Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy211s003 Aquilegia oxysepala HOM05D002930 ORTHO05D003283 1.9e-284 981.9 507 100.0
Aqoxy2G03186 Aquilegia oxysepala HOM05D002930 ORTHO05D003283 6.7e-274 946.8 491 99.6
TAR365G0233 Trochodendron aralioides HOM05D002930 ORTHO05D003283 1.9e-204 716.1 491 75.4
Dinv11268 Davidia involucrata HOM05D002930 ORTHO05D003283 4.2e-199 698.4 502 72.5
Nn3g21179 Nelumbo nucifera HOM05D002930 ORTHO05D003283 1.8e-194 682.9 492 73.0
Hma1.2p1_2318F.1_g319800 Hydrangea macrophylla HOM05D002930 ORTHO05D003283 4.0e-194 681.8 502 71.3
Haze_04772 Corylus avellana HOM05D002930 ORTHO05D003283 2.9e-192 675.6 491 71.7
CiPaw.07G096000 Carya illinoinensis HOM05D002930 ORTHO05D003283 1.0e-189 667.2 488 71.5
Cfa006078 Carpinus fangiana HOM05D002930 ORTHO05D003283 5.1e-189 664.8 490 71.0
QL12p022973 Quercus lobata HOM05D002930 ORTHO05D003283 5.7e-188 661.4 488 70.3
CSS0004978 Camellia sinensis var. sinensis HOM05D002930 ORTHO05D003283 3.7e-187 658.7 490 68.6
MBI19_g21645_MAGBIO Magnolia biondii HOM05D002930 ORTHO05D003283 8.2e-187 657.5 515 69.1
MD03G1271800 Malus domestica HOM05D002930 ORTHO05D003283 2.4e-186 656.0 503 68.6
Prupe.8G248000 Prunus persica HOM05D002930 ORTHO05D003283 3.1e-186 655.6 488 69.1
Gohir.D08G203100 Gossypium hirsutum HOM05D002930 ORTHO05D003283 2.6e-185 652.5 493 68.2
Gorai.004G215100 Gossypium raimondii HOM05D002930 ORTHO05D003283 4.5e-185 651.7 493 68.0
Potri.014G137200 Populus trichocarpa HOM05D002930 ORTHO05D003283 4.5e-185 651.7 493 68.6
Manes.05G071700 Manihot esculenta HOM05D002930 ORTHO05D003283 7.7e-185 651.0 494 68.4
Sabra14G0103600 Salix brachista HOM05D002930 ORTHO05D003283 5.0e-184 648.3 493 68.4
Duzib138G0507 Durio zibethinus HOM05D002930 ORTHO05D003283 6.5e-184 647.9 472 70.3
CSS0023451 Camellia sinensis var. sinensis HOM05D002930 ORTHO05D003283 1.9e-183 646.4 503 68.0
Oeu047489.1 Olea europaea HOM05D002930 ORTHO05D003283 3.2e-183 645.6 498 68.9
Atru.chr5.1328 Acer truncatum HOM05D002930 ORTHO05D003283 7.2e-183 644.4 493 68.8
Aqoxy5G00565 Aquilegia oxysepala HOM05D002930 ORTHO05D003283 2.1e-182 642.9 497 68.8
Cpa.g.sc9.131 Carica papaya HOM05D002930 ORTHO05D003283 6.1e-182 641.3 494 69.2
Dinv40246 Davidia involucrata HOM05D002930 ORTHO05D003283 2.3e-181 639.4 486 70.0
PSO170G5253 Papaver somniferum HOM05D002930 ORTHO05D003283 8.8e-181 637.5 501 68.1
MD11G1292400 Malus domestica HOM05D002930 ORTHO05D003283 1.1e-180 637.1 501 67.7
vmacro14944 Vaccinium macrocarpon HOM05D002930 ORTHO05D003283 4.3e-180 635.2 484 68.0
GSVIVG01011059001 Vitis vinifera HOM05D002930 ORTHO05D003283 2.8e-179 632.5 479 68.7
Thecc.01G286000 Theobroma cacao HOM05D002930 ORTHO05D003283 6.3e-179 631.3 496 66.9
