Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G03666 Aquilegia oxysepala HOM05D006334 ORTHO05D008320 2.6e-99 366.3 226 100.0
Potri.001G418900 Populus trichocarpa HOM05D006334 ORTHO05D008320 3.2e-73 279.6 228 71.1
DCAR_022532 Daucus carota HOM05D006334 ORTHO05D008320 2.0e-72 276.9 227 75.3
FvH4_3g21950 Fragaria vesca HOM05D006334 ORTHO05D008320 4.6e-72 275.8 227 77.5
CSS0039549 Camellia sinensis var. sinensis HOM05D006334 ORTHO05D008320 5.9e-72 275.4 228 72.4
GSVIVG01001978001 Vitis vinifera HOM05D006334 ORTHO05D008320 6.6e-71 271.9 227 79.3
QL08p012879 Quercus lobata HOM05D006334 ORTHO05D008320 1.5e-70 270.8 206 73.3
FAN11G3716 Fragaria x ananassa HOM05D006334 ORTHO05D008320 1.9e-70 270.4 227 77.1
Dinv22296 Davidia involucrata HOM05D006334 ORTHO05D008320 2.5e-70 270.0 183 75.4
Cfa020403 Carpinus fangiana HOM05D001306 ORTHO05D001159 3.3e-70 269.6 209 69.4
MD11G1224700 Malus domestica HOM05D006334 ORTHO05D008320 1.6e-69 267.3 226 76.5
FAN25G1013 Fragaria x ananassa HOM05D006334 ORTHO05D008320 2.1e-69 266.9 223 77.6
RcHm_v2.0_Chr5g0037801 Rosa chinensis HOM05D006334 ORTHO05D008320 2.1e-69 266.9 226 72.1
PSO210G7302 Papaver somniferum HOM05D006334 ORTHO05D008320 4.7e-69 265.8 229 79.0
Prupe.4G205200 Prunus persica HOM05D006334 ORTHO05D008320 4.7e-69 265.8 213 77.9
HanXRQChr11g0337741 Helianthus annuus HOM05D006334 ORTHO05D008320 1.8e-68 263.8 226 77.0
Lsat_1_v5_gn_7_109541 Lactuca sativa HOM05D006334 ORTHO05D008320 2.3e-68 263.5 213 75.1
Lj8A166G85 Lonicera japonica HOM05D006334 ORTHO05D008320 2.3e-68 263.5 222 79.7
MD03G1210000 Malus domestica HOM05D006334 ORTHO05D008320 2.3e-68 263.5 226 77.0
Nn1g07058 Nelumbo nucifera HOM05D006334 ORTHO05D008320 5.2e-68 262.3 183 85.2
Haze_09629 Corylus avellana HOM05D006334 ORTHO05D008320 1.5e-67 260.8 211 70.1
PSO832G3755 Papaver somniferum HOM05D006334 ORTHO05D008320 1.5e-67 260.8 229 77.3
Eucgr.F03434 Eucalyptus grandis HOM05D006334 ORTHO05D008320 2.6e-67 260.0 210 75.7
TWI38G1766 Tripterygium wilfordii HOM05D006334 ORTHO05D008320 3.4e-67 259.6 222 73.0
CiPaw.12G127100 Carya illinoinensis HOM05D006334 ORTHO05D008320 4.4e-67 259.2 207 75.8
Ciclev10009059m.g Citrus clementina HOM05D006334 ORTHO05D008320 4.4e-67 259.2 187 82.4
MBI02_g23962_MAGBIO Magnolia biondii HOM05D006334 ORTHO05D008320 4.4e-67 259.2 224 78.6
RhsimUnG0252800 Rhododendron simsii HOM05D006334 ORTHO05D008320 4.4e-67 259.2 255 69.0
Nitab4.5_0002229g0170 Nicotiana tabacum HOM05D006334 ORTHO05D008320 7.5e-67 258.5 186 82.3
Gorai.002G083500 Gossypium raimondii HOM05D006334 ORTHO05D008320 9.8e-67 258.1 187 82.4
