Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G04073 Aquilegia oxysepala HOM05D000701 ORTHO05D000531 1.6e-46 189.1 98 100.0
Aqoxy1G04077 Aquilegia oxysepala HOM05D000701 ORTHO05D000531 4.8e-27 124.4 80 83.8
Aqoxy1G04075 Aquilegia oxysepala HOM05D000701 ORTHO05D000531 5.5e-23 110.9 77 75.3
Aqoxy1G04074 Aquilegia oxysepala HOM05D000701 ORTHO05D000531 1.2e-22 109.8 77 75.3
Aqoxy1G04076 Aquilegia oxysepala HOM05D000701 ORTHO05D000531 1.6e-22 109.4 77 75.3
Aqoxy2G01275 Aquilegia oxysepala HOM05D000701 ORTHO05D000531 1.1e-10 70.1 81 43.2
Aqoxy2G01278 Aquilegia oxysepala HOM05D000701 ORTHO05D000531 2.7e-09 65.5 79 45.6
PSO384G2335 Papaver somniferum HOM05D000701 ORTHO05D000531 4.5e-09 64.7 74 41.9
MD11G1208100 Malus domestica HOM05D000701 ORTHO05D000531 5.9e-09 64.3 77 41.6
MD03G1191200 Malus domestica HOM05D000701 ORTHO05D000531 7.7e-09 63.9 74 43.2
Eucgr.D01403 Eucalyptus grandis HOM05D000701 ORTHO05D000531 2.9e-08 62.0 80 37.5
Nn1g07380 Nelumbo nucifera HOM05D000701 ORTHO05D000531 3.8e-08 61.6 79 39.2
Prupe.4G227200 Prunus persica HOM05D000701 ORTHO05D000531 5.0e-08 61.2 66 43.9
Aqoxy1G04087 Aquilegia oxysepala HOM05D000701 ORTHO05D000531 6.5e-08 60.8 74 39.2
Prupe.4G227400 Prunus persica HOM05D000701 ORTHO05D000531 8.5e-08 60.5 66 43.9
QL02p033861 Quercus lobata HOM05D000701 ORTHO05D000531 8.5e-08 60.5 73 45.2
Aqoxy2G01267 Aquilegia oxysepala HOM05D000701 ORTHO05D000531 1.5e-07 59.7 79 43.0
CANSAT11G1543 Cannabis sativa HOM05D000701 ORTHO05D000531 1.5e-07 59.7 79 39.2
CANSAT80G0766 Cannabis sativa HOM05D000701 ORTHO05D000531 1.5e-07 59.7 71 42.3
Gohir.D06G159800 Gossypium hirsutum HOM05D000701 ORTHO05D000531 1.9e-07 59.3 75 40.0
Gorai.010G186500 Gossypium raimondii HOM05D000701 ORTHO05D000531 1.9e-07 59.3 75 40.0
Manes.07G059566 Manihot esculenta HOM05D000701 ORTHO05D000531 1.9e-07 59.3 101 38.6
QL08p008124 Quercus lobata HOM05D000701 ORTHO05D000531 2.5e-07 58.9 81 40.7
Aqoxy1G04068 Aquilegia oxysepala HOM05D000701 ORTHO05D000531 3.2e-07 58.5 76 43.4
Eucgr.D01408 Eucalyptus grandis HOM05D000701 ORTHO05D000531 3.2e-07 58.5 74 36.5
Eucgr.D01409 Eucalyptus grandis HOM05D000701 ORTHO05D000531 3.2e-07 58.5 74 36.5
FAN26G3459 Fragaria x ananassa HOM05D000701 ORTHO05D000531 3.2e-07 58.5 74 40.5
Cfa020261 Carpinus fangiana HOM05D000701 ORTHO05D000531 4.2e-07 58.2 79 36.7
FAN16G0669 Fragaria x ananassa HOM05D000701 ORTHO05D000531 4.2e-07 58.2 74 39.2
