Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G03635 Aquilegia oxysepala HOM05D005739 ORTHO05D007740 6.3e-140 500.7 251 100.0
TAR627G1089 Trochodendron aralioides HOM05D005739 ORTHO05D007740 1.7e-105 386.3 265 72.1
Atru.chr10.2176 Acer truncatum HOM05D005739 ORTHO05D007740 7.1e-99 364.4 267 66.7
Haze_06773 Corylus avellana HOM05D005739 ORTHO05D007740 2.1e-98 362.8 268 67.2
Cfa000251 Carpinus fangiana HOM05D005739 ORTHO05D007740 7.8e-98 360.9 268 67.2
Gohir.D06G153000 Gossypium hirsutum HOM05D005739 ORTHO05D007740 7.8e-98 360.9 258 68.6
Duzib235G0413 Durio zibethinus HOM05D005739 ORTHO05D007740 1.0e-97 360.5 258 68.2
Gorai.010G179000 Gossypium raimondii HOM05D005739 ORTHO05D007740 3.9e-97 358.6 258 68.2
Potri.011G000100 Populus trichocarpa HOM05D005739 ORTHO05D007740 6.6e-97 357.8 268 67.5
PSO832G4144 Papaver somniferum HOM05D005739 ORTHO05D007740 8.7e-97 357.5 268 68.3
Thecc.06G217300 Theobroma cacao HOM05D005739 ORTHO05D007740 1.1e-96 357.1 258 67.4
Ciclev10015698m.g Citrus clementina HOM05D005739 ORTHO05D007740 5.6e-96 354.8 268 68.3
QL05p074082 Quercus lobata HOM05D005739 ORTHO05D007740 5.6e-96 354.8 267 66.7
COL.COLO4_31742 Corchorus olitorius HOM05D005739 ORTHO05D007740 9.6e-96 354.0 258 67.8
Nn1g03584 Nelumbo nucifera HOM05D005739 ORTHO05D007740 9.6e-96 354.0 265 67.5
TWI38G1065 Tripterygium wilfordii HOM05D005739 ORTHO05D007740 1.3e-95 353.6 268 67.2
CiPaw.10G069300 Carya illinoinensis HOM05D005739 ORTHO05D007740 2.8e-95 352.4 268 66.0
Sabra11G0000600 Salix brachista HOM05D005739 ORTHO05D007740 2.8e-95 352.4 268 67.5
GSVIVG01012654001 Vitis vinifera HOM05D005739 ORTHO05D007740 3.6e-95 352.1 260 66.9
PSO210G3635 Papaver somniferum HOM05D005739 ORTHO05D007740 4.8e-95 351.7 268 67.2
AL6G48370 Arabidopsis lyrata HOM05D005739 ORTHO05D007740 6.2e-95 351.3 261 68.2
AT4G04880 Arabidopsis thaliana HOM05D005739 ORTHO05D007740 1.8e-94 349.7 261 68.2
Psat4g007680 Pisum sativum HOM05D005739 ORTHO05D007740 5.3e-94 348.2 271 64.2
CDE11G0579 Ceratophyllum demersum HOM05D005739 ORTHO05D007740 6.9e-94 347.8 252 69.4
Sp6g04100 Schrenkiella parvula HOM05D005739 ORTHO05D007740 6.9e-94 347.8 261 67.8
Carub.0006s3279 Capsella rubella HOM05D005739 ORTHO05D007740 1.2e-93 347.1 261 67.0
Lj1C1227G9 Lonicera japonica HOM05D005739 ORTHO05D007740 1.5e-93 346.7 266 64.3
A09p26050 Brassica napus HOM05D005739 ORTHO05D007740 2.0e-93 346.3 261 66.7
BraA09t38171Z Brassica rapa HOM05D005739 ORTHO05D007740 4.4e-93 345.1 261 66.3
TPR.G37091 Trifolium pratense HOM05D005739 ORTHO05D007740 4.4e-93 345.1 270 63.3
CsaV3_6G049150 Cucumis sativus L. HOM05D005739 ORTHO05D007740 7.6e-93 344.4 268 65.3
VMungo1215G0361 Vigna mungo HOM05D005739 ORTHO05D007740 7.6e-93 344.4 270 62.6
arahy.Tifrunner.gnm1.ann1.HAY2RB Arachis hypogaea HOM05D005739 ORTHO05D007740 9.9e-93 344.0 270 61.9
