Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G04030 Aquilegia oxysepala HOM05D005997 ORTHO05D008323 1.3e-162 576.2 282 100.0
TAR624G0829 Trochodendron aralioides HOM05D005997 ORTHO05D008323 6.7e-114 414.5 268 75.7
Duzib213G0008 Durio zibethinus HOM05D005997 ORTHO05D008323 2.1e-107 392.9 245 77.1
Gohir.D01G072400 Gossypium hirsutum HOM05D005997 ORTHO05D008323 3.6e-107 392.1 291 68.7
Potri.008G180300 Populus trichocarpa HOM05D005997 ORTHO05D008323 5.1e-106 388.3 261 72.0
Gorai.002G095400 Gossypium raimondii HOM05D005997 ORTHO05D008323 6.7e-106 387.9 291 68.0
Thecc.07G024000 Theobroma cacao HOM05D005997 ORTHO05D008323 1.5e-105 386.7 284 69.7
Gohir.A01G086200 Gossypium hirsutum HOM05D005997 ORTHO05D008323 2.0e-105 386.3 281 68.7
COL.COLO4_09766 Corchorus olitorius HOM05D005997 ORTHO05D008323 6.3e-104 381.3 236 78.0
Actinidia00103 Actinidia chinensis HOM05D005997 ORTHO05D008323 8.2e-104 380.9 255 72.5
Sabra08G0137600 Salix brachista HOM05D005997 ORTHO05D008323 8.2e-104 380.9 264 70.1
CAN.G337.36 Capsicum annuum HOM05D005997 ORTHO05D008323 1.1e-103 380.6 252 72.6
Hma1.2p1_0036F.1_g022850 Hydrangea macrophylla HOM05D005997 ORTHO05D008323 1.1e-103 380.6 250 72.4
PGSC0003DMG400022292 Solanum tuberosum HOM05D005997 ORTHO05D008323 1.1e-103 380.6 278 68.0
Nitab4.5_0001160g0200 Nicotiana tabacum HOM05D005997 ORTHO05D008323 1.4e-103 380.2 286 67.1
CANSAT11G0206 Cannabis sativa HOM05D005997 ORTHO05D008323 1.8e-103 379.8 268 70.9
RcHm_v2.0_Chr5g0042111 Rosa chinensis HOM05D005997 ORTHO05D008323 1.8e-103 379.8 252 73.8
Eucgr.F03518 Eucalyptus grandis HOM05D005997 ORTHO05D008323 5.3e-103 378.3 267 70.8
FAN21G1688 Fragaria x ananassa HOM05D005997 ORTHO05D008323 7.0e-103 377.9 251 73.7
Nitab4.5_0010102g0010 Nicotiana tabacum HOM05D005997 ORTHO05D008323 7.0e-103 377.9 286 66.8
Solyc07g065180.3 Solanum lycopersicum HOM05D005997 ORTHO05D008323 9.1e-103 377.5 270 68.9
Dinv40826 Davidia involucrata HOM05D005997 ORTHO05D008323 2.6e-102 375.9 270 69.3
RcHm_v2.0_Chr5g0042181 Rosa chinensis HOM05D005997 ORTHO05D008323 2.6e-102 375.9 240 75.8
Ciclev10009024m.g Citrus clementina HOM05D005997 ORTHO05D008323 3.5e-102 375.6 262 70.6
Sopen07g033400 Solanum pennellii HOM05D005997 ORTHO05D008323 5.9e-102 374.8 270 68.5
GSVIVG01037764001 Vitis vinifera HOM05D005997 ORTHO05D008323 5.9e-102 374.8 252 75.0
Manes.03G134100 Manihot esculenta HOM05D005997 ORTHO05D008323 1.0e-101 374.0 240 74.2
Nn1g03269 Nelumbo nucifera HOM05D005997 ORTHO05D008323 1.0e-101 374.0 265 68.3
CiPaw.12G135200 Carya illinoinensis HOM05D005997 ORTHO05D008323 1.3e-101 373.6 216 80.6
TWI38G0893 Tripterygium wilfordii HOM05D005997 ORTHO05D008323 1.3e-101 373.6 245 73.9
PSO210G1255 Papaver somniferum HOM05D005997 ORTHO05D008323 1.7e-101 373.2 251 71.3
FvH4_3g23860 Fragaria vesca HOM05D005997 ORTHO05D008323 2.5e-100 369.4 229 76.9