FAN25G3243 Fragaria x ananassa HOM05D000701 ORTHO05D000531 4.2e-07 58.2 74 39.2
Gohir.D05G377066 Gossypium hirsutum HOM05D000701 ORTHO05D000531 5.5e-07 57.8 76 42.1
Gorai.009G444800 Gossypium raimondii HOM05D000701 ORTHO05D000531 5.5e-07 57.8 76 42.1
Manes.07G059600 Manihot esculenta HOM05D000701 ORTHO05D000531 5.5e-07 57.8 101 37.6
TAR627G0799 Trochodendron aralioides HOM05D000701 ORTHO05D000531 5.5e-07 57.8 79 36.7
TAR627G1149 Trochodendron aralioides HOM05D000701 ORTHO05D000531 5.5e-07 57.8 79 36.7
Cfa020262 Carpinus fangiana HOM05D000701 ORTHO05D000531 7.2e-07 57.4 79 38.0
FvH4_1g25220 Fragaria vesca HOM05D000701 ORTHO05D000531 7.2e-07 57.4 74 39.2
FAN19G2138 Fragaria x ananassa HOM05D000701 ORTHO05D000531 7.2e-07 57.4 74 39.2
Manes.07G059500 Manihot esculenta HOM05D000701 ORTHO05D000531 7.2e-07 57.4 101 37.6
Manes.07G059533 Manihot esculenta HOM05D000701 ORTHO05D000531 7.2e-07 57.4 101 37.6
Aqoxy4G02503 Aquilegia oxysepala HOM05D000701 ORTHO05D000531 9.4e-07 57.0 80 41.2
CARHR161630 Cardamine hirsuta HOM05D000701 ORTHO05D000531 9.4e-07 57.0 78 32.1
FvH4_2g09840 Fragaria vesca HOM05D000701 ORTHO05D000531 9.4e-07 57.0 77 35.1
Gohir.A06G153160 Gossypium hirsutum HOM05D000701 ORTHO05D000531 9.4e-07 57.0 75 38.7
Atru.chr11.2548 Acer truncatum HOM05D000701 ORTHO05D000531 1.2e-06 56.6 67 46.3
Eucgr.D00093 Eucalyptus grandis HOM05D000701 ORTHO05D000531 1.2e-06 56.6 68 38.2
FAN28G1750 Fragaria x ananassa HOM05D000701 ORTHO05D000531 1.2e-06 56.6 74 36.5
Lj8A174T72 Lonicera japonica HOM05D000701 ORTHO05D000531 1.2e-06 56.6 79 35.4
PGR031G1301 Punica granatum HOM05D000701 ORTHO05D000531 1.2e-06 56.6 77 39.0
RcHm_v2.0_Chr2g0123131 Rosa chinensis HOM05D000701 ORTHO05D000531 1.2e-06 56.6 74 37.8
TAR627G0292 Trochodendron aralioides HOM05D000701 ORTHO05D000531 1.2e-06 56.6 77 36.4
Aqoxy1G04072 Aquilegia oxysepala HOM05D000701 ORTHO05D000531 1.6e-06 56.2 76 38.2
DCAR_017101 Daucus carota HOM05D000701 ORTHO05D000531 1.6e-06 56.2 82 35.4
FAN23G2306 Fragaria x ananassa HOM05D000701 ORTHO05D000531 1.6e-06 56.2 74 39.2
FAN27G1429 Fragaria x ananassa HOM05D000701 ORTHO05D000531 1.6e-06 56.2 79 34.2
Haze_06924 Corylus avellana HOM05D000701 ORTHO05D000531 2.7e-06 55.5 75 38.7
HanXRQChr16g0516631 Helianthus annuus HOM05D000701 ORTHO05D000531 2.7e-06 55.5 80 36.2
RcHm_v2.0_Chr2g0161741 Rosa chinensis HOM05D000701 ORTHO05D000531 2.7e-06 55.5 83 36.1
Ca_14773_v3 Cicer arietinum L. HOM05D000701 ORTHO05D000531 3.6e-06 55.1 81 35.8
