Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G03766 Aquilegia oxysepala HOM05D005688 ORTHO05D006630 3.5e-83 311.6 159 100.0
Aqoxy3G01629 Aquilegia oxysepala HOM05D005688 ORTHO05D006630 8.8e-71 270.4 141 96.5
TAR629G3099 Trochodendron aralioides HOM05D005688 ORTHO05D006630 1.2e-40 170.2 148 66.2
TAR371G0171 Trochodendron aralioides HOM05D005688 ORTHO05D006630 9.8e-38 160.6 147 62.6
HanXRQChr17g0568911 Helianthus annuus HOM05D005688 ORTHO05D006630 7.1e-36 154.5 142 57.7
Lsat_1_v5_gn_4_280 Lactuca sativa HOM05D005688 ORTHO05D006630 4.6e-35 151.8 160 54.4
ECA234G1377 Erigeron canadensis HOM05D005688 ORTHO05D006630 1.7e-34 149.8 136 56.6
Nn3g16394 Nelumbo nucifera HOM05D005688 ORTHO05D006630 1.7e-34 149.8 147 58.5
Dinv11693 Davidia involucrata HOM05D005688 ORTHO05D006630 8.6e-34 147.5 137 59.9
THA.LOC104810209 Tarenaya hassleriana HOM05D005688 ORTHO05D006630 1.9e-33 146.4 143 52.4
Hma1.2p1_0065F.1_g035040 Hydrangea macrophylla HOM05D005688 ORTHO05D006630 2.5e-33 146.0 139 56.8
PSO017G1106 Papaver somniferum HOM05D005688 ORTHO05D006630 3.3e-33 145.6 165 53.3
PSO478G0501 Papaver somniferum HOM05D005688 ORTHO05D006630 5.6e-33 144.8 168 52.4
Duzib251G0174 Durio zibethinus HOM05D005688 ORTHO05D006630 9.5e-33 144.1 138 58.0
Manes.12G008200 Manihot esculenta HOM05D005688 ORTHO05D006630 1.6e-32 143.3 156 53.8
Manes.13G008600 Manihot esculenta HOM05D005688 ORTHO05D006630 4.7e-32 141.7 153 56.2
Ciclev10032000m.g Citrus clementina HOM05D005688 ORTHO05D006630 6.2e-32 141.4 139 56.1
BolC9t59237H Brassica oleracea HOM05D005688 ORTHO05D006630 8.1e-32 141.0 155 47.7
Dinv17591 Davidia involucrata HOM05D005688 ORTHO05D006630 1.1e-31 140.6 151 56.3
Glyma.18G284500 Glycine max HOM05D005688 ORTHO05D006630 1.1e-31 140.6 162 51.2
Phvul.008G017000 Phaseolus vulgaris HOM05D005688 ORTHO05D006630 1.1e-31 140.6 161 52.2
C09p63990 Brassica napus HOM05D000918 ORTHO05D006630 2.3e-31 139.4 157 47.8
Thhalv10013944m.g Eutrema salsugineum HOM05D005688 ORTHO05D006630 2.3e-31 139.4 150 47.3
Potri.001G059700 Populus trichocarpa HOM05D005688 ORTHO05D006630 2.3e-31 139.4 136 52.9
Thecc.02G201300 Theobroma cacao HOM05D005688 ORTHO05D006630 2.3e-31 139.4 140 57.1
Actinidia09624 Actinidia chinensis HOM05D005688 ORTHO05D006630 3.1e-31 139.0 132 59.1
A10p25100 Brassica napus HOM05D000918 ORTHO05D006630 4.0e-31 138.7 147 48.3
Haze_12451 Corylus avellana HOM05D005688 ORTHO05D006630 4.0e-31 138.7 153 53.6
Lj6A830T28 Lonicera japonica HOM05D005688 ORTHO05D006630 4.0e-31 138.7 137 54.7
Potri.003G168300 Populus trichocarpa HOM05D005688 ORTHO05D006630 4.0e-31 138.7 136 54.4
Glyma.02G097000 Glycine max HOM05D005688 ORTHO05D006630 5.2e-31 138.3 163 50.3
DCAR_024659 Daucus carota HOM05D005688 ORTHO05D006630 6.8e-31 137.9 142 54.9
