Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G03077 Aquilegia oxysepala HOM05D001270 ORTHO05D078695 1.8e-93 345.9 172 100.0
Aqoxy1G01475 Aquilegia oxysepala HOM05D001270 ORTHO05D001099 9.3e-26 120.9 97 64.9
TAR626G0550 Trochodendron aralioides HOM05D001270 ORTHO05D001099 4.5e-20 102.1 96 54.2
TAR626G1357 Trochodendron aralioides HOM05D001270 ORTHO05D001099 4.5e-20 102.1 96 54.2
CSS0042607 Camellia sinensis var. sinensis HOM05D001270 ORTHO05D001099 8.8e-16 87.8 95 48.4
CSS0038539 Camellia sinensis var. sinensis HOM05D001270 ORTHO05D001099 1.1e-15 87.4 95 48.4
TAR624G1248 Trochodendron aralioides HOM05D001270 ORTHO05D001099 1.5e-15 87.0 95 47.4
Atru.chr13.2017 Acer truncatum HOM05D001270 ORTHO05D001099 2.0e-15 86.7 96 44.8
PSO675G8356 Papaver somniferum HOM05D001270 ORTHO05D001099 2.0e-15 86.7 97 48.5
Lj1C1143G4 Lonicera japonica HOM05D001270 ORTHO05D001099 2.6e-15 86.3 97 50.5
DCAR_001326 Daucus carota HOM05D001270 ORTHO05D001099 7.4e-15 84.7 96 45.8
Actinidia22387 Actinidia chinensis HOM05D001270 ORTHO05D001099 1.3e-14 84.0 95 45.3
PSO541G2444 Papaver somniferum HOM05D001270 ORTHO05D001099 1.7e-14 83.6 97 46.4
Nn7g38124 Nelumbo nucifera HOM05D001270 ORTHO05D001099 3.7e-14 82.4 95 45.3
Rhsim13G0131700 Rhododendron simsii HOM05D001270 ORTHO05D001099 3.7e-14 82.4 95 47.4
MSTRG.16338 Avicennia marina HOM05D001270 ORTHO05D001099 4.8e-14 82.0 95 45.3
ECA232G1315 Erigeron canadensis HOM05D001270 ORTHO05D001099 4.8e-14 82.0 95 45.3
Migut.M01970 Erythranthe guttata HOM05D001270 ORTHO05D001099 4.8e-14 82.0 95 43.2
Cc09_g06340 Coffea canephora HOM05D001270 ORTHO05D001099 6.3e-14 81.6 95 46.3
Hma1.2p1_0040F.1_g025050 Hydrangea macrophylla HOM05D001270 ORTHO05D001099 6.3e-14 81.6 96 45.8
Lsat_1_v5_gn_8_141481 Lactuca sativa HOM05D001270 ORTHO05D001099 6.3e-14 81.6 95 45.3
HanXRQChr15g0487341 Helianthus annuus HOM05D001270 ORTHO05D001099 1.1e-13 80.9 95 45.3
PGR119G1793 Punica granatum HOM05D001270 ORTHO05D001099 1.1e-13 80.9 96 43.8
Lsat_1_v5_gn_8_117740 Lactuca sativa HOM05D001270 ORTHO05D001099 1.4e-13 80.5 95 45.3
TWI63G0037 Tripterygium wilfordii HOM05D001270 ORTHO05D001099 1.4e-13 80.5 99 40.4
Lsat_1_v5_gn_7_25041 Lactuca sativa HOM05D001270 ORTHO05D001099 1.8e-13 80.1 95 46.3
CANSAT35G1995 Cannabis sativa HOM05D001270 ORTHO05D001099 3.1e-13 79.3 95 42.1
Potri.015G118500 Populus trichocarpa HOM05D001270 ORTHO05D001099 5.3e-13 78.6 93 41.9
Sc05g0005740 Simmondsia chinensis HOM05D001270 ORTHO05D001099 5.3e-13 78.6 96 43.8
Manes.16G059300 Manihot esculenta HOM05D001270 ORTHO05D001099 6.9e-13 78.2 93 41.9
SGA_v2.0_scaffold298G47679 Striga asiatica HOM05D001270 ORTHO05D001099 6.9e-13 78.2 95 42.1