Migut.L00464 Erythranthe guttata HOM05D000701 ORTHO05D000531 3.6e-06 55.1 74 35.1
Eucgr.E03930 Eucalyptus grandis HOM05D000701 ORTHO05D000531 3.6e-06 55.1 84 40.5
Psat5g172720 Pisum sativum HOM05D000701 ORTHO05D000531 3.6e-06 55.1 81 39.5
Dinv40810 Davidia involucrata HOM05D000701 ORTHO05D000531 4.7e-06 54.7 80 35.0
Hma1.2p1_0345F.1_g131310 Hydrangea macrophylla HOM05D000701 ORTHO05D000531 4.7e-06 54.7 71 35.2
PSO782G1272 Papaver somniferum HOM05D000701 ORTHO05D000531 4.7e-06 54.7 71 38.0
Potri.009G055100 Populus trichocarpa HOM05D000701 ORTHO05D000531 4.7e-06 54.7 77 36.4
RcHm_v2.0_Chr1g0318551 Rosa chinensis HOM05D000701 ORTHO05D000531 4.7e-06 54.7 78 37.2
Sopen11g007030 Solanum pennellii HOM05D000701 ORTHO05D000531 4.7e-06 54.7 77 37.7
Aqoxy4G02505 Aquilegia oxysepala HOM05D000701 ORTHO05D000531 6.1e-06 54.3 80 40.0
AL5G32480 Arabidopsis lyrata HOM05D000701 ORTHO05D000531 6.1e-06 54.3 78 32.1
arahy.Tifrunner.gnm1.ann1.61HQPG Arachis hypogaea HOM05D000701 ORTHO05D000531 6.1e-06 54.3 78 37.2
Cpa.g.sc197.28 Carica papaya HOM05D000701 ORTHO05D000531 6.1e-06 54.3 72 36.1
AUR62015914 Chenopodium quinoa HOM05D000701 ORTHO05D000531 6.1e-06 54.3 74 39.2
Rhsim02G0097400 Rhododendron simsii HOM05D000701 ORTHO05D000531 6.1e-06 54.3 74 39.2
Sabra09G0040300 Salix brachista HOM05D000701 ORTHO05D000531 6.1e-06 54.3 77 35.1
Thecc.07G025300 Theobroma cacao HOM05D000701 ORTHO05D000531 6.1e-06 54.3 73 35.6
Thecc.07G025400 Theobroma cacao HOM05D000701 ORTHO05D000531 6.1e-06 54.3 80 41.2
Haze_06919 Corylus avellana HOM05D000701 ORTHO05D000531 8.0e-06 53.9 75 38.7
Haze_09758 Corylus avellana HOM05D000701 ORTHO05D000531 8.0e-06 53.9 79 35.4
Dinv22220 Davidia involucrata HOM05D000701 ORTHO05D000531 8.0e-06 53.9 76 32.9
Gohir.D05G377132 Gossypium hirsutum HOM05D000701 ORTHO05D000531 8.0e-06 53.9 79 38.0
Lsat_1_v5_gn_4_62200 Lactuca sativa HOM05D000701 ORTHO05D000531 8.0e-06 53.9 78 34.6
LjContig00272g0025521 Lotus japonicus HOM05D000701 ORTHO05D000531 8.0e-06 53.9 72 34.7
Medtr3g055380 Medicago truncatula HOM05D000701 ORTHO05D000531 8.0e-06 53.9 78 39.7
Oeu041967.2 Olea europaea HOM05D000701 ORTHO05D000531 8.0e-06 53.9 75 37.3
RcHm_v2.0_Chr6g0266251 Rosa chinensis HOM05D000701 ORTHO05D000531 8.0e-06 53.9 74 35.1
SHI26564 Sapria himalayana HOM05D001954 ORTHO05D001966 8.0e-06 53.9 74 36.5
Solyc11g012260.3 Solanum lycopersicum HOM05D000701 ORTHO05D000531 8.0e-06 53.9 77 37.7


User provided reference genes

Program Settings