Peaxi162Scf00941g00113 Petunia axillaris HOM05D002930 ORTHO05D003283 8.2e-179 630.9 493 67.7
Nitab4.5_0002927g0030 Nicotiana tabacum HOM05D002930 ORTHO05D003283 1.1e-178 630.6 500 68.2
SalBow6G0735 Salvia bowleyana HOM05D002930 ORTHO05D003283 9.1e-178 627.5 499 67.1
PSO302G0276 Papaver somniferum HOM05D002930 ORTHO05D003283 1.2e-177 627.1 501 67.1
Lalb_Chr21g0306621 Lupinus albus HOM05D002930 ORTHO05D003283 1.0e-176 624.0 491 67.2
MSTRG.17432 Avicennia marina HOM05D002930 ORTHO05D003283 2.2e-176 622.9 492 66.5
FAN15G2723 Fragaria x ananassa HOM05D002930 ORTHO05D003283 2.2e-176 622.9 490 67.1
Solyc09g074110.4 Solanum lycopersicum HOM05D002930 ORTHO05D003283 2.9e-176 622.5 499 66.3
Medtr1g089760 Medicago truncatula HOM05D002930 ORTHO05D003283 3.8e-176 622.1 489 66.9
TWI59G1251 Tripterygium wilfordii HOM05D002930 ORTHO05D003283 3.8e-176 622.1 488 66.2
CAN.G956.11 Capsicum annuum HOM05D002930 ORTHO05D003283 5.0e-176 621.7 499 66.3
FAN24G0623 Fragaria x ananassa HOM05D002930 ORTHO05D003283 1.9e-175 619.8 490 66.9
Sc05g0005220 Simmondsia chinensis HOM05D002930 ORTHO05D003283 1.9e-175 619.8 480 67.1
FvH4_2g24180 Fragaria vesca HOM05D002930 ORTHO05D003283 2.5e-175 619.4 490 66.9
PSO210G3942 Papaver somniferum HOM05D002930 ORTHO05D003283 2.5e-175 619.4 495 67.7
RcHm_v2.0_Chr6g0291991 Rosa chinensis HOM05D002930 ORTHO05D003283 2.5e-175 619.4 497 66.4
Lj9C680G12 Lonicera japonica HOM05D002930 ORTHO05D003283 4.2e-175 618.6 491 66.4
Sopen09g028930 Solanum pennellii HOM05D002930 ORTHO05D003283 5.5e-175 618.2 499 66.1
Sp4g29950 Schrenkiella parvula HOM05D002930 ORTHO05D003283 9.4e-175 617.5 502 66.5
FAN27G1593 Fragaria x ananassa HOM05D002930 ORTHO05D003283 1.2e-174 617.1 490 66.7
Psat6g169840 Pisum sativum HOM05D002930 ORTHO05D003283 4.7e-174 615.1 481 67.6
AL4G47650 Arabidopsis lyrata HOM05D002930 ORTHO05D003283 1.0e-173 614.0 502 66.3
CANSAT25G2793 Cannabis sativa HOM05D002930 ORTHO05D003283 1.4e-173 613.6 491 67.0
AT2G48060 Arabidopsis thaliana HOM05D002930 ORTHO05D003283 2.3e-173 612.8 502 65.7
THA.LOC104802222 Tarenaya hassleriana HOM05D002930 ORTHO05D003283 3.9e-173 612.1 496 66.7
Phvul.007G168500 Phaseolus vulgaris HOM05D002930 ORTHO05D003283 5.1e-173 611.7 486 66.9
Carub.0004s3076 Capsella rubella HOM05D002930 ORTHO05D003283 6.7e-173 611.3 502 65.5
Migut.N02138 Erythranthe guttata HOM05D002930 ORTHO05D003283 6.7e-173 611.3 505 64.8
BraA04t18952Z Brassica rapa HOM05D002930 ORTHO05D003283 8.8e-173 610.9 502 65.7
Thhalv10001278m.g Eutrema salsugineum HOM05D002930 ORTHO05D003283 8.8e-173 610.9 502 65.7
EL10Ac7g17191 Beta vulgaris HOM05D002930 ORTHO05D003283 1.5e-172 610.1 517 64.2
Glyma.10G023700 Glycine max HOM05D002930 ORTHO05D003283 2.0e-172 609.8 486 66.5
VMungo0720G1730 Vigna mungo HOM05D002930 ORTHO05D003283 3.3e-172 609.0 486 66.7