Carub.0006s1127 Capsella rubella HOM05D005688 ORTHO05D006630 1.2e-30 137.1 153 47.1
Sc04g0010310 Simmondsia chinensis HOM05D005688 ORTHO05D006630 1.5e-30 136.7 131 55.0
CARHR200370 Cardamine hirsuta HOM05D005688 ORTHO05D006630 2.0e-30 136.3 145 48.3
Cfa009390 Carpinus fangiana HOM05D005688 ORTHO05D006630 3.4e-30 135.6 153 49.0
BcaB01g05377 Brassica carinata HOM05D005688 ORTHO05D006630 5.8e-30 134.8 161 46.6
BraA03t09920Z Brassica rapa HOM05D000918 ORTHO05D006630 5.8e-30 134.8 161 46.6
MELO3C017746.2 Cucumis melo HOM05D005688 ORTHO05D006630 5.8e-30 134.8 150 50.7
Sp6g30880 Schrenkiella parvula HOM05D005688 ORTHO05D006630 5.8e-30 134.8 147 49.0
C03p06760 Brassica napus HOM05D000918 ORTHO05D006630 7.6e-30 134.4 161 46.6
BolC3t13183H Brassica oleracea HOM05D000918 ORTHO05D006630 7.6e-30 134.4 161 46.6
CDE05G3530 Ceratophyllum demersum HOM05D005688 ORTHO05D006630 7.6e-30 134.4 153 50.3
Rhsim12G0023600 Rhododendron simsii HOM05D005688 ORTHO05D006630 7.6e-30 134.4 155 50.3
Sed0011472 Sechium edule HOM05D005688 ORTHO05D006630 7.6e-30 134.4 144 51.4
A03p05810 Brassica napus HOM05D000918 ORTHO05D000791 9.9e-30 134.0 161 46.6
BraA10t44572Z Brassica rapa HOM05D005688 ORTHO05D006630 9.9e-30 134.0 148 48.0
Aa31LG3G14570 Aethionema arabicum HOM05D005688 ORTHO05D006630 1.3e-29 133.7 143 48.3
AT5G13100 Arabidopsis thaliana HOM05D005688 ORTHO05D006630 1.3e-29 133.7 145 49.0
CANSAT80G0816 Cannabis sativa HOM05D005688 ORTHO05D006630 1.3e-29 133.7 151 50.3
Sabra03G0123400 Salix brachista HOM05D005688 ORTHO05D006630 1.3e-29 133.7 136 52.9
AL6G23700 Arabidopsis lyrata HOM05D005688 ORTHO05D006630 1.7e-29 133.3 145 47.6
CiPaw.06G105500 Carya illinoinensis HOM05D005688 ORTHO05D006630 1.7e-29 133.3 140 53.6
CsaV3_4G002970 Cucumis sativus L. HOM05D005688 ORTHO05D006630 1.7e-29 133.3 152 49.3
Gohir.D04G139300 Gossypium hirsutum HOM05D005688 ORTHO05D006630 1.7e-29 133.3 138 53.6
Gorai.012G124400 Gossypium raimondii HOM05D005688 ORTHO05D006630 1.7e-29 133.3 138 53.6
Medtr7g022390 Medicago truncatula HOM05D005688 ORTHO05D006630 1.7e-29 133.3 151 51.7
COL.COLO4_27347 Corchorus olitorius HOM05D005688 ORTHO05D006630 2.2e-29 132.9 133 54.9
Lalb_Chr10g0092021 Lupinus albus HOM05D005688 ORTHO05D006630 2.9e-29 132.5 163 49.1
Psat3g187080 Pisum sativum HOM05D005688 ORTHO05D006630 2.9e-29 132.5 144 51.4
CDE05G2516 Ceratophyllum demersum HOM05D005688 ORTHO05D006630 3.7e-29 132.1 130 55.4
Sabra01G0042800 Salix brachista HOM05D005688 ORTHO05D006630 3.7e-29 132.1 135 52.6
CSS0036763 Camellia sinensis var. sinensis HOM05D005688 ORTHO05D006630 4.9e-29 131.7 134 57.5
CSS0038243 Camellia sinensis var. sinensis HOM05D005688 ORTHO05D006630 4.9e-29 131.7 141 54.6
