D003283 1.4e-67 260.0 181 70.2
Manes.05G071700 Manihot esculenta HOM05D002930 ORTHO05D003283 1.4e-67 260.0 181 70.7
Psat6g169840 Pisum sativum HOM05D002930 ORTHO05D003283 1.8e-67 259.6 181 69.6
Actinidia21089 Actinidia chinensis HOM05D002930 ORTHO05D003283 3.9e-67 258.5 181 69.1
Rhsim01G0277800 Rhododendron simsii HOM05D002930 ORTHO05D003283 6.7e-67 257.7 181 68.5
MD03G1271800 Malus domestica HOM05D002930 ORTHO05D003283 2.0e-66 256.1 182 67.0
Potri.014G137200 Populus trichocarpa HOM05D002930 ORTHO05D003283 2.0e-66 256.1 181 70.7
Solyc09g074110.4 Solanum lycopersicum HOM05D002930 ORTHO05D003283 2.0e-66 256.1 171 69.6
Peaxi162Scf00941g00113 Petunia axillaris HOM05D002930 ORTHO05D003283 2.6e-66 255.8 171 70.2
TPR.G13301 Trifolium pratense HOM05D002930 ORTHO05D003283 2.6e-66 255.8 181 68.0
Sopen09g028930 Solanum pennellii HOM05D002930 ORTHO05D003283 3.3e-66 255.4 171 69.0
Prupe.8G248000 Prunus persica HOM05D002930 ORTHO05D003283 4.4e-66 255.0 181 65.7
Ciclev10018445m.g Citrus clementina HOM05D002930 ORTHO05D003283 7.4e-66 254.2 181 69.1
Medtr1g089760 Medicago truncatula HOM05D002930 ORTHO05D003283 9.7e-66 253.8 181 66.9
arahy.Tifrunner.gnm1.ann1.K2UAY4 Arachis hypogaea HOM05D002930 ORTHO05D003283 1.7e-65 253.1 181 68.5
arahy.Tifrunner.gnm1.ann1.M1RB0X Arachis hypogaea HOM05D002930 ORTHO05D003283 1.7e-65 253.1 181 68.5
CAN.G956.11 Capsicum annuum HOM05D002930 ORTHO05D003283 1.7e-65 253.1 171 70.8
PSO210G3942 Papaver somniferum HOM05D002930 ORTHO05D003283 1.7e-65 253.1 181 68.0
Phvul.007G168500 Phaseolus vulgaris HOM05D002930 ORTHO05D003283 2.8e-65 252.3 181 67.4
Lj1A43T58 Lonicera japonica HOM05D002930 ORTHO05D003283 3.7e-65 251.9 181 68.0
Hund05360 Selenicereus undatus HOM05D002930 ORTHO05D003283 3.7e-65 251.9 172 72.1
Glyma.02G150200 Glycine max HOM05D002930 ORTHO05D003283 4.8e-65 251.5 181 68.0
Sc05g0005220 Simmondsia chinensis HOM05D002930 ORTHO05D003283 4.8e-65 251.5 171 72.5
FAN27G1593 Fragaria x ananassa HOM05D002930 ORTHO05D003283 8.2e-65 250.8 178 68.0
VMungo0720G1730 Vigna mungo HOM05D002930 ORTHO05D003283 8.2e-65 250.8 181 67.4
Glyma.10G023700 Glycine max HOM05D002930 ORTHO05D003283 1.1e-64 250.4 172 70.9
RcHm_v2.0_Chr6g0291991 Rosa chinensis HOM05D002930 ORTHO05D003283 1.4e-64 250.0 180 66.7
FvH4_2g24180 Fragaria vesca HOM05D002930 ORTHO05D003283 3.1e-64 248.8 178 67.4
FAN24G0623 Fragaria x ananassa HOM05D002930 ORTHO05D003283 3.1e-64 248.8 178 67.4
TWI59G1251 Tripterygium wilfordii HOM05D002930 ORTHO05D003283 5.3e-64 248.1 181 68.0
Lalb_Chr21g0306621 Lupinus albus HOM05D002930 ORTHO05D003283 7.0e-64 247.7 181 67.4
Aqoxy5G00565 Aquilegia oxysepala HOM05D002930 ORTHO05D003283 1.2e-63 246.9 180 68.9
CANSAT25G2793 Cannabis sativa HOM05D002930 ORTHO05D003283 1.6e-63 246.5 171 69.0
FAN15G2723 Fragaria x ananassa HOM05D002930 ORTHO05D003283 1.6e-63 246.5 178 67.4