AUR62012674 Chenopodium quinoa HOM05D005739 ORTHO05D007740 1.3e-92 343.6 266 65.8
Sc06g0010750 Simmondsia chinensis HOM05D005739 ORTHO05D007740 1.3e-92 343.6 268 64.6
arahy.Tifrunner.gnm1.ann1.GPHX1M Arachis hypogaea HOM05D005739 ORTHO05D007740 1.7e-92 343.2 270 61.9
Lsat_1_v5_gn_4_60101 Lactuca sativa HOM05D005739 ORTHO05D007740 2.2e-92 342.8 256 64.5
EL10Ac8g20019 Beta vulgaris HOM05D005739 ORTHO05D007740 2.9e-92 342.4 268 63.1
BcaC04g21334 Brassica carinata HOM05D005739 ORTHO05D007740 2.9e-92 342.4 261 66.7
C09p33050 Brassica napus HOM05D005739 ORTHO05D007740 2.9e-92 342.4 261 66.7
BolC9t56140H Brassica oleracea HOM05D005739 ORTHO05D007740 3.8e-92 342.0 261 66.7
Phvul.003G077000 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 3.8e-92 342.0 270 61.9
CARHR252690 Cardamine hirsuta HOM05D005739 ORTHO05D007740 4.9e-92 341.7 261 67.4
Dinv13869 Davidia involucrata HOM05D005739 ORTHO05D007740 4.9e-92 341.7 268 63.4
HanXRQChr16g0515931 Helianthus annuus HOM05D005739 ORTHO05D007740 8.4e-92 340.9 259 64.1
DCAR_008137 Daucus carota HOM05D005739 ORTHO05D007740 1.1e-91 340.5 266 62.0
Eucgr.D01304 Eucalyptus grandis HOM05D005739 ORTHO05D007740 1.1e-91 340.5 268 64.2
SalBow8G1417 Salvia bowleyana HOM05D005739 ORTHO05D007740 1.1e-91 340.5 267 63.3
Aa31LG9G9620 Aethionema arabicum HOM05D005739 ORTHO05D007740 1.4e-91 340.1 259 65.6
Ca_21095_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 1.9e-91 339.7 272 62.1
Ca_30203_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 1.9e-91 339.7 272 62.1
Dinv17816 Davidia involucrata HOM05D005739 ORTHO05D007740 2.4e-91 339.3 267 63.3
Prupe.4G024100 Prunus persica HOM05D005739 ORTHO05D007740 2.4e-91 339.3 267 63.7
Thhalv10028765m.g Eutrema salsugineum HOM05D005739 ORTHO05D007740 4.2e-91 338.6 262 67.2
Hma1.2p1_0813F.1_g222580 Hydrangea macrophylla HOM05D005739 ORTHO05D007740 9.3e-91 337.4 268 64.6
Zm00001eb110820 Zea mays HOM05D005739 ORTHO05D007740 2.1e-90 336.3 264 62.9
ATR0752G010 Amborella trichopoda HOM05D005739 ORTHO05D007740 2.7e-90 335.9 268 65.3
MELO3C007380.2 Cucumis melo HOM05D005739 ORTHO05D007740 2.7e-90 335.9 268 63.8
ECA234G0122 Erigeron canadensis HOM05D005739 ORTHO05D007740 2.7e-90 335.9 257 65.0
Sed0020639 Sechium edule HOM05D005739 ORTHO05D007740 2.7e-90 335.9 271 62.4
HPP92_016316 Vanilla planifolia HOM05D005739 ORTHO05D007740 3.5e-90 335.5 266 63.2
CSS0045804 Camellia sinensis var. sinensis HOM05D005739 ORTHO05D007740 4.6e-90 335.1 268 62.3
SGA_v2.0_scaffold4G01929 Striga asiatica HOM05D005739 ORTHO05D007740 4.6e-90 335.1 269 62.1
Glyma.07G258900 Glycine max HOM05D005739 ORTHO05D007740 6.0e-90 334.7 270 61.9
MSTRG.15974 Avicennia marina HOM05D005739 ORTHO05D007740 7.9e-90 334.3 267 62.5
AUR62021982 Chenopodium quinoa HOM05D005739 ORTHO05D007740 7.9e-90 334.3 299 58.9
Glyma.13G206500 Glycine max HOM05D005739 ORTHO05D007740 7.9e-90 334.3 265 63.0
