Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G03825 Aquilegia oxysepala HOM05D006759 ORTHO05D008633 5.6e-46 187.2 90 100.0
QL05p077196 Quercus lobata HOM05D006759 ORTHO05D008633 3.4e-35 151.4 88 78.4
QL93p0073_1304 Quercus lobata HOM05D006759 ORTHO05D008633 3.4e-35 151.4 88 78.4
Ciclev10016144m.g Citrus clementina HOM05D006759 ORTHO05D008633 1.3e-34 149.4 88 77.3
PGR004G2806 Punica granatum HOM05D006759 ORTHO05D008633 1.3e-34 149.4 88 77.3
SGA_v2.0_scaffold7G03895 Striga asiatica HOM05D006759 ORTHO05D008633 1.7e-34 149.1 88 77.3
MD10G1311200 Malus domestica HOM05D006759 ORTHO05D008633 2.2e-34 148.7 88 78.4
CiPaw.09G080000 Carya illinoinensis HOM05D006759 ORTHO05D008633 2.9e-34 148.3 88 77.3
vmacro15843 Vaccinium macrocarpon HOM05D006759 ORTHO05D008633 2.9e-34 148.3 88 77.3
Duzib160G0398 Durio zibethinus HOM05D006759 ORTHO05D008633 4.9e-34 147.5 88 77.3
GSVIVG01004352001 Vitis vinifera HOM05D006759 ORTHO05D008633 6.4e-34 147.1 88 76.1
Cfa016405 Carpinus fangiana HOM05D006759 ORTHO05D008633 8.3e-34 146.7 87 77.0
PSO170G0831 Papaver somniferum HOM05D006759 ORTHO05D008633 8.3e-34 146.7 88 80.7
COL.COLO4_31683 Corchorus olitorius HOM05D006759 ORTHO05D008633 1.1e-33 146.4 88 75.0
Thecc.06G208000 Theobroma cacao HOM05D006759 ORTHO05D008633 1.4e-33 146.0 88 77.3
ClCG03G005150 Citrullus lanatus HOM05D006759 ORTHO05D008633 1.9e-33 145.6 87 77.0
MSTRG.15955 Avicennia marina HOM05D006759 ORTHO05D008633 2.4e-33 145.2 88 77.3
CSS0000245 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 2.4e-33 145.2 88 76.1
CSS0002106 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 2.4e-33 145.2 88 76.1
FAN21G1217 Fragaria x ananassa HOM05D006759 ORTHO05D008633 2.4e-33 145.2 88 75.0
FAN21G3610 Fragaria x ananassa HOM05D006759 ORTHO05D008633 2.4e-33 145.2 88 75.0
Haze_06682 Corylus avellana HOM05D006759 ORTHO05D008633 3.2e-33 144.8 87 77.0
FvH4_3g02960 Fragaria vesca HOM05D006759 ORTHO05D008633 3.2e-33 144.8 88 75.0
Gorai.011G019000 Gossypium raimondii HOM05D006759 ORTHO05D008633 3.2e-33 144.8 88 75.0
RcHm_v2.0_Chr5g0004601 Rosa chinensis HOM05D006759 ORTHO05D008633 4.1e-33 144.4 88 75.0
FAN25G0528 Fragaria x ananassa HOM05D006759 ORTHO05D008633 5.4e-33 144.1 88 75.0
GSVIVG01002901001 Vitis vinifera HOM05D006759 ORTHO05D008633 5.4e-33 144.1 88 75.0
Migut.M01261 Erythranthe guttata HOM05D006759 ORTHO05D008633 1.2e-32 142.9 88 73.9
Gohir.D10G017100 Gossypium hirsutum HOM05D006759 ORTHO05D008633 1.2e-32 142.9 88 73.9
Rhsim02G0115500 Rhododendron simsii HOM05D006759 ORTHO05D008633 1.2e-32 142.9 88 76.1
CAN.G424.100 Capsicum annuum HOM05D006759 ORTHO05D008633 1.6e-32 142.5 88 75.0
MELO3C002513.2 Cucumis melo HOM05D006759 ORTHO05D008633 1.6e-32 142.5 87 74.7
TWI38G2336 Tripterygium wilfordii HOM05D006759 ORTHO05D008633 1.6e-32 142.5 88 72.7
Gohir.A10G017000 Gossypium hirsutum HOM05D006759 ORTHO05D008633 2.1e-32 142.1 88 73.9
CANSAT56G4156 Cannabis sativa HOM05D006759 ORTHO05D008633 2.7e-32 141.7 88 71.6
THA.LOC104812582 Tarenaya hassleriana HOM05D006759 ORTHO05D008633 2.7e-32 141.7 88 73.9