Manes.03G123900 Manihot esculenta HOM05D006334 ORTHO05D008320 9.8e-67 258.1 187 81.8
QL08p012752 Quercus lobata HOM05D006334 ORTHO05D008320 9.8e-67 258.1 186 79.6
Sabra16G0284400 Salix brachista HOM05D006334 ORTHO05D008320 9.8e-67 258.1 226 76.1
Thecc.07G050800 Theobroma cacao HOM05D006334 ORTHO05D008320 1.3e-66 257.7 185 83.2
vmacro09744 Vaccinium macrocarpon HOM05D006334 ORTHO05D008320 2.9e-66 256.5 187 81.8
ECA236G0521 Erigeron canadensis HOM05D006334 ORTHO05D008320 8.3e-66 255.0 226 76.1
CAN.G1110.6 Capsicum annuum HOM05D006334 ORTHO05D008320 1.9e-65 253.8 186 79.0
Nitab4.5_0002342g0070 Nicotiana tabacum HOM05D006334 ORTHO05D008320 1.9e-65 253.8 187 78.6
COL.COLO4_09585 Corchorus olitorius HOM05D006334 ORTHO05D008320 2.4e-65 253.4 187 81.3
Gohir.D01G062800 Gossypium hirsutum HOM05D006334 ORTHO05D008320 7.0e-65 251.9 187 80.7
ClCG05G014700 Citrullus lanatus HOM05D006334 ORTHO05D008320 9.2e-65 251.5 220 71.8
Lj3g0002745 Lotus japonicus HOM05D006334 ORTHO05D008320 1.6e-64 250.8 207 75.4
Atru.chr2.3229 Acer truncatum HOM05D006334 ORTHO05D008320 2.7e-64 250.0 226 76.1
Solyc10g006460.3 Solanum lycopersicum HOM05D006334 ORTHO05D008320 3.5e-64 249.6 185 74.1
TAR629G3436 Trochodendron aralioides HOM05D006334 ORTHO05D008320 4.6e-64 249.2 178 83.7
Gohir.A01G075500 Gossypium hirsutum HOM05D006334 ORTHO05D008320 1.3e-63 247.7 187 79.7
AUR62020535 Chenopodium quinoa HOM05D006334 ORTHO05D008320 1.7e-63 247.3 217 67.7
Medtr2g083200 Medicago truncatula HOM05D006334 ORTHO05D008320 3.9e-63 246.1 180 82.2
Hund23297 Selenicereus undatus HOM05D006334 ORTHO05D008320 5.0e-63 245.7 212 69.8
Duzib268G1565 Durio zibethinus HOM05D006334 ORTHO05D008320 8.6e-63 245.0 187 79.7
Phvul.005G092400 Phaseolus vulgaris HOM05D006334 ORTHO05D008320 8.6e-63 245.0 219 69.9
CsaV3_3G023200 Cucumis sativus L. HOM05D006334 ORTHO05D008320 1.9e-62 243.8 187 80.2
CsaV3_UNG104770 Cucumis sativus L. HOM05D006334 ORTHO05D008320 1.9e-62 243.8 187 80.2
Migut.M01801 Erythranthe guttata HOM05D006334 ORTHO05D008320 5.6e-62 242.3 140 86.4
AUR62005409 Chenopodium quinoa HOM05D006334 ORTHO05D008320 7.3e-62 241.9 183 79.8
AUR62015668 Chenopodium quinoa HOM05D006334 ORTHO05D008320 7.3e-62 241.9 185 78.4
CDE05G3377 Ceratophyllum demersum HOM05D006334 ORTHO05D008320 1.2e-61 241.1 226 68.1
Sopen10g002410 Solanum pennellii HOM05D006334 ORTHO05D008320 1.2e-61 241.1 139 84.9
Os07g0103200 Oryza sativa ssp. japonica HOM05D006334 ORTHO05D008320 1.6e-61 240.7 211 70.6
PGSC0003DMG400014399 Solanum tuberosum HOM05D006334 ORTHO05D008320 2.1e-61 240.4 135 85.9
MELO3C018091.2 Cucumis melo HOM05D006334 ORTHO05D008320 3.6e-61 239.6 187 79.7
