Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G04296 Aquilegia oxysepala HOM05D005351 ORTHO05D006542 0.0e+00 1706.0 960 100.0
TAR626G0279 Trochodendron aralioides HOM05D005351 ORTHO05D006542 2.9e-161 573.5 1048 42.9
Nn1g02046 Nelumbo nucifera HOM05D005351 ORTHO05D006542 2.5e-144 517.3 1065 38.9
Nn3g19476 Nelumbo nucifera HOM05D005351 ORTHO05D006542 1.1e-139 501.9 980 39.2
PSO210G4843 Papaver somniferum HOM05D005351 ORTHO05D006542 1.9e-136 491.1 989 42.0
PSO210G4950 Papaver somniferum HOM05D005351 ORTHO05D006542 4.7e-135 486.5 994 41.9
CSS0045517 Camellia sinensis var. sinensis HOM05D005351 ORTHO05D006542 1.8e-134 484.6 1025 38.2
CSS0029070 Camellia sinensis var. sinensis HOM05D005351 ORTHO05D006542 1.5e-133 481.5 1025 38.1
Haze_09867 Corylus avellana HOM05D005351 ORTHO05D006542 8.3e-132 475.7 1022 39.3
Cfa021891 Carpinus fangiana HOM05D005351 ORTHO05D006542 1.1e-128 465.3 1022 38.6
Prupe.6G028400 Prunus persica HOM05D005351 ORTHO05D006542 2.1e-127 461.1 921 40.3
MD03G1035400 Malus domestica HOM05D005351 ORTHO05D006542 5.8e-125 453.0 921 38.7
RcHm_v2.0_Chr5g0075571 Rosa chinensis HOM05D005351 ORTHO05D006542 2.2e-124 451.1 923 39.3
Actinidia03651 Actinidia chinensis HOM05D005351 ORTHO05D006542 4.6e-122 443.4 1005 37.5
Sabra16G0244200 Salix brachista HOM05D005351 ORTHO05D006542 2.3e-121 441.0 1026 37.7
MD11G1037100 Malus domestica HOM05D005351 ORTHO05D006542 9.6e-120 435.6 1006 37.2
Dinv40885 Davidia involucrata HOM05D005351 ORTHO05D006542 1.8e-118 431.4 983 38.1
Duzib213G0009 Durio zibethinus HOM05D005351 ORTHO05D006542 3.1e-118 430.6 1023 37.1
Manes.01G003500 Manihot esculenta HOM05D005351 ORTHO05D006542 2.7e-114 417.5 1000 37.4
QL08p002685 Quercus lobata HOM05D005351 ORTHO05D006542 1.0e-113 415.6 950 38.3
FAN11G1247 Fragaria x ananassa HOM05D005351 ORTHO05D006542 3.0e-113 414.1 1005 36.3
FAN16G2746 Fragaria x ananassa HOM05D005351 ORTHO05D006542 3.3e-112 410.6 1000 36.2
CiPaw.12G140700 Carya illinoinensis HOM05D005351 ORTHO05D006542 7.3e-112 409.5 809 40.8
Gohir.A04G005700 Gossypium hirsutum HOM05D005351 ORTHO05D006542 7.3e-112 409.5 1013 36.3
Gorai.009G450800 Gossypium raimondii HOM05D005351 ORTHO05D006542 7.3e-112 409.5 1015 36.0
vmacro09623 Vaccinium macrocarpon HOM05D005351 ORTHO05D006542 1.3e-111 408.7 991 37.5
GSVIVG01014743001 Vitis vinifera HOM05D005351 ORTHO05D006542 1.6e-111 408.3 982 34.7
MBI14_g37362_MAGBIO Magnolia biondii HOM05D005351 ORTHO05D006542 2.1e-111 407.9 981 37.5
FAN25G1298 Fragaria x ananassa HOM05D005351 ORTHO05D006542 3.6e-111 407.1 994 36.2
FAN21G2745 Fragaria x ananassa HOM05D005351 ORTHO05D006542 3.1e-110 404.1 998 36.5
Gohir.D05G384000 Gossypium hirsutum HOM05D005351 ORTHO05D006542 6.9e-110 402.9 1018 35.6
Potri.001G371600 Populus trichocarpa HOM05D005351 ORTHO05D006542 2.6e-109 401.0 861 38.1