Glyma.15G106200 Glycine max HOM05D005739 ORTHO05D007740 7.9e-90 334.3 265 63.0
RcHm_v2.0_Chr5g0003721 Rosa chinensis HOM05D005739 ORTHO05D007740 1.3e-89 333.6 268 62.7
MD10G1317700 Malus domestica HOM05D005739 ORTHO05D007740 1.7e-89 333.2 268 63.1
Nitab4.5_0007448g0040 Nicotiana tabacum HOM05D005739 ORTHO05D007740 1.7e-89 333.2 271 63.8
Actinidia11847 Actinidia chinensis HOM05D005739 ORTHO05D007740 2.3e-89 332.8 268 63.1
Migut.M01296 Erythranthe guttata HOM05D005739 ORTHO05D007740 2.3e-89 332.8 268 61.9
Lj6g0027190 Lotus japonicus HOM05D005739 ORTHO05D007740 2.3e-89 332.8 270 63.7
Oeu063902.1 Olea europaea HOM05D005739 ORTHO05D007740 2.3e-89 332.8 255 67.8
PGSC0003DMG400011257 Solanum tuberosum HOM05D005739 ORTHO05D007740 2.3e-89 332.8 271 62.7
Dinv20033 Davidia involucrata HOM05D005739 ORTHO05D007740 3.9e-89 332.0 292 59.6
Peaxi162Scf00203g01110 Petunia axillaris HOM05D005739 ORTHO05D007740 3.9e-89 332.0 265 64.2
Solyc10g005310.3 Solanum lycopersicum HOM05D005739 ORTHO05D007740 8.7e-89 330.9 271 62.4
BcaB01g01842 Brassica carinata HOM05D005739 ORTHO05D007740 1.1e-88 330.5 261 65.1
vmacro15817 Vaccinium macrocarpon HOM05D005739 ORTHO05D007740 1.9e-88 329.7 269 63.6
Rhsim02G0110500 Rhododendron simsii HOM05D005739 ORTHO05D007740 3.3e-88 328.9 269 62.5
PGR004G1404 Punica granatum HOM05D005739 ORTHO05D007740 5.6e-88 328.2 268 61.9
Nitab4.5_0002155g0060 Nicotiana tabacum HOM05D005739 ORTHO05D007740 7.3e-88 327.8 274 62.4
Cc09_g01940 Coffea canephora HOM05D005739 ORTHO05D007740 1.6e-87 326.6 260 63.8
CANSAT56G1696 Cannabis sativa HOM05D005739 ORTHO05D007740 2.1e-87 326.2 263 61.6
Ah.14g088100 Amaranthus hybridus HOM05D005739 ORTHO05D007740 3.6e-87 325.5 310 55.8
Os07g0661000 Oryza sativa ssp. japonica HOM05D005739 ORTHO05D007740 3.6e-87 325.5 263 62.0
VMungo0540G2038 Vigna mungo HOM05D005739 ORTHO05D007740 8.1e-87 324.3 264 62.1
Lalb_Chr20g0118561 Lupinus albus HOM05D005739 ORTHO05D007740 1.1e-86 323.9 271 61.6
FvH4_3g02490 Fragaria vesca HOM05D005739 ORTHO05D007740 1.8e-86 323.2 268 60.1
FAN25G0806 Fragaria x ananassa HOM05D005739 ORTHO05D007740 1.8e-86 323.2 264 60.6
Phvul.006G151100 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 9.0e-86 320.9 264 61.7
Sed0022137 Sechium edule HOM05D005739 ORTHO05D007740 1.2e-85 320.5 269 60.6
TPR.G7643 Trifolium pratense HOM05D005739 ORTHO05D007740 2.2e-84 316.2 264 60.6
SEGI_12484 Sequoiadendron giganteum HOM05D005739 ORTHO05D007740 2.9e-84 315.8 267 60.3
Ca_00625_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 6.4e-84 314.7 266 60.2
Gohir.A06G147200 Gossypium hirsutum HOM05D005739 ORTHO05D007740 6.4e-84 314.7 236 66.9
Psat1g181440 Pisum sativum HOM05D005739 ORTHO05D007740 8.4e-84 314.3 264 60.2
ClCG01G022090 Citrullus lanatus HOM05D005739 ORTHO05D007740 1.1e-83 313.9 268 61.2