Sc07g0002760 Simmondsia chinensis HOM05D006334 ORTHO05D008320 4.7e-61 239.2 187 77.5
Haze_24344 Corylus avellana HOM05D003220 ORTHO05D003944 6.2e-61 238.8 142 83.8
SGA_v2.0_scaffold101G29789 Striga asiatica HOM05D006334 ORTHO05D008320 8.1e-61 238.4 142 82.4
Zm00001eb298180 Zea mays HOM05D006334 ORTHO05D008320 8.1e-61 238.4 189 69.8
PGR031G1291 Punica granatum HOM05D006334 ORTHO05D008320 1.4e-60 237.7 187 77.5
Aa31LG5G10300 Aethionema arabicum HOM05D006334 ORTHO05D008320 1.8e-60 237.3 189 79.4
Peaxi162Scf00407g00312 Petunia axillaris HOM05D006334 ORTHO05D008320 1.8e-60 237.3 143 81.8
VMungo1080G0184 Vigna mungo HOM05D006334 ORTHO05D008320 3.1e-60 236.5 185 78.4
Ah.04g165560 Amaranthus hybridus HOM05D006334 ORTHO05D008320 5.2e-60 235.7 217 66.4
AL7G25680 Arabidopsis lyrata HOM05D006334 ORTHO05D008320 1.2e-59 234.6 189 78.8
AT4G27120 Arabidopsis thaliana HOM05D006334 ORTHO05D008320 1.2e-59 234.6 189 78.8
CARHR234770 Cardamine hirsuta HOM05D006334 ORTHO05D008320 1.5e-59 234.2 189 78.8
Peaxi162Scf00450g00858 Petunia axillaris HOM05D006334 ORTHO05D008320 1.5e-59 234.2 191 72.8
Glyma.13G288200 Glycine max HOM05D006334 ORTHO05D008320 7.5e-59 231.9 185 78.4
arahy.Tifrunner.gnm1.ann1.9AY9GA Arachis hypogaea HOM05D006334 ORTHO05D008320 9.9e-59 231.5 205 71.2
arahy.Tifrunner.gnm1.ann1.Q0MPW2 Arachis hypogaea HOM05D006334 ORTHO05D008320 9.9e-59 231.5 205 71.2
Psat5g251960 Pisum sativum HOM05D006334 ORTHO05D008320 2.2e-58 230.3 217 65.9
THA.LOC104812531 Tarenaya hassleriana HOM05D006334 ORTHO05D008320 8.3e-58 228.4 185 76.8
Carub.0007s1372 Capsella rubella HOM05D006334 ORTHO05D008320 4.1e-57 226.1 188 77.1
Carub.0008s0614 Capsella rubella HOM05D006334 ORTHO05D008320 7.1e-57 225.3 183 78.7
MSTRG.27096 Avicennia marina HOM05D006334 ORTHO05D008320 9.2e-57 224.9 140 78.6
Ca_01740_v3 Cicer arietinum L. HOM05D006334 ORTHO05D008320 1.2e-56 224.6 220 69.1
Cc05_g13330 Coffea canephora HOM05D006334 ORTHO05D008320 1.2e-56 224.6 137 81.0
Lalb_Chr24g0400251 Lupinus albus HOM05D006334 ORTHO05D008320 1.6e-56 224.2 139 80.6
TPR.G19971 Trifolium pratense HOM05D006334 ORTHO05D008320 7.8e-56 221.9 138 81.2
Thhalv10025846m.g Eutrema salsugineum HOM05D006334 ORTHO05D008320 1.3e-55 221.1 183 77.0
HPP92_014117 Vanilla planifolia HOM05D006334 ORTHO05D008320 2.3e-55 220.3 206 72.8
Glyma.12G213500 Glycine max HOM05D006334 ORTHO05D008320 3.0e-55 219.9 138 80.4
Sp7g25090 Schrenkiella parvula HOM05D006334 ORTHO05D008320 1.9e-54 217.2 182 76.9
BcaNung03057 Brassica carinata HOM05D006334 ORTHO05D008320 2.5e-54 216.9 142 78.9