CsaV3_1G011360 Cucumis sativus L. HOM05D006759 ORTHO05D008633 3.5e-32 141.4 87 74.7
Carub.0007s2012 Capsella rubella HOM05D006759 ORTHO05D008633 4.6e-32 141.0 87 73.6
Nitab4.5_0002345g0080 Nicotiana tabacum HOM05D006759 ORTHO05D008633 4.6e-32 141.0 88 71.6
Nitab4.5_0006475g0040 Nicotiana tabacum HOM05D006759 ORTHO05D008633 4.6e-32 141.0 88 72.7
Lalb_Chr05g0218011 Lupinus albus HOM05D006759 ORTHO05D008633 6.0e-32 140.6 88 70.5
TAR626G1069 Trochodendron aralioides HOM05D006759 ORTHO05D008633 6.0e-32 140.6 88 77.3
AT4G21320 Arabidopsis thaliana HOM05D006759 ORTHO05D008633 7.8e-32 140.2 87 73.6
Thhalv10025914m.g Eutrema salsugineum HOM05D006759 ORTHO05D008633 7.8e-32 140.2 87 72.4
Nn1g03732 Nelumbo nucifera HOM05D006759 ORTHO05D008633 7.8e-32 140.2 75 85.3
A03p52720 Brassica napus HOM05D006759 ORTHO05D008633 1.0e-31 139.8 87 72.4
BcaC06g30660 Brassica carinata HOM05D006759 ORTHO05D008633 1.3e-31 139.4 87 72.4
CARHR227890 Cardamine hirsuta HOM05D006759 ORTHO05D008633 1.3e-31 139.4 87 72.4
Sp7g19390 Schrenkiella parvula HOM05D006759 ORTHO05D008633 1.3e-31 139.4 87 71.3
Aa31LG6G3340 Aethionema arabicum HOM05D006759 ORTHO05D008633 1.7e-31 139.0 87 72.4
AL7G32800 Arabidopsis lyrata HOM05D006759 ORTHO05D008633 1.7e-31 139.0 87 72.4
Atru.chr10.2043 Acer truncatum HOM05D006759 ORTHO05D008633 2.3e-31 138.7 88 73.9
BolC7t45615H Brassica oleracea HOM05D006759 ORTHO05D008633 3.0e-31 138.3 87 71.3
Lj4g0006967 Lotus japonicus HOM05D006759 ORTHO05D008633 3.0e-31 138.3 88 69.3
Solyc02g079930.3 Solanum lycopersicum HOM05D006759 ORTHO05D008633 3.0e-31 138.3 88 73.9
Sopen02g024680 Solanum pennellii HOM05D006759 ORTHO05D008633 3.0e-31 138.3 88 73.9
PGSC0003DMG400021726 Solanum tuberosum HOM05D006759 ORTHO05D008633 3.0e-31 138.3 88 73.9
Peaxi162Scf00082g01114 Petunia axillaris HOM05D006759 ORTHO05D008633 3.9e-31 137.9 87 72.4
HPP92_027153 Vanilla planifolia HOM05D006759 ORTHO05D008633 3.9e-31 137.9 88 70.5
Cc02_g11810 Coffea canephora HOM05D006759 ORTHO05D008633 5.1e-31 137.5 94 70.2
ECA236G1815 Erigeron canadensis HOM05D006759 ORTHO05D008633 5.1e-31 137.5 87 70.1
Lj1C1222T1 Lonicera japonica HOM05D006759 ORTHO05D008633 6.6e-31 137.1 74 85.1
SalBow8G2756 Salvia bowleyana HOM05D006759 ORTHO05D008633 6.6e-31 137.1 87 72.4
Sabra11G0019100 Salix brachista HOM05D006759 ORTHO05D008633 1.1e-30 136.3 89 71.9
Sabra11G0024900 Salix brachista HOM05D006759 ORTHO05D008633 1.1e-30 136.3 89 71.9
Sed0013464 Sechium edule HOM05D006759 ORTHO05D008633 1.1e-30 136.3 87 73.6
HanXRQChr05g0130811 Helianthus annuus HOM05D006759 ORTHO05D008633 1.5e-30 136.0 88 71.6
Lsat_1_v5_gn_7_18360 Lactuca sativa HOM05D006759 ORTHO05D008633 1.5e-30 136.0 88 68.2
Eucgr.D00856 Eucalyptus grandis HOM05D006759 ORTHO05D008633 1.9e-30 135.6 88 71.6
Psat7g105480 Pisum sativum HOM05D006759 ORTHO05D008633 1.9e-30 135.6 88 69.3
Dinv17853 Davidia involucrata HOM05D006759 ORTHO05D008633 2.5e-30 135.2 75 81.3
Potri.011G031600 Populus trichocarpa HOM05D006759 ORTHO05D008633 3.3e-30 134.8 89 70.8
arahy.Tifrunner.gnm1.ann1.13LU1X Arachis hypogaea HOM05D006759 ORTHO05D008633 4.3e-30 134.4 88 67.0