Glyma.02G150200 Glycine max HOM05D002930 ORTHO05D003283 9.7e-172 607.4 489 66.3
TPR.G13301 Trifolium pratense HOM05D002930 ORTHO05D003283 1.3e-171 607.1 486 66.7
BcaC02g12557 Brassica carinata HOM05D002930 ORTHO05D003283 1.7e-171 606.7 502 65.5
BolC4t28786H Brassica oleracea HOM05D002930 ORTHO05D003283 1.1e-170 604.0 503 65.6
Eucgr.H01545 Eucalyptus grandis HOM05D002930 ORTHO05D003283 3.1e-170 602.4 490 65.5
CSS0031973 Camellia sinensis var. sinensis HOM05D002930 ORTHO05D003283 7.0e-170 601.3 491 64.6
Lj5g0012178 Lotus japonicus HOM05D002930 ORTHO05D003283 1.2e-169 600.5 488 66.2
BNapus_Darmor_BZH_scaffold_188p00030 Brassica napus HOM05D002930 ORTHO05D003283 1.5e-169 600.1 502 64.7
BolSC55t61233H Brassica oleracea HOM05D002930 ORTHO05D003283 3.5e-169 599.0 502 64.5
Nitab4.5_0001323g0140 Nicotiana tabacum HOM05D002930 ORTHO05D003283 3.5e-169 599.0 505 65.5
BcaB02g08731 Brassica carinata HOM05D002930 ORTHO05D003283 1.0e-168 597.4 502 64.5
A05p00070 Brassica napus HOM05D002930 ORTHO05D003283 1.7e-168 596.7 502 64.7
BraA05t19003Z Brassica rapa HOM05D002930 ORTHO05D003283 1.7e-168 596.7 502 64.7
AUR62033688 Chenopodium quinoa HOM05D002930 ORTHO05D003283 1.7e-168 596.7 508 63.4
AUR62036777 Chenopodium quinoa HOM05D002930 ORTHO05D003283 1.7e-168 596.7 506 63.4
ClCG09G006750 Citrullus lanatus HOM05D002930 ORTHO05D003283 1.7e-168 596.7 499 64.7
ATR0626G265 Amborella trichopoda HOM05D002930 ORTHO05D003283 6.5e-168 594.7 497 63.0
MELO3C015874.2 Cucumis melo HOM05D002930 ORTHO05D003283 1.1e-167 594.0 497 64.6
HanXRQChr04g0117981 Helianthus annuus HOM05D002930 ORTHO05D003283 1.5e-167 593.6 476 68.3
SalBow3G3307 Salvia bowleyana HOM05D002930 ORTHO05D003283 1.5e-167 593.6 496 63.5
CsaV3_7G028480 Cucumis sativus L. HOM05D002930 ORTHO05D003283 4.2e-167 592.0 497 64.2
Aa31LG10G16860 Aethionema arabicum HOM05D002930 ORTHO05D003283 5.5e-167 591.7 472 67.2
arahy.Tifrunner.gnm1.ann1.M1RB0X Arachis hypogaea HOM05D002930 ORTHO05D003283 2.1e-166 589.7 494 64.4
Gohir.A11G119600 Gossypium hirsutum HOM05D002930 ORTHO05D003283 2.1e-166 589.7 493 63.9
Gorai.007G133300 Gossypium raimondii HOM05D002930 ORTHO05D003283 2.1e-166 589.7 493 63.7
Gohir.D11G124400 Gossypium hirsutum HOM05D002930 ORTHO05D003283 4.7e-166 588.6 493 63.7
SGA_v2.0_scaffold11G05785 Striga asiatica HOM05D002930 ORTHO05D003283 8.0e-166 587.8 500 64.6
SGA_v2.0_scaffold172G39040 Striga asiatica HOM05D002930 ORTHO05D003283 2.3e-165 586.3 494 64.0
Ah.08g212870 Amaranthus hybridus HOM05D002930 ORTHO05D003283 5.2e-165 585.1 509 62.1
ECA236G2879 Erigeron canadensis HOM05D002930 ORTHO05D003283 1.5e-164 583.6 498 64.7
Sed0024970 Sechium edule HOM05D002930 ORTHO05D003283 1.5e-164 583.6 497 62.8