THA.LOC104802222 Tarenaya hassleriana HOM05D002930 ORTHO05D003283 2.6e-63 245.7 174 69.0
Thecc.01G286000 Theobroma cacao HOM05D002930 ORTHO05D003283 4.5e-63 245.0 180 68.3
AUR62033688 Chenopodium quinoa HOM05D002930 ORTHO05D003283 1.0e-62 243.8 172 68.0
SalBow3G3307 Salvia bowleyana HOM05D002930 ORTHO05D003283 1.0e-62 243.8 172 69.2
Eucgr.H01545 Eucalyptus grandis HOM05D002930 ORTHO05D003283 1.7e-62 243.0 181 68.5
MBI19_g21645_MAGBIO Magnolia biondii HOM05D002930 ORTHO05D003283 1.7e-62 243.0 181 69.1
Lj5g0012178 Lotus japonicus HOM05D002930 ORTHO05D003283 2.2e-62 242.7 181 65.7
Oeu047489.1 Olea europaea HOM05D002930 ORTHO05D003283 2.9e-62 242.3 180 68.3
AUR62036777 Chenopodium quinoa HOM05D002930 ORTHO05D003283 3.8e-62 241.9 172 68.6
CSS0004978 Camellia sinensis var. sinensis HOM05D002930 ORTHO05D003283 5.0e-62 241.5 180 67.2
Cpa.g.sc9.131 Carica papaya HOM05D002930 ORTHO05D003283 6.5e-62 241.1 178 65.7
GSVIVG01022038001 Vitis vinifera HOM05D002930 ORTHO05D003283 8.5e-62 240.7 181 67.4
SGA_v2.0_scaffold11G05785 Striga asiatica HOM05D002930 ORTHO05D003283 1.1e-61 240.4 171 68.4
Duzib138G0507 Durio zibethinus HOM05D002930 ORTHO05D003283 1.5e-61 240.0 181 66.9
ECA236G2879 Erigeron canadensis HOM05D002930 ORTHO05D003283 2.5e-61 239.2 174 69.5
Sabra14G0103600 Salix brachista HOM05D002930 ORTHO05D003283 3.2e-61 238.8 181 66.9
ATR0626G265 Amborella trichopoda HOM05D002930 ORTHO05D003283 7.2e-61 237.7 181 65.7
DCAR_012456 Daucus carota HOM05D002930 ORTHO05D003283 7.2e-61 237.7 172 69.2
Gorai.004G215100 Gossypium raimondii HOM05D002930 ORTHO05D003283 9.4e-61 237.3 181 65.2
MSTRG.17432 Avicennia marina HOM05D002930 ORTHO05D003283 1.6e-60 236.5 181 65.7
Gohir.A08G184940 Gossypium hirsutum HOM05D002930 ORTHO05D003283 1.6e-60 236.5 181 64.1
Gohir.D08G203100 Gossypium hirsutum HOM05D002930 ORTHO05D003283 2.7e-60 235.7 181 64.6
CDE08G1581 Ceratophyllum demersum HOM05D002930 ORTHO05D003283 3.6e-60 235.3 177 67.2
Potri.005G037700 Populus trichocarpa HOM05D002930 ORTHO05D003283 3.6e-60 235.3 172 70.9
HanXRQChr04g0117981 Helianthus annuus HOM05D002930 ORTHO05D003283 6.1e-60 234.6 181 65.7
Carub.0004s3076 Capsella rubella HOM05D002930 ORTHO05D003283 8.0e-60 234.2 172 66.3
Sp4g29950 Schrenkiella parvula HOM05D002930 ORTHO05D003283 1.0e-59 233.8 172 66.3
Zm00001eb131990 Zea mays HOM05D002930 ORTHO05D003283 1.0e-59 233.8 177 66.7
Thhalv10001278m.g Eutrema salsugineum HOM05D002930 ORTHO05D003283 1.4e-59 233.4 172 66.3
Aa31LG1G29470 Aethionema arabicum HOM05D002930 ORTHO05D003283 1.8e-59 233.0 170 67.6
AL4G47650 Arabidopsis lyrata HOM05D002930 ORTHO05D003283 1.8e-59 233.0 172 65.7
Sabra05G0038400 Salix brachista HOM05D002930 ORTHO05D003283 1.8e-59 233.0 172 69.2
Migut.N02138 Erythranthe guttata HOM05D002930 ORTHO05D003283 2.3e-59 232.6 178 63.5