Thecc.07G007900 Theobroma cacao HOM05D005351 ORTHO05D006542 1.3e-108 398.7 1025 35.2
TWI38G2212 Tripterygium wilfordii HOM05D005351 ORTHO05D006542 3.8e-108 397.1 1046 34.2
COL.COLO4_07741 Corchorus olitorius HOM05D005351 ORTHO05D006542 1.1e-104 385.6 1017 35.1
Rhsim04G0010500 Rhododendron simsii HOM05D005351 ORTHO05D006542 2.5e-104 384.4 1125 34.3
Cc05_g15290 Coffea canephora HOM05D005351 ORTHO05D006542 7.4e-104 382.9 1005 35.7
Lj6g0009098 Lotus japonicus HOM05D005351 ORTHO05D006542 2.8e-103 380.9 1015 35.7
Nitab4.5_0003328g0090 Nicotiana tabacum HOM05D005351 ORTHO05D006542 8.1e-103 379.4 990 35.8
TWI38G1324 Tripterygium wilfordii HOM05D005351 ORTHO05D006542 1.1e-102 379.0 1030 35.1
Nitab4.5_0005478g0030 Nicotiana tabacum HOM05D005351 ORTHO05D006542 1.8e-102 378.3 1000 35.6
Ciclev10007493m.g Citrus clementina HOM05D005351 ORTHO05D006542 2.2e-100 371.3 839 37.3
Sed0019267 Sechium edule HOM05D005351 ORTHO05D006542 3.2e-99 367.5 1015 35.5
CAN.G492.50 Capsicum annuum HOM05D005351 ORTHO05D006542 1.2e-98 365.5 997 35.0
Medtr3g461030 Medicago truncatula HOM05D005351 ORTHO05D006542 1.2e-98 365.5 1017 34.8
PGSC0003DMG400014404 Solanum tuberosum HOM05D005351 ORTHO05D006542 2.7e-98 364.4 1004 34.9
VMungo0540G1402 Vigna mungo HOM05D005351 ORTHO05D006542 2.7e-98 364.4 1013 33.4
CANSAT11G0508 Cannabis sativa HOM05D005351 ORTHO05D006542 4.6e-98 363.6 870 35.7
HanXRQChr11g0334131 Helianthus annuus HOM05D005351 ORTHO05D006542 7.9e-98 362.8 970 35.1
TPR.G17956 Trifolium pratense HOM05D005351 ORTHO05D006542 7.9e-98 362.8 1014 35.5
Phvul.006G059260 Phaseolus vulgaris HOM05D005351 ORTHO05D006542 1.9e-96 358.2 1032 33.0
Cpa.g.sc12.108 Carica papaya HOM05D005351 ORTHO05D006542 3.3e-96 357.5 982 33.8
SalBow8G3039 Salvia bowleyana HOM05D005351 ORTHO05D006542 1.6e-95 355.1 1013 34.6
Migut.M01635 Erythranthe guttata HOM05D005351 ORTHO05D006542 2.1e-95 354.8 989 35.1
Lalb_Chr15g0082311 Lupinus albus HOM05D005351 ORTHO05D006542 2.8e-95 354.4 1024 33.5
Ca_12455_v3 Cicer arietinum L. HOM05D005351 ORTHO05D006542 8.2e-95 352.8 1018 33.1
PGR083G0334 Punica granatum HOM05D005351 ORTHO05D006542 8.2e-95 352.8 1039 33.7
AUR62017130 Chenopodium quinoa HOM05D005351 ORTHO05D006542 1.8e-94 351.7 1047 33.7
CsaV3_7G023840 Cucumis sativus L. HOM05D005351 ORTHO05D006542 3.1e-94 350.9 1029 34.0
DCAR_013254 Daucus carota HOM05D005351 ORTHO05D006542 4.0e-94 350.5 1006 35.1
Lj8A180G96 Lonicera japonica HOM05D005351 ORTHO05D006542 4.0e-94 350.5 1022 34.2
AUR62035679 Chenopodium quinoa HOM05D005351 ORTHO05D006542 9.0e-94 349.4 1031 33.6
Oeu049420.1 Olea europaea HOM05D005351 ORTHO05D006542 7.6e-93 346.3 1024 34.0
Sopen10g001810 Solanum pennellii HOM05D005351 ORTHO05D006542 1.7e-92 345.1 907 35.4