Cpa.g.sc99.53 Carica papaya HOM05D005688 ORTHO05D006630 4.9e-29 131.7 136 54.4
CiPaw.05G106800 Carya illinoinensis HOM05D005688 ORTHO05D006630 4.9e-29 131.7 157 49.7
Gohir.A04G100300 Gossypium hirsutum HOM05D005688 ORTHO05D006630 4.9e-29 131.7 138 52.9
Prupe.1G222300 Prunus persica HOM05D005688 ORTHO05D006630 1.1e-28 130.6 163 49.1
Atru.chr11.2370 Acer truncatum HOM05D005688 ORTHO05D006630 1.4e-28 130.2 155 50.3
ClCG07G015390 Citrullus lanatus HOM05D005688 ORTHO05D006630 1.4e-28 130.2 147 50.3
Ca_07133_v3 Cicer arietinum L. HOM05D005688 ORTHO05D006630 1.9e-28 129.8 164 49.4
Ca_28122_v3 Cicer arietinum L. HOM05D005688 ORTHO05D006630 1.9e-28 129.8 164 49.4
FvH4_4g23370 Fragaria vesca HOM05D005688 ORTHO05D006630 2.4e-28 129.4 146 47.9
FAN12G1631 Fragaria x ananassa HOM05D005688 ORTHO05D006630 2.4e-28 129.4 146 47.9
Solyc05g015980.3 Solanum lycopersicum HOM05D005688 ORTHO05D006630 3.2e-28 129.0 154 50.6
Sopen05g011970 Solanum pennellii HOM05D005688 ORTHO05D006630 3.2e-28 129.0 154 50.6
Duzib248G1308 Durio zibethinus HOM05D005688 ORTHO05D006630 4.1e-28 128.6 138 52.9
FAN07G0693 Fragaria x ananassa HOM05D005688 ORTHO05D006630 4.1e-28 128.6 147 47.6
MSTRG.481 Avicennia marina HOM05D005688 ORTHO05D006630 5.4e-28 128.3 133 52.6
Nitab4.5_0002277g0010 Nicotiana tabacum HOM05D005688 ORTHO05D006630 7.1e-28 127.9 157 47.8
PGSC0003DMG400010801 Solanum tuberosum HOM05D005688 ORTHO05D006630 7.1e-28 127.9 154 50.0
FAN17G3098 Fragaria x ananassa HOM05D005688 ORTHO05D006630 1.2e-27 127.1 147 46.9
unitig_8.g2900 Utricularia gibba HOM05D005688 ORTHO05D006630 1.2e-27 127.1 135 51.9
RcHm_v2.0_Chr4g0429761 Rosa chinensis HOM05D005688 ORTHO05D006630 1.6e-27 126.7 146 50.0
Nitab4.5_0000251g0050 Nicotiana tabacum HOM05D005688 ORTHO05D006630 2.1e-27 126.3 159 47.2
SalBow2G0527 Salvia bowleyana HOM05D005688 ORTHO05D006630 2.7e-27 125.9 132 52.3
Sed0014060 Sechium edule HOM05D005688 ORTHO05D006630 2.7e-27 125.9 149 47.0
TWI75G1512 Tripterygium wilfordii HOM05D005688 ORTHO05D006630 2.7e-27 125.9 143 49.0
QL03p051598 Quercus lobata HOM05D005688 ORTHO05D006630 4.6e-27 125.2 164 45.7
Lalb_Chr17g0336391 Lupinus albus HOM05D005688 ORTHO05D006630 6.0e-27 124.8 155 51.0
Actinidia39795 Actinidia chinensis HOM05D005688 ORTHO05D006630 7.8e-27 124.4 116 61.2
CAN.G163.3 Capsicum annuum HOM05D005688 ORTHO05D006630 7.8e-27 124.4 160 48.8
MD16G1123300 Malus domestica HOM05D005688 ORTHO05D006630 7.8e-27 124.4 161 47.2
TWI36G1544 Tripterygium wilfordii HOM05D005688 ORTHO05D006630 1.0e-26 124.0 143 52.4
Migut.E00005 Erythranthe guttata HOM05D005688 ORTHO05D006630 2.3e-26 122.9 138 49.3
Oeu012651.1 Olea europaea HOM05D005688 ORTHO05D006630 6.6e-26 121.3 141 49.6
Actinidia08052 Actinidia chinensis HOM05D005688 ORTHO05D006630 8.6e-26 120.9 150 48.7