MD11G1206400 Malus domestica HOM05D005997 ORTHO05D008323 2.5e-100 369.4 228 77.6
Prupe.4G230500 Prunus persica HOM05D005997 ORTHO05D008323 3.2e-100 369.0 239 74.9
Cc05_g14560 Coffea canephora HOM05D005997 ORTHO05D008323 4.7e-99 365.2 241 71.8
Lj6g0009736 Lotus japonicus HOM05D005997 ORTHO05D008323 1.4e-98 363.6 255 69.8
VMungo0540G2314 Vigna mungo HOM05D005997 ORTHO05D008323 1.4e-98 363.6 232 73.3
FAN25G0611 Fragaria x ananassa HOM05D005997 ORTHO05D008323 1.8e-98 363.2 273 67.8
Ca_20145_v3 Cicer arietinum L. HOM05D005997 ORTHO05D008323 2.6e-97 359.4 229 73.4
Migut.M01687 Erythranthe guttata HOM05D005997 ORTHO05D008323 2.6e-97 359.4 242 71.9
Sc07g0002940 Simmondsia chinensis HOM05D005997 ORTHO05D008323 2.6e-97 359.4 223 74.9
Phvul.006G051400 Phaseolus vulgaris HOM05D005997 ORTHO05D008323 3.3e-97 359.0 259 67.2
Os03g0587100 Oryza sativa ssp. japonica HOM05D005997 ORTHO05D008323 4.4e-97 358.6 227 73.1
TPR.G1907 Trifolium pratense HOM05D005997 ORTHO05D008323 7.4e-97 357.8 268 65.7
Glyma.08G325100 Glycine max HOM05D005997 ORTHO05D008323 1.3e-96 357.1 232 72.4
MSTRG.6975 Avicennia marina HOM05D005997 ORTHO05D008323 3.7e-96 355.5 258 67.8
Ca_20142_v3 Cicer arietinum L. HOM05D005997 ORTHO05D008323 3.7e-96 355.5 229 72.9
arahy.Tifrunner.gnm1.ann1.JACZ02 Arachis hypogaea HOM05D005997 ORTHO05D008323 1.8e-95 353.2 302 58.9
arahy.Tifrunner.gnm1.ann1.N1CS9Q Arachis hypogaea HOM05D005997 ORTHO05D008323 2.4e-95 352.8 301 59.5
CsaV3_7G018710 Cucumis sativus L. HOM05D005997 ORTHO05D008323 3.1e-95 352.4 228 71.5
SGA_v2.0_scaffold168G38522 Striga asiatica HOM05D005997 ORTHO05D008323 3.1e-95 352.4 221 74.2
Zm00001eb049320 Zea mays HOM05D005997 ORTHO05D008323 4.1e-95 352.1 228 71.5
Medtr3g055920 Medicago truncatula HOM05D005997 ORTHO05D008323 5.3e-95 351.7 280 64.6
SalBow8G0955 Salvia bowleyana HOM05D005997 ORTHO05D008323 5.3e-95 351.7 254 66.1
Lalb_Chr06g0174051 Lupinus albus HOM05D005997 ORTHO05D008323 7.0e-95 351.3 221 73.3
Psat5g172000 Pisum sativum HOM05D005997 ORTHO05D008323 1.2e-94 350.5 269 64.7
Sed0012266 Sechium edule HOM05D005997 ORTHO05D008323 2.0e-94 349.7 228 71.5
THA.LOC104826490 Tarenaya hassleriana HOM05D005997 ORTHO05D008323 4.5e-94 348.6 234 69.7
PGR044G2356 Punica granatum HOM05D005997 ORTHO05D008323 7.7e-94 347.8 216 75.9
ClCG09G021010 Citrullus lanatus HOM05D005997 ORTHO05D008323 2.2e-93 346.3 222 71.6
Rhsim06G0225700 Rhododendron simsii HOM05D005997 ORTHO05D008323 3.8e-93 345.5 256 68.0
DCAR_022603 Daucus carota HOM05D005997 ORTHO05D008323 8.5e-93 344.4 227 70.9
MBI16_g42314_MAGBIO Magnolia biondii HOM05D005997 ORTHO05D008323 3.2e-92 342.4 266 66.5
ATR0712G169 Amborella trichopoda HOM05D005997 ORTHO05D008323 4.2e-92 342.0 227 68.7
Thhalv10011693m.g Eutrema salsugineum HOM05D005997 ORTHO05D008323 4.2e-92 342.0 222 70.7