Hund05360 Selenicereus undatus HOM05D002930 ORTHO05D003283 4.4e-164 582.0 512 61.9
PGR119G1041 Punica granatum HOM05D002930 ORTHO05D003283 7.4e-164 581.3 496 64.3
Sed0017862 Sechium edule HOM05D002930 ORTHO05D003283 2.2e-163 579.7 508 63.4
DCAR_018381 Daucus carota HOM05D002930 ORTHO05D003283 1.8e-162 576.6 505 61.6
Lsat_1_v5_gn_8_55460 Lactuca sativa HOM05D002930 ORTHO05D003283 4.1e-162 575.5 437 69.8
Lsat_1_v5_gn_9_1821 Lactuca sativa HOM05D002930 ORTHO05D003283 3.5e-161 572.4 454 66.1
Thecc.05G299700 Theobroma cacao HOM05D002930 ORTHO05D003283 5.9e-161 571.6 487 64.3
Aa31LG1G29470 Aethionema arabicum HOM05D002930 ORTHO05D003283 7.7e-161 571.2 502 63.9
Duzib177G0642 Durio zibethinus HOM05D002930 ORTHO05D003283 6.5e-160 568.2 498 63.9
Manes.09G162700 Manihot esculenta HOM05D002930 ORTHO05D003283 1.6e-158 563.5 488 62.5
Potri.005G037700 Populus trichocarpa HOM05D002930 ORTHO05D003283 6.1e-158 561.6 491 62.9
Sabra05G0038400 Salix brachista HOM05D002930 ORTHO05D003283 6.3e-155 551.6 491 62.1
Zm00001eb131990 Zea mays HOM05D002930 ORTHO05D003283 1.8e-154 550.1 444 64.4
unitig_744.g24487 Utricularia gibba HOM05D002930 ORTHO05D003283 1.3e-152 543.9 504 59.3
Actinidia05730 Actinidia chinensis HOM05D002930 ORTHO05D003283 3.8e-152 542.3 454 63.9
DCAR_012456 Daucus carota HOM05D002930 ORTHO05D003283 3.8e-152 542.3 503 59.8
PGR083G0736 Punica granatum HOM05D002930 ORTHO05D003283 5.0e-152 542.0 497 60.6
HPP92_025233 Vanilla planifolia HOM05D002930 ORTHO05D003283 1.1e-151 540.8 447 66.0
COL.COLO4_13526 Corchorus olitorius HOM05D002930 ORTHO05D003283 6.1e-150 535.0 474 62.2
CANSAT54G0439 Cannabis sativa HOM05D002930 ORTHO05D003283 2.3e-149 533.1 501 60.5
Gohir.D13G110000 Gossypium hirsutum HOM05D002930 ORTHO05D003283 2.3e-149 533.1 497 60.8
Gorai.013G123400 Gossypium raimondii HOM05D002930 ORTHO05D003283 2.3e-149 533.1 497 60.8
Cc02_g32570 Coffea canephora HOM05D002930 ORTHO05D003283 5.7e-148 528.5 441 62.6
Gohir.A13G106800 Gossypium hirsutum HOM05D002930 ORTHO05D003283 5.7e-148 528.5 497 60.4
Lj1A43T58 Lonicera japonica HOM05D002930 ORTHO05D003283 2.8e-147 526.2 396 69.2
TPR.G33213 Trifolium pratense HOM05D002930 ORTHO05D003283 8.3e-147 524.6 489 60.3
Medtr7g113930 Medicago truncatula HOM05D002930 ORTHO05D003283 2.3e-144 516.5 489 60.1
DCAR_022250 Daucus carota HOM05D002930 ORTHO05D003283 8.6e-144 514.6 464 60.8
HanXRQChr15g0466571 Helianthus annuus HOM05D002930 ORTHO05D003283 1.5e-143 513.8 503 56.7
Ciclev10018445m.g Citrus clementina HOM05D002930 ORTHO05D003283 1.9e-143 513.5 485 60.0
GSVIVG01022038001 Vitis vinifera HOM05D002930 ORTHO05D003283 9.5e-143 511.1 460 60.7
Phvul.006G095000 Phaseolus vulgaris HOM05D002930 ORTHO05D003283 1.2e-142 510.8 490 59.0
Lj1g0027310 Lotus japonicus HOM05D002930 ORTHO05D003283 2.8e-142 509.6 489 59.1