BraA01t01781Z Brassica rapa HOM05D006334 ORTHO05D008320 4.3e-54 216.1 142 78.9
Sed0009538 Sechium edule HOM05D006334 ORTHO05D008320 7.3e-54 215.3 130 82.3
BolC1t02259H Brassica oleracea HOM05D006334 ORTHO05D008320 1.6e-53 214.2 142 78.9
C01p23260 Brassica napus HOM05D006334 ORTHO05D008320 3.6e-53 213.0 142 78.2
A03p57090 Brassica napus HOM05D006334 ORTHO05D008320 4.7e-53 212.6 144 78.5
BraA03t14779Z Brassica rapa HOM05D006334 ORTHO05D008320 4.7e-53 212.6 144 78.5
unitig_748.g7233 Utricularia gibba HOM05D006334 ORTHO05D008320 1.8e-52 210.7 139 77.0
BolC7t46013H Brassica oleracea HOM05D006334 ORTHO05D001501 3.1e-52 209.9 134 79.9
BcaC06g32710 Brassica carinata HOM05D006334 ORTHO05D008320 6.8e-52 208.8 134 79.1
C07p54970 Brassica napus HOM05D006334 ORTHO05D008320 6.8e-52 208.8 134 79.1
SEGI_34639 Sequoiadendron giganteum HOM05D006334 ORTHO05D008320 6.8e-52 208.8 194 68.0
A01p18260 Brassica napus HOM05D006334 ORTHO05D008320 1.2e-51 208.0 126 82.5
Mapoly0114s0022 Marchantia polymorpha HOM05D006334 ORTHO05D008320 9.9e-51 204.9 196 66.3
Actinidia35324 Actinidia chinensis HOM05D006334 ORTHO05D008320 2.1e-48 197.2 106 89.6
Pp3c20_19360 Physcomitrium patens HOM05D006334 ORTHO05D008320 1.0e-47 194.9 178 66.3
EL10Ac4g07940 Beta vulgaris HOM05D006334 ORTHO05D008320 5.1e-47 192.6 217 62.2
FAN21G3458 Fragaria x ananassa HOM05D006334 ORTHO05D008320 4.3e-46 189.5 184 69.6
AagrBONN_evm.TU.Sc2ySwM_228.581 Anthoceros agrestis HOM05D006334 ORTHO05D008320 7.3e-46 188.7 196 63.3
SMO143G0307 Selaginella moellendorffii HOM05D006334 ORTHO05D008320 3.6e-45 186.4 126 73.8
AagrBONN_evm.TU.Sc2ySwM_368.826 Anthoceros agrestis HOM05D006334 ORTHO05D008320 1.8e-44 184.1 196 60.7
Actinidia10714 Actinidia chinensis HOM05D006334 ORTHO05D008320 2.2e-42 177.2 108 83.3
CBR_g8852 Chara braunii HOM05D006334 ORTHO05D008320 2.3e-39 167.2 123 62.6
Oeu032444.1 Olea europaea HOM05D006334 ORTHO05D008320 5.1e-31 139.4 77 85.7
Cpa.g.sc97.55 Carica papaya HOM05D006334 ORTHO05D008320 4.0e-28 129.8 106 84.0
Cre02.g101100 Chlamydomonas reinhardtii HOM05D006334 ORTHO05D008320 6.9e-28 129.0 119 54.6
ATR0697G296 Amborella trichopoda HOM05D006334 ORTHO05D008320 1.5e-27 127.9 111 74.8
FAN16G1435 Fragaria x ananassa HOM05D006334 ORTHO05D008320 8.7e-23 112.1 70 81.4
Cpa.g.sc97.53 Carica papaya HOM05D006334 ORTHO05D008320 1.5e-22 111.3 70 81.4
Haze_27349 Corylus avellana HOM05D006334 ORTHO05D008320 2.1e-21 107.5 167 45.5
FAN16G3226 Fragaria x ananassa HOM05D006334 ORTHO05D008320 2.0e-19 100.9 127 70.1
BcaC09g50615 Brassica carinata HOM05D006334 ORTHO05D008320 3.8e-18 96.7 60 80.0


User provided reference genes

Program Settings