arahy.Tifrunner.gnm1.ann1.6345FV Arachis hypogaea HOM05D006759 ORTHO05D008633 4.3e-30 134.4 88 67.0
Cpa.g.sc81.5 Carica papaya HOM05D006759 ORTHO05D008633 5.6e-30 134.0 88 72.7
Medtr4g092110 Medicago truncatula HOM05D006759 ORTHO05D008633 5.6e-30 134.0 88 67.0
CDE05G1382 Ceratophyllum demersum HOM05D006759 ORTHO05D008633 9.5e-30 133.3 88 68.2
Sc05g0008410 Simmondsia chinensis HOM05D006759 ORTHO05D008633 2.1e-29 132.1 86 69.8
MBI02_g02472_MAGBIO Magnolia biondii HOM05D006759 ORTHO05D008633 2.8e-29 131.7 131 53.4
Oeu058167.4 Olea europaea HOM05D006759 ORTHO05D008633 3.6e-29 131.3 112 58.9
Prupe.4G029700 Prunus persica HOM05D006759 ORTHO05D008633 8.1e-29 130.2 74 79.7
AUR62014623 Chenopodium quinoa HOM05D006759 ORTHO05D008633 1.4e-28 129.4 88 67.0
Os06g0682900 Oryza sativa ssp. japonica HOM05D006759 ORTHO05D008633 1.8e-28 129.0 74 82.4
Zm00001eb225360 Zea mays HOM05D006759 ORTHO05D008633 2.3e-28 128.6 89 70.8
Ca_18449_v3 Cicer arietinum L. HOM05D006759 ORTHO05D008633 4.0e-28 127.9 88 64.8
Glyma.08G062300 Glycine max HOM05D006759 ORTHO05D008633 4.0e-28 127.9 88 65.9
DCAR_028150 Daucus carota HOM05D006759 ORTHO05D008633 1.2e-27 126.3 74 74.3
EL10As6g23697 Beta vulgaris HOM05D006759 ORTHO05D008633 1.5e-27 125.9 88 64.8
TPR.G13912 Trifolium pratense HOM05D006759 ORTHO05D008633 2.0e-27 125.6 87 62.1
ATR0073G021 Amborella trichopoda HOM05D006759 ORTHO05D008633 2.6e-27 125.2 70 81.4
AUR62012578 Chenopodium quinoa HOM05D006759 ORTHO05D008633 2.6e-27 125.2 88 65.9
BraA03t14346Z Brassica rapa HOM05D006759 ORTHO05D008633 5.8e-27 124.0 73 74.0
unitig_37.g12139 Utricularia gibba HOM05D006759 ORTHO05D008633 9.9e-27 123.2 86 67.4
BcaNung00862 Brassica carinata HOM05D006759 ORTHO05D008633 1.7e-26 122.5 73 72.6
C07p51160 Brassica napus HOM05D006759 ORTHO05D008633 1.7e-26 122.5 73 72.6
Manes.16G016600 Manihot esculenta HOM05D006759 ORTHO05D008633 1.7e-26 122.5 90 66.7
Phvul.002G218300 Phaseolus vulgaris HOM05D006759 ORTHO05D008633 4.1e-25 117.9 85 63.5
GSVIVG01004471001 Vitis vinifera HOM05D006759 ORTHO05D008633 4.1e-25 117.9 75 70.7
Ah.14g088500 Amaranthus hybridus HOM05D006759 ORTHO05D008633 2.7e-24 115.2 76 68.4
VMungo0251G0437 Vigna mungo HOM05D006759 ORTHO05D008633 3.9e-23 111.3 87 60.9
SEGI_30514 Sequoiadendron giganteum HOM05D006759 ORTHO05D008633 1.5e-22 109.4 84 61.9
Hund21315 Selenicereus undatus HOM05D006759 ORTHO05D008633 3.1e-20 101.7 65 66.2
AagrBONN_evm.TU.Sc2ySwM_117.529 Anthoceros agrestis HOM05D006759 ORTHO05D008633 1.2e-19 99.8 70 60.0
Hund21313 Selenicereus undatus HOM05D006759 ORTHO05D008633 2.2e-18 95.5 88 58.0
Mapoly0122s0010 Marchantia polymorpha HOM05D006759 ORTHO05D008633 2.4e-17 92.0 75 54.7
Pp3c18_19780 Physcomitrium patens HOM05D006759 ORTHO05D008633 3.0e-15 85.1 75 53.3
Pp3c22_820 Physcomitrium patens HOM05D006759 ORTHO05D008633 3.0e-15 85.1 70 55.7
SMO327G0040 Selaginella moellendorffii HOM05D006759 ORTHO05D008633 1.2e-13 79.7 57 57.9


User provided reference genes

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