MBI18_g24223_MAGBIO Magnolia biondii HOM05D001270 ORTHO05D001099 9.1e-13 77.8 88 45.5
Sopen02g018180 Solanum pennellii HOM05D001270 ORTHO05D001099 1.2e-12 77.4 93 44.1
Peaxi162Scf00149g00918 Petunia axillaris HOM05D001270 ORTHO05D001099 1.5e-12 77.0 93 43.0
Potri.015G119300 Populus trichocarpa HOM05D001270 ORTHO05D001099 1.5e-12 77.0 93 41.9
Sabra12G0088900 Salix brachista HOM05D001270 ORTHO05D001099 1.5e-12 77.0 95 42.1
Sabra15G0136700 Salix brachista HOM05D001270 ORTHO05D001099 1.5e-12 77.0 93 39.8
Cpa.g.sc135.33 Carica papaya HOM05D001270 ORTHO05D001099 2.0e-12 76.6 93 44.1
vmacro03506 Vaccinium macrocarpon HOM05D001270 ORTHO05D001099 2.0e-12 76.6 94 42.6
COL.COLO4_30979 Corchorus olitorius HOM05D001270 ORTHO05D001099 2.6e-12 76.3 95 37.9
Solyc02g069080.4 Solanum lycopersicum HOM05D001270 ORTHO05D001099 2.6e-12 76.3 93 43.0
PGSC0003DMG400010361 Solanum tuberosum HOM05D001270 ORTHO05D001099 2.6e-12 76.3 93 43.0
Thecc.06G140100 Theobroma cacao HOM05D001270 ORTHO05D001099 2.6e-12 76.3 95 40.0
Eucgr.E01893 Eucalyptus grandis HOM05D001270 ORTHO05D001099 3.4e-12 75.9 95 43.2
Nitab4.5_0002056g0040 Nicotiana tabacum HOM05D001270 ORTHO05D001099 4.5e-12 75.5 93 43.0
Nitab4.5_0003773g0090 Nicotiana tabacum HOM05D001270 ORTHO05D001099 4.5e-12 75.5 93 43.0
QL11p018085 Quercus lobata HOM05D001270 ORTHO05D001099 4.5e-12 75.5 95 41.1
Thecc.06G141000 Theobroma cacao HOM05D001270 ORTHO05D001099 4.5e-12 75.5 95 38.9
GSVIVG01012095001 Vitis vinifera HOM05D001270 ORTHO05D001099 4.5e-12 75.5 95 45.3
CiPaw.09G078800 Carya illinoinensis HOM05D001270 ORTHO05D001099 5.9e-12 75.1 95 40.0
Duzib192G0897 Durio zibethinus HOM05D001270 ORTHO05D001099 5.9e-12 75.1 93 39.8
Oeu050063.1 Olea europaea HOM05D001270 ORTHO05D001099 5.9e-12 75.1 95 41.1
Potri.012G120000 Populus trichocarpa HOM05D001270 ORTHO05D001099 5.9e-12 75.1 95 41.1
CiPaw.10G065200 Carya illinoinensis HOM05D001270 ORTHO05D001099 7.7e-12 74.7 90 41.1
Ciclev10014354m.g Citrus clementina HOM05D001270 ORTHO05D001099 7.7e-12 74.7 95 41.1
SalBow8G0281 Salvia bowleyana HOM05D001270 ORTHO05D001099 7.7e-12 74.7 95 42.1
SalBow8G5470 Salvia bowleyana HOM05D001270 ORTHO05D001099 7.7e-12 74.7 95 42.1
CAN.G1222.18 Capsicum annuum HOM05D001270 ORTHO05D001099 2.2e-11 73.2 93 41.9
Sed0015181 Sechium edule HOM05D001270 ORTHO05D001099 2.2e-11 73.2 95 40.0
ClCG01G009310 Citrullus lanatus HOM05D001270 ORTHO05D001099 2.9e-11 72.8 97 41.2
ATR0763G097 Amborella trichopoda HOM05D001270 ORTHO05D001099 5.0e-11 72.0 99 41.4
Gorai.010G168900 Gossypium raimondii HOM05D001270 ORTHO05D001099 5.0e-11 72.0 95 36.8
CsaV3_1G046570 Cucumis sativus L. HOM05D001270 ORTHO05D001099 6.5e-11 71.6 97 40.2