PGR102G0765 Punica granatum HOM05D005688 ORTHO05D006630 8.6e-26 120.9 152 48.0
ATR0582G145 Amborella trichopoda HOM05D005688 ORTHO05D006630 1.1e-25 120.6 127 52.8
vmacro01046 Vaccinium macrocarpon HOM05D005688 ORTHO05D006630 1.9e-25 119.8 160 46.9
MBI07_g18747_MAGBIO Magnolia biondii HOM05D005688 ORTHO05D006630 2.5e-25 119.4 135 55.6
Peaxi162Scf00128g01523 Petunia axillaris HOM05D005688 ORTHO05D006630 3.3e-25 119.0 161 44.7
arahy.Tifrunner.gnm1.ann1.97E8EB Arachis hypogaea HOM05D005688 ORTHO05D006630 4.3e-25 118.6 178 45.5
arahy.Tifrunner.gnm1.ann1.N9VQT0 Arachis hypogaea HOM05D005688 ORTHO05D006630 4.3e-25 118.6 178 45.5
unitig_26.g10416 Utricularia gibba HOM05D005688 ORTHO05D006630 9.6e-25 117.5 131 51.1
TPR.G2946 Trifolium pratense HOM05D005688 ORTHO05D006630 2.8e-24 115.9 130 51.5
Hund06107 Selenicereus undatus HOM05D005688 ORTHO05D006630 8.1e-24 114.4 152 43.4
Lj1g0000862 Lotus japonicus HOM05D005688 ORTHO05D006630 3.1e-23 112.5 171 43.3
HPP92_011533 Vanilla planifolia HOM05D005688 ORTHO05D006630 8.9e-23 110.9 131 45.8
HPP92_011539 Vanilla planifolia HOM05D005688 ORTHO05D006630 8.9e-23 110.9 131 45.8
AUR62028899 Chenopodium quinoa HOM05D005688 ORTHO05D006630 1.2e-22 110.5 131 48.1
EL10Ac6g13540 Beta vulgaris HOM05D005688 ORTHO05D006630 1.5e-22 110.2 137 46.7
Ah.03g135940 Amaranthus hybridus HOM05D005688 ORTHO05D006630 4.4e-22 108.6 140 44.3
Ah.02g130750 Amaranthus hybridus HOM05D005688 ORTHO05D006630 4.2e-20 102.1 144 41.7
Eucgr.B03525 Eucalyptus grandis HOM05D005688 ORTHO05D006630 4.2e-20 102.1 158 39.2
BcaC04g19152 Brassica carinata HOM05D005688 ORTHO05D006630 7.8e-19 97.8 155 38.7
SEGI_34677 Sequoiadendron giganteum HOM05D005688 ORTHO05D006630 2.3e-18 96.3 93 55.9
Zm00001eb127020 Zea mays HOM05D005688 ORTHO05D006630 1.1e-17 94.0 153 39.2
SEGI_28374 Sequoiadendron giganteum HOM05D005688 ORTHO05D006630 3.6e-16 89.0 113 46.9
VMungo1383G3355 Vigna mungo HOM05D005688 ORTHO05D006630 3.6e-16 89.0 159 39.0
Mapoly0015s0197 Marchantia polymorpha HOM05D005688 ORTHO05D006630 2.4e-15 86.3 90 52.2
Ah.02g130760 Amaranthus hybridus HOM05D005688 ORTHO05D006630 1.2e-14 84.0 113 44.2
ATR0579G080 Amborella trichopoda HOM05D005688 ORTHO05D006630 4.4e-14 82.0 147 39.5
Os01g0102500 Oryza sativa ssp. japonica HOM05D005688 ORTHO05D006630 9.9e-14 80.9 122 39.3
CBR_g40425 Chara braunii HOM05D005688 ORTHO05D006630 2.2e-13 79.7 103 44.7
AagrBONN_evm.TU.Sc2ySwM_340.298 Anthoceros agrestis HOM05D005688 ORTHO05D006630 3.8e-13 79.0 106 43.4
SMO367G0614 Selaginella moellendorffii HOM05D005688 ORTHO05D006630 3.2e-12 75.9 102 43.1
MBI04_g07882_MAGBIO Magnolia biondii HOM05D005688 ORTHO05D006630 2.7e-11 72.8 137 37.2


User provided reference genes

Program Settings