BcaC02g12557 Brassica carinata HOM05D002930 ORTHO05D003283 3.0e-59 232.3 172 65.7
PGR119G1041 Punica granatum HOM05D002930 ORTHO05D003283 5.2e-59 231.5 177 66.1
unitig_744.g24487 Utricularia gibba HOM05D002930 ORTHO05D003283 5.2e-59 231.5 181 64.1
A04p35160 Brassica napus HOM05D002930 ORTHO05D003283 6.7e-59 231.1 172 65.7
BraA04t18952Z Brassica rapa HOM05D002930 ORTHO05D003283 6.7e-59 231.1 172 65.7
ClCG09G006750 Citrullus lanatus HOM05D002930 ORTHO05D003283 6.7e-59 231.1 180 62.2
A05p00070 Brassica napus HOM05D002930 ORTHO05D003283 8.8e-59 230.7 172 65.1
BraA05t19003Z Brassica rapa HOM05D002930 ORTHO05D003283 8.8e-59 230.7 172 65.1
CsaV3_7G028480 Cucumis sativus L. HOM05D002930 ORTHO05D003283 8.8e-59 230.7 169 66.3
AT2G48060 Arabidopsis thaliana HOM05D002930 ORTHO05D003283 1.5e-58 229.9 172 65.1
MELO3C015874.2 Cucumis melo HOM05D002930 ORTHO05D003283 1.5e-58 229.9 169 65.7
Sed0024970 Sechium edule HOM05D002930 ORTHO05D003283 1.5e-58 229.9 166 68.1
Actinidia05730 Actinidia chinensis HOM05D002930 ORTHO05D003283 4.4e-58 228.4 170 67.6
BolC4t28786H Brassica oleracea HOM05D002930 ORTHO05D003283 4.4e-58 228.4 172 65.1
Lsat_1_v5_gn_8_55460 Lactuca sativa HOM05D002930 ORTHO05D003283 7.5e-58 227.6 171 66.7
SGA_v2.0_scaffold172G39040 Striga asiatica HOM05D002930 ORTHO05D003283 9.7e-58 227.3 178 64.0
Lj9C680G12 Lonicera japonica HOM05D002930 ORTHO05D003283 1.3e-57 226.9 181 64.6
Eucgr.B02004 Eucalyptus grandis HOM05D002930 ORTHO05D003283 2.2e-57 226.1 181 65.7
Manes.09G162700 Manihot esculenta HOM05D002930 ORTHO05D003283 2.2e-57 226.1 183 63.9
SalBow6G0735 Salvia bowleyana HOM05D002930 ORTHO05D003283 2.2e-57 226.1 180 62.8
Aa31LG10G16860 Aethionema arabicum HOM05D002930 ORTHO05D003283 2.8e-57 225.7 170 65.3
BolSC55t61233H Brassica oleracea HOM05D002930 ORTHO05D003283 2.8e-57 225.7 171 63.7
TPR.G33213 Trifolium pratense HOM05D002930 ORTHO05D003283 2.8e-57 225.7 175 66.9
DCAR_018381 Daucus carota HOM05D002930 ORTHO05D003283 3.7e-57 225.3 172 66.3
Lsat_1_v5_gn_9_1821 Lactuca sativa HOM05D002930 ORTHO05D003283 3.7e-57 225.3 181 59.7
PGR083G0736 Punica granatum HOM05D002930 ORTHO05D003283 3.7e-57 225.3 181 64.1
Sed0017862 Sechium edule HOM05D002930 ORTHO05D003283 3.7e-57 225.3 169 63.9
BNapus_Darmor_BZH_scaffold_188p00030 Brassica napus HOM05D002930 ORTHO05D003283 4.8e-57 224.9 171 63.7
BcaB02g08731 Brassica carinata HOM05D002930 ORTHO05D003283 6.3e-57 224.6 171 63.2
ECA247G2962 Erigeron canadensis HOM05D002930 ORTHO05D003283 1.1e-56 223.8 181 61.3
Gohir.A11G119600 Gossypium hirsutum HOM05D002930 ORTHO05D003283 1.4e-56 223.4 181 60.8
Gohir.D11G124400 Gossypium hirsutum HOM05D002930 ORTHO05D003283 1.4e-56 223.4 181 60.8
Gorai.007G133300 Gossypium raimondii HOM05D002930 ORTHO05D003283 1.4e-56 223.4 181 60.8