Lalb_Chr04g0260861 Lupinus albus HOM05D002930 ORTHO05D003283 2.8e-142 509.6 441 63.9
Glyma.19G238300 Glycine max HOM05D002930 ORTHO05D003283 8.9e-141 504.6 492 58.1
Psat3g009520 Pisum sativum HOM05D002930 ORTHO05D003283 9.8e-140 501.1 489 58.3
arahy.Tifrunner.gnm1.ann1.HQA39L Arachis hypogaea HOM05D002930 ORTHO05D003283 1.6e-137 493.8 469 60.6
arahy.Tifrunner.gnm1.ann1.MJP89X Arachis hypogaea HOM05D002930 ORTHO05D003283 4.6e-137 492.3 469 60.3
VMungo0540G0500 Vigna mungo HOM05D002930 ORTHO05D003283 1.3e-136 490.7 490 57.3
Hma1.2p1_0628F.1_g191750 Hydrangea macrophylla HOM05D002930 ORTHO05D003283 3.2e-130 469.5 502 55.2
Eucgr.B02004 Eucalyptus grandis HOM05D002930 ORTHO05D003283 9.5e-127 458.0 470 55.3
Ca_09378_v3 Cicer arietinum L. HOM05D002930 ORTHO05D003283 1.5e-116 424.1 465 54.8
arahy.Tifrunner.gnm1.ann1.K2UAY4 Arachis hypogaea HOM05D002930 ORTHO05D003283 2.2e-115 420.2 367 63.8
CARHR143440 Cardamine hirsuta HOM05D002930 ORTHO05D003283 7.8e-113 411.8 278 73.0
SHI15439 Sapria himalayana HOM05D002930 ORTHO05D003283 1.5e-111 407.5 512 49.8
Gohir.A08G184980 Gossypium hirsutum HOM05D002930 ORTHO05D003283 2.5e-111 406.8 264 74.6
Rhsim01G0277800 Rhododendron simsii HOM05D002930 ORTHO05D003283 4.9e-107 392.5 323 66.6
ECA247G2962 Erigeron canadensis HOM05D002930 ORTHO05D003283 8.4e-99 365.2 330 62.4
Mapoly0023s0171 Marchantia polymorpha HOM05D002930 ORTHO05D003283 6.9e-93 345.5 394 47.0
Pp3c9_13300 Physcomitrium patens HOM05D002930 ORTHO05D003283 1.5e-92 344.4 380 48.7
Pp3c3_17170 Physcomitrium patens HOM05D002930 ORTHO05D003283 3.8e-91 339.7 387 46.5
Actinidia21090 Actinidia chinensis HOM05D002930 ORTHO05D003283 4.6e-89 332.8 387 52.5
SMO358G0036 Selaginella moellendorffii HOM05D002930 ORTHO05D003283 3.9e-88 329.7 388 47.7
AagrBONN_evm.TU.Sc2ySwM_228.583 Anthoceros agrestis HOM05D002930 ORTHO05D003283 3.3e-87 326.6 392 45.4
QL03p004167 Quercus lobata HOM05D002930 ORTHO05D003283 2.1e-78 297.4 324 54.9
CBR_g45306 Chara braunii HOM05D002930 ORTHO05D000002 9.7e-71 271.9 385 41.8
HPP92_017201 Vanilla planifolia HOM05D002930 ORTHO05D003283 2.5e-63 247.3 509 37.5
CDE08G1581 Ceratophyllum demersum HOM05D002930 ORTHO05D003283 1.7e-54 218.0 279 49.8
Gohir.A08G184940 Gossypium hirsutum HOM05D002930 ORTHO05D003283 1.3e-43 181.8 190 56.3
Rhsim01G0277700 Rhododendron simsii HOM05D002930 ORTHO05D003283 6.3e-38 162.9 120 62.5
Actinidia24871 Actinidia chinensis HOM05D002930 ORTHO05D003283 3.4e-31 140.6 97 62.9
Ah.04g159840 Amaranthus hybridus HOM05D002930 ORTHO05D003283 3.8e-27 127.1 125 52.0
A01p00010 Brassica napus HOM05D002930 ORTHO05D003283 7.5e-07 59.7 151 32.5


User provided reference genes

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