SGA_v2.0_scaffold168G38576 Striga asiatica HOM05D005351 ORTHO05D006542 1.7e-92 345.1 838 35.6
AT3G13225 Arabidopsis thaliana HOM05D005351 ORTHO05D006542 4.9e-92 343.6 1016 32.3
Glyma.08G332700 Glycine max HOM05D005351 ORTHO05D006542 6.5e-92 343.2 855 35.4
Hund23091 Selenicereus undatus HOM05D005351 ORTHO05D006542 1.2e-90 339.0 1024 33.2
THA.LOC104815687 Tarenaya hassleriana HOM05D005351 ORTHO05D006542 2.7e-90 337.8 994 32.1
ClCG09G021540 Citrullus lanatus HOM05D005351 ORTHO05D006542 4.6e-90 337.0 1011 33.1
Eucgr.F02026 Eucalyptus grandis HOM05D005351 ORTHO05D006542 6.1e-90 336.7 835 36.4
Psat5g166400 Pisum sativum HOM05D005351 ORTHO05D006542 2.3e-89 334.7 1052 32.7
Solyc10g005850.4 Solanum lycopersicum HOM05D005351 ORTHO05D006542 2.3e-89 334.7 909 35.5
Dinv10362 Davidia involucrata HOM05D005351 ORTHO05D006542 5.1e-89 333.6 876 36.2
Ah.06g181500 Amaranthus hybridus HOM05D005351 ORTHO05D006542 8.7e-89 332.8 1019 32.0
Atru.chr2.3836 Acer truncatum HOM05D005351 ORTHO05D006542 1.9e-88 331.6 767 37.9
Peaxi162Scf00018g00155 Petunia axillaris HOM05D005351 ORTHO05D006542 1.3e-87 328.9 854 35.1
ATR0751G017 Amborella trichopoda HOM05D005351 ORTHO05D006542 1.6e-87 328.6 1070 32.2
Glyma.18G074300 Glycine max HOM05D005351 ORTHO05D006542 1.4e-86 325.5 906 34.4
ECA236G3149 Erigeron canadensis HOM05D005351 ORTHO05D006542 2.0e-85 321.6 993 33.1
Zm00001eb381020 Zea mays HOM05D005351 ORTHO05D006542 2.0e-85 321.6 973 34.4
FvH4_3g42241 Fragaria vesca HOM05D005351 ORTHO05D006542 1.0e-84 319.3 934 34.7
Carub.0003s1261 Capsella rubella HOM05D005351 ORTHO05D006542 1.3e-84 318.9 1014 32.9
Sp3g11430 Schrenkiella parvula HOM05D005351 ORTHO05D006542 9.4e-83 312.8 999 32.1
BraA01t04066Z Brassica rapa HOM05D005351 ORTHO05D006542 3.9e-81 307.4 1005 31.9
Os06g0298400 Oryza sativa ssp. japonica HOM05D005351 ORTHO05D006542 3.9e-81 307.4 986 33.6
BolC1t05130H Brassica oleracea HOM05D005351 ORTHO05D006542 6.7e-81 306.6 1000 32.6
BcaC09g48295 Brassica carinata HOM05D005351 ORTHO05D006542 1.1e-80 305.8 1000 32.6
A01p40300 Brassica napus HOM05D005351 ORTHO05D006542 4.3e-80 303.9 918 32.9
C01p51820 Brassica napus HOM05D005351 ORTHO05D006542 5.7e-80 303.5 916 33.7
EL10Ac4g07541 Beta vulgaris HOM05D005351 ORTHO05D006542 2.8e-79 301.2 1063 32.5
MSTRG.15808 Avicennia marina HOM05D005351 ORTHO05D006542 3.7e-79 300.8 1023 32.6
BcaB04g21006 Brassica carinata HOM05D005351 ORTHO05D006542 5.3e-78 297.0 994 30.8
Hma1.2p1_0193F.1_g083920 Hydrangea macrophylla HOM05D005351 ORTHO05D006542 6.9e-78 296.6 1016 32.0
unitig_0.g707 Utricularia gibba HOM05D005351 ORTHO05D006542 5.9e-77 293.5 1005 30.7
AL3G25030 Arabidopsis lyrata HOM05D005351 ORTHO05D006542 1.9e-75 288.5 839 32.5
SEGI_31992 Sequoiadendron giganteum HOM05D005351 ORTHO05D006542 4.2e-75 287.3 1123 31.4