ECA236G3940 Erigeron canadensis HOM05D004336 ORTHO05D005367 1.2e-91 340.5 221 72.4
Oeu019619.1 Olea europaea HOM05D005997 ORTHO05D008323 3.6e-91 339.0 225 70.7
Carub.0001s3961 Capsella rubella HOM05D005997 ORTHO05D008323 6.1e-91 338.2 221 70.1
AT1G50575 Arabidopsis thaliana HOM05D005997 ORTHO05D008323 1.0e-90 337.4 222 69.4
Aa31LG10G3760 Aethionema arabicum HOM05D005997 ORTHO05D008323 1.4e-90 337.0 221 70.1
AL1G58220 Arabidopsis lyrata HOM05D005997 ORTHO05D008323 1.4e-90 337.0 231 68.4
Sp1g37390 Schrenkiella parvula HOM05D005997 ORTHO05D008323 3.0e-90 335.9 242 65.7
A06p03040 Brassica napus HOM05D005997 ORTHO05D008323 6.8e-90 334.7 233 67.0
Lj1C884G3 Lonicera japonica HOM05D005997 ORTHO05D008323 6.8e-90 334.7 248 66.9
BraA06t23516Z Brassica rapa HOM05D005997 ORTHO05D008323 8.8e-90 334.3 233 67.4
SEGI_04256 Sequoiadendron giganteum HOM05D005997 ORTHO05D008323 1.2e-89 334.0 229 68.1
BcaB07g33491 Brassica carinata HOM05D005997 ORTHO05D008323 4.4e-89 332.0 222 69.4
CARHR040570 Cardamine hirsuta HOM05D005997 ORTHO05D008323 7.5e-89 331.3 222 68.5
BcaC08g43226 Brassica carinata HOM05D005997 ORTHO05D008323 2.2e-88 329.7 233 66.1
C06p05740 Brassica napus HOM05D005997 ORTHO05D008323 2.2e-88 329.7 233 66.1
BolC6t35684H Brassica oleracea HOM05D005997 ORTHO05D008323 2.2e-88 329.7 233 66.1
EL10Ac4g07628 Beta vulgaris HOM05D005997 ORTHO05D008323 4.8e-88 328.6 281 59.1
AagrBONN_evm.TU.Sc2ySwM_362.871 Anthoceros agrestis HOM05D005997 ORTHO05D008323 3.2e-84 315.8 221 67.0
unitig_899.g15278 Utricularia gibba HOM05D005997 ORTHO05D008323 4.2e-84 315.5 191 74.3
Lsat_1_v5_gn_7_114661 Lactuca sativa HOM05D005997 ORTHO05D008323 1.2e-83 313.9 223 67.7
Haze_09774 Corylus avellana HOM05D005997 ORTHO05D008323 8.0e-83 311.2 292 59.2
Peaxi162Scf00047g00845 Petunia axillaris HOM05D005997 ORTHO05D008323 8.0e-83 311.2 270 60.0
SMO196G0283 Selaginella moellendorffii HOM05D005997 ORTHO05D008323 1.3e-80 303.9 216 65.3
Cpa.g.sc12.206 Carica papaya HOM05D005997 ORTHO05D008323 2.2e-80 303.1 179 79.3
QL08p008622 Quercus lobata HOM05D005997 ORTHO05D008323 3.7e-80 302.4 179 79.9
Atru.BG.132.p Acer truncatum HOM05D005997 ORTHO05D008323 8.3e-80 301.2 174 81.0
PGR031G3624 Punica granatum HOM05D005997 ORTHO05D008323 3.5e-78 295.8 186 74.7
vmacro11568 Vaccinium macrocarpon HOM05D005997 ORTHO05D008323 1.7e-77 293.5 178 77.5
Psat5g171680 Pisum sativum HOM05D005997 ORTHO05D008323 6.6e-77 291.6 188 72.9
PSO302G0218 Papaver somniferum HOM05D005997 ORTHO05D008323 8.6e-77 291.2 176 77.8
MELO3C024895.2 Cucumis melo HOM05D005997 ORTHO05D008323 3.3e-76 289.3 178 75.8
Pp3c14_23810 Physcomitrium patens HOM05D005997 ORTHO05D008323 3.0e-74 282.7 236 56.4
AUR62015935 Chenopodium quinoa HOM05D005997 ORTHO05D008323 2.6e-73 279.6 229 61.6
CDE07G1873 Ceratophyllum demersum HOM05D005997 ORTHO05D008323 1.7e-72 276.9 192 70.8