Medtr2g022780 Medicago truncatula HOM05D005739 ORTHO05D007740 3.0e-81 305.8 263 59.7
Cpa.g.sc198.24 Carica papaya HOM05D005739 ORTHO05D007740 8.7e-81 304.3 244 65.6
THA.LOC104812968 Tarenaya hassleriana HOM05D005739 ORTHO05D007740 4.8e-79 298.5 243 63.8
Medtr4g131840 Medicago truncatula HOM05D005739 ORTHO05D007740 2.4e-78 296.2 246 61.4
HPP92_016297 Vanilla planifolia HOM05D005739 ORTHO05D007740 1.3e-76 290.4 227 63.9
SMO343G0036 Selaginella moellendorffii HOM05D005739 ORTHO05D007740 8.4e-76 287.7 253 57.3
MBI18_g35070_MAGBIO Magnolia biondii HOM05D005739 ORTHO05D007740 5.1e-73 278.5 223 64.6
Hund23487 Selenicereus undatus HOM05D005739 ORTHO05D007740 2.8e-71 272.7 265 56.2
Manes.16G010200 Manihot esculenta HOM05D005739 ORTHO05D007740 6.2e-71 271.6 219 63.0
Mapoly0023s0135 Marchantia polymorpha HOM05D005739 ORTHO05D007740 2.6e-69 266.2 242 56.2
unitig_92.g28118 Utricularia gibba HOM05D005739 ORTHO05D007740 9.7e-64 247.7 223 58.3
AagrBONN_evm.TU.Sc2ySwM_368.535 Anthoceros agrestis HOM05D005739 ORTHO05D007740 1.3e-60 237.3 247 49.8
Pp3c11_7970 Physcomitrium patens HOM05D005739 ORTHO05D007740 1.8e-54 216.9 196 57.1
arahy.Tifrunner.gnm1.ann1.H0U1UD Arachis hypogaea HOM05D005739 ORTHO05D007740 7.9e-50 201.4 262 45.8
arahy.Tifrunner.gnm1.ann1.Q9UH73 Arachis hypogaea HOM05D005739 ORTHO05D007740 1.1e-48 197.6 245 45.7
arahy.Tifrunner.gnm1.ann1.53BRPK Arachis hypogaea HOM05D005739 ORTHO05D007740 8.2e-47 191.4 175 56.6
MCO11G903 Micromonas commoda HOM05D005739 ORTHO05D007740 2.0e-45 186.8 246 43.9
CAN.G105.13 Capsicum annuum HOM05D005739 ORTHO05D007740 3.8e-44 182.6 172 57.6
arahy.Tifrunner.gnm1.ann1.FSQL8E Arachis hypogaea HOM05D005739 ORTHO05D007740 7.2e-43 178.3 244 44.3
Cre03.g161000 Chlamydomonas reinhardtii HOM05D005739 ORTHO05D007740 8.0e-42 174.9 361 33.2
Sopen10g001300 Solanum pennellii HOM05D005739 ORTHO05D007740 1.5e-40 170.6 165 54.5
arahy.Tifrunner.gnm1.ann1.KZ0328 Arachis hypogaea HOM05D005739 ORTHO05D007740 9.7e-40 167.9 241 43.2
arahy.Tifrunner.gnm1.ann1.7V36PE Arachis hypogaea HOM05D005739 ORTHO05D007740 9.1e-38 161.4 210 45.2
arahy.Tifrunner.gnm1.ann1.0E5R4V Arachis hypogaea HOM05D005739 ORTHO05D007740 5.9e-37 158.7 180 50.0
arahy.Tifrunner.gnm1.ann1.B9PES8 Arachis hypogaea HOM05D005739 ORTHO05D007740 3.2e-35 152.9 180 48.3
arahy.Tifrunner.gnm1.ann1.AD56MI Arachis hypogaea HOM05D005739 ORTHO05D083983 3.0e-33 146.4 242 39.3
arahy.Tifrunner.gnm1.ann1.39644B Arachis hypogaea HOM05D005739 ORTHO05D007740 7.7e-21 105.1 181 38.1
arahy.Tifrunner.gnm1.ann1.3ZZ8UM Arachis hypogaea HOM05D000187 ORTHO05D000230 3.0e-12 76.6 108 42.6
arahy.Tifrunner.gnm1.ann1.ZUJ3H1 Arachis hypogaea HOM05D005739 ORTHO05D083715 4.9e-07 59.3 35 71.4
Nn1g07096 Nelumbo nucifera HOM05D005739 ORTHO05D007740 2.4e-06 57.0 90 36.7


User provided reference genes

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