Medtr7g113930 Medicago truncatula HOM05D002930 ORTHO05D003283 1.4e-56 223.4 172 65.7
CSS0031973 Camellia sinensis var. sinensis HOM05D002930 ORTHO05D003283 5.3e-56 221.5 172 64.5
Cc02_g32570 Coffea canephora HOM05D002930 ORTHO05D003283 5.3e-56 221.5 177 66.7
Lj1g0027310 Lotus japonicus HOM05D002930 ORTHO05D003283 7.0e-56 221.1 177 62.7
DCAR_022250 Daucus carota HOM05D002930 ORTHO05D003283 1.6e-55 219.9 169 66.3
Glyma.19G238300 Glycine max HOM05D002930 ORTHO05D003283 2.0e-55 219.5 175 62.9
Psat3g009520 Pisum sativum HOM05D002930 ORTHO05D003283 2.7e-55 219.2 175 63.4
Lalb_Chr04g0260861 Lupinus albus HOM05D002930 ORTHO05D003283 1.3e-54 216.9 175 64.0
HPP92_025233 Vanilla planifolia HOM05D002930 ORTHO05D003283 1.3e-54 216.9 181 59.7
VMungo0540G0500 Vigna mungo HOM05D002930 ORTHO05D003283 6.5e-54 214.5 176 62.5
arahy.Tifrunner.gnm1.ann1.HQA39L Arachis hypogaea HOM05D002930 ORTHO05D003283 1.1e-53 213.8 172 62.8
arahy.Tifrunner.gnm1.ann1.MJP89X Arachis hypogaea HOM05D002930 ORTHO05D003283 1.1e-53 213.8 172 62.8
CANSAT54G0439 Cannabis sativa HOM05D002930 ORTHO05D003283 1.1e-53 213.8 174 62.1
HanXRQChr15g0466571 Helianthus annuus HOM05D002930 ORTHO05D003283 1.9e-53 213.0 181 60.8
Phvul.006G095000 Phaseolus vulgaris HOM05D002930 ORTHO05D003283 7.2e-53 211.1 174 62.1
COL.COLO4_13526 Corchorus olitorius HOM05D002930 ORTHO05D003283 4.0e-51 205.3 178 61.8
Thecc.05G299700 Theobroma cacao HOM05D002930 ORTHO05D003283 2.2e-49 199.5 178 60.7
Duzib177G0642 Durio zibethinus HOM05D002930 ORTHO05D003283 3.7e-49 198.7 178 61.2
SHI15439 Sapria himalayana HOM05D002930 ORTHO05D003283 5.4e-48 194.9 165 55.8
Gorai.013G123400 Gossypium raimondii HOM05D002930 ORTHO05D003283 5.0e-46 188.3 173 60.1
Ca_09378_v3 Cicer arietinum L. HOM05D002930 ORTHO05D003283 6.6e-46 188.0 146 66.4
Gohir.D13G110000 Gossypium hirsutum HOM05D002930 ORTHO05D003283 8.6e-46 187.6 173 59.5
Gohir.A13G106800 Gossypium hirsutum HOM05D002930 ORTHO05D003283 2.5e-45 186.0 173 59.0
Pp3c9_13300 Physcomitrium patens HOM05D002930 ORTHO05D003283 5.5e-45 184.9 176 54.0
HPP92_017201 Vanilla planifolia HOM05D002930 ORTHO05D003283 8.0e-44 181.0 158 59.5
Mapoly0023s0171 Marchantia polymorpha HOM05D002930 ORTHO05D003283 5.2e-43 178.3 181 53.0
Pp3c3_17170 Physcomitrium patens HOM05D002930 ORTHO05D003283 1.5e-42 176.8 181 48.6
AagrBONN_evm.TU.Sc2ySwM_228.583 Anthoceros agrestis HOM05D002930 ORTHO05D003283 4.4e-42 175.3 180 50.6
SMO358G0036 Selaginella moellendorffii HOM05D002930 ORTHO05D003283 3.6e-36 155.6 162 46.9
Dinv40246 Davidia involucrata HOM05D002930 ORTHO05D003283 2.0e-31 139.8 100 72.0
VMungo0647G1745 Vigna mungo HOM05D002930 ORTHO05D003283 1.1e-29 134.0 120 55.0
CBR_g45306 Chara braunii HOM05D002930 ORTHO05D000002 2.2e-25 119.8 208 38.5


User provided reference genes

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