AUR62040674 Chenopodium quinoa HOM05D005997 ORTHO05D008323 3.7e-72 275.8 199 66.8
Glyma.18G084600 Glycine max HOM05D005997 ORTHO05D008323 3.0e-61 239.6 162 72.2
MCO11G065 Micromonas commoda HOM05D004293 ORTHO05D005044 1.9e-52 210.3 221 48.4
MCO09G728 Micromonas commoda HOM05D004293 ORTHO05D005044 9.5e-52 208.0 221 46.6
CSS0016170 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 1.2e-49 201.1 120 80.0
Cre01.g039850 Chlamydomonas reinhardtii HOM05D005997 ORTHO05D005044 2.6e-49 199.9 225 43.6
CSS0047434 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 3.4e-49 199.5 120 79.2
Dinv10299 Davidia involucrata HOM05D005997 ORTHO05D008323 2.2e-48 196.8 136 70.6
arahy.Tifrunner.gnm1.ann1.D6FGWZ Arachis hypogaea HOM05D005997 ORTHO05D008323 2.1e-46 190.3 150 61.3
Aqoxy1G04027 Aquilegia oxysepala HOM05D005997 ORTHO05D008323 1.7e-45 187.2 106 84.9
PRCOL_00002636 Prasinoderma coloniale HOM05D005997 ORTHO05D008323 1.1e-44 184.5 224 44.2
PRCOL_00000116 Prasinoderma coloniale HOM05D005997 ORTHO05D008323 1.9e-44 183.7 222 43.2
HPP92_007350 Vanilla planifolia HOM05D005997 ORTHO05D008323 4.3e-44 182.6 139 61.9
Cfa020073 Carpinus fangiana HOM05D005997 ORTHO05D008323 2.4e-42 176.8 108 78.7
CSS0025804 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 3.5e-38 162.9 161 54.7
Atru.chr7.2230 Acer truncatum HOM05D005997 ORTHO05D008323 1.0e-37 161.4 97 78.4
Atru.chr7.2351 Acer truncatum HOM05D005997 ORTHO05D008323 1.0e-37 161.4 97 78.4
Prupe.4G230300 Prunus persica HOM05D005997 ORTHO05D008323 7.1e-31 138.7 105 67.6
QL08p004262 Quercus lobata HOM05D005997 ORTHO05D008323 7.9e-30 135.2 135 57.0
QL08p058329 Quercus lobata HOM05D005997 ORTHO05D008323 7.9e-30 135.2 135 57.0
QL05p025044 Quercus lobata HOM05D005997 ORTHO05D008323 3.4e-25 119.8 156 46.2
CSS0048391 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 7.9e-22 108.6 79 64.6
SEGI_34153 Sequoiadendron giganteum HOM05D005997 ORTHO05D008323 1.1e-20 104.8 94 55.3
QL08p004281 Quercus lobata HOM05D005997 ORTHO05D007626 1.0e-16 91.7 175 36.0
CSS0044071 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 1.7e-16 90.9 56 73.2
QL08p058354 Quercus lobata HOM05D005997 ORTHO05D007626 1.6e-14 84.3 131 40.5
QL08p004325 Quercus lobata HOM05D005997 ORTHO05D337094 7.9e-14 82.0 114 45.6
CSS0025137 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 1.0e-13 81.6 48 75.0
QL11p054366 Quercus lobata HOM05D005997 ORTHO05D338109 2.3e-13 80.5 105 45.7
Rhsim03G0100400 Rhododendron simsii HOM05D005997 ORTHO05D338268 7.4e-12 75.5 98 43.9
Lsat_1_v5_gn_8_39280 Lactuca sativa HOM05D005997 ORTHO05D230963 3.2e-07 60.1 48 54.2
arahy.Tifrunner.gnm1.ann1.U3B0HF Arachis hypogaea HOM05D003842 ORTHO05D026908 4.6e-06 56.2 36 72.2
QL08p004656 Quercus lobata HOM05D005997 ORTHO05D337365 7.9e-06 55.5 35 71.4


User provided reference genes

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