HPP92_017874 Vanilla planifolia HOM05D005351 ORTHO05D006542 9.4e-75 286.2 956 31.9
Aa31LG8G460 Aethionema arabicum HOM05D005351 ORTHO05D006542 1.6e-74 285.4 995 30.8
CARHR087840 Cardamine hirsuta HOM05D005351 ORTHO05D006542 7.9e-74 283.1 851 31.3
Thhalv10020110m.g Eutrema salsugineum HOM05D005351 ORTHO05D006542 3.0e-73 281.2 858 30.4
arahy.Tifrunner.gnm1.ann1.1R5J8M Arachis hypogaea HOM05D005351 ORTHO05D006542 6.7e-73 280.0 990 33.1
CDE05G2589 Ceratophyllum demersum HOM05D005351 ORTHO05D006542 5.0e-68 263.8 999 30.1
Lsat_1_v5_gn_7_114900 Lactuca sativa HOM05D005351 ORTHO05D006542 1.9e-67 261.9 887 32.2
Sc03g0011530 Simmondsia chinensis HOM05D005351 ORTHO05D006542 9.4e-67 259.6 603 38.3
Zm00001eb281160 Zea mays HOM05D005351 ORTHO05D006542 1.5e-64 252.3 949 31.4
arahy.Tifrunner.gnm1.ann1.LDHF9L Arachis hypogaea HOM05D005351 ORTHO05D006542 4.8e-63 247.3 990 31.9
MELO3C024969.2 Cucumis melo HOM05D005351 ORTHO05D006542 3.8e-60 237.7 938 30.5
PSO782G2183 Papaver somniferum HOM05D005351 ORTHO05D006542 1.0e-52 213.0 154 70.1
Oeu017994.1 Olea europaea HOM05D005351 ORTHO05D006542 7.0e-46 190.3 230 54.3
CDE05G0998 Ceratophyllum demersum HOM05D005351 ORTHO05D006542 2.0e-45 188.7 878 27.4
MBI14_g27041_MAGBIO Magnolia biondii HOM05D005351 ORTHO05D006542 3.5e-45 188.0 155 65.8
CSS0028997 Camellia sinensis var. sinensis HOM05D005351 ORTHO05D006542 9.5e-43 179.9 409 33.0
CSS0030315 Camellia sinensis var. sinensis HOM05D005351 ORTHO05D006542 4.7e-42 177.6 409 32.8
Actinidia00844 Actinidia chinensis HOM05D005351 ORTHO05D006542 4.7e-34 151.0 467 33.4
CBR_g12012 Chara braunii HOM05D005351 ORTHO05D006542 1.3e-31 142.9 237 43.0
AagrBONN_evm.TU.Sc2ySwM_368.1722__1723 Anthoceros agrestis HOM05D005351 ORTHO05D006542 2.4e-30 138.7 1112 25.4
PSO782G1978 Papaver somniferum HOM05D005351 ORTHO05D006542 2.0e-29 135.6 451 36.4
SMO164G0196 Selaginella moellendorffii HOM05D005351 ORTHO05D006542 4.6e-29 134.4 158 53.8
Pp3c7_8580 Physcomitrium patens HOM05D005351 ORTHO05D006542 3.9e-28 131.3 1017 24.7
HPP92_028497 Vanilla planifolia HOM05D005351 ORTHO05D006542 1.1e-25 123.2 162 45.1
vmacro11082 Vaccinium macrocarpon HOM05D000009 ORTHO05D006542 3.4e-24 118.2 100 64.0
AagrBONN_evm.TU.Sc2ySwM_368.1723 Anthoceros agrestis HOM05D005351 ORTHO05D006542 2.6e-16 92.0 134 48.5
Hma1.2p1_3473F.1_g336240 Hydrangea macrophylla HOM05D005351 ORTHO05D006542 2.6e-16 92.0 311 34.1
Dinv10361 Davidia involucrata HOM05D005351 ORTHO05D006542 3.4e-16 91.7 75 56.0
Lsat_1_v5_gn_6_88041 Lactuca sativa HOM05D005351 ORTHO05D006542 1.9e-14 85.9 252 30.2
Cre09.g388430 Chlamydomonas reinhardtii HOM05D005351 ORTHO05D006542 5.1e-12 77.8 187 31.0
Cc00_g23250 Coffea canephora HOM05D000874 ORTHO05D001049 9.3e-06 57.0 45 53.3


User provided reference genes

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