Prupe.4G110000 Prunus persica HOM05D001270 ORTHO05D001099 6.5e-11 71.6 95 40.0
MELO3C021771.2 Cucumis melo HOM05D001270 ORTHO05D001099 8.5e-11 71.2 97 40.2
Gohir.D06G145200 Gossypium hirsutum HOM05D001270 ORTHO05D001099 8.5e-11 71.2 95 36.8
FvH4_3g12130 Fragaria vesca HOM05D001270 ORTHO05D001099 1.1e-10 70.9 95 40.0
FAN21G2144 Fragaria x ananassa HOM05D001270 ORTHO05D001099 1.1e-10 70.9 95 40.0
Duzib235G0277 Durio zibethinus HOM05D001270 ORTHO05D001099 1.4e-10 70.5 93 36.6
Lalb_Chr05g0219751 Lupinus albus HOM05D001270 ORTHO05D001099 1.4e-10 70.5 103 37.9
MD05G1254700 Malus domestica HOM05D001270 ORTHO05D001099 1.4e-10 70.5 90 41.1
RcHm_v2.0_Chr5g0019861 Rosa chinensis HOM05D001270 ORTHO05D001099 1.4e-10 70.5 95 38.9
Lj4g0019362 Lotus japonicus HOM05D001270 ORTHO05D001099 2.5e-10 69.7 104 36.5
Medtr4g083940 Medicago truncatula HOM05D001270 ORTHO05D001099 2.5e-10 69.7 98 38.8
unitig_32.g11670 Utricularia gibba HOM05D001270 ORTHO05D001099 2.5e-10 69.7 95 37.9
Ca_18770_v3 Cicer arietinum L. HOM05D001270 ORTHO05D001099 3.2e-10 69.3 103 37.9
Gohir.A06G142333 Gossypium hirsutum HOM05D001270 ORTHO05D001099 3.2e-10 69.3 95 35.8
MD10G1234800 Malus domestica HOM05D001270 ORTHO05D001099 3.2e-10 69.3 90 38.9
Psat7g130800 Pisum sativum HOM05D001270 ORTHO05D001099 3.2e-10 69.3 97 38.1
AUR62025054 Chenopodium quinoa HOM05D001270 ORTHO05D001099 5.5e-10 68.6 95 41.1
AUR62037137 Chenopodium quinoa HOM05D001270 ORTHO05D001099 5.5e-10 68.6 95 41.1
Cfa000724 Carpinus fangiana HOM05D001270 ORTHO05D001099 7.2e-10 68.2 90 38.9
TPR.G20981 Trifolium pratense HOM05D001270 ORTHO05D001099 7.2e-10 68.2 98 38.8
Ah.01g014570 Amaranthus hybridus HOM05D001270 ORTHO05D001099 9.4e-10 67.8 96 40.6
Phvul.002G099100 Phaseolus vulgaris HOM05D001270 ORTHO05D001099 1.6e-09 67.0 95 37.9
Haze_06022 Corylus avellana HOM05D001270 ORTHO05D001099 2.7e-09 66.2 90 37.8
Haze_06023 Corylus avellana HOM05D001270 ORTHO05D001099 2.7e-09 66.2 90 37.8
Glyma.07G222800 Glycine max HOM05D001270 ORTHO05D001099 2.7e-09 66.2 96 36.5
arahy.Tifrunner.gnm1.ann1.RB1MXI Arachis hypogaea HOM05D001270 ORTHO05D001099 3.6e-09 65.9 103 35.9
arahy.Tifrunner.gnm1.ann1.M2J0L9 Arachis hypogaea HOM05D001270 ORTHO05D001099 4.7e-09 65.5 103 35.9
Lalb_Chr16g0385291 Lupinus albus HOM05D001270 ORTHO05D001099 4.7e-09 65.5 103 35.0
VMungo0251G1176 Vigna mungo HOM05D001270 ORTHO05D001099 4.7e-09 65.5 95 36.8
SHI20910 Sapria himalayana HOM05D001270 ORTHO05D001099 1.4e-08 63.9 95 36.8
EL10Ac4g08648 Beta vulgaris HOM05D001270 ORTHO05D001099 3.0e-08 62.8 96 37.5
Aa31LG9G16030 Aethionema arabicum HOM05D001270 ORTHO05D001099 5.2e-08 62.0 101 38.6
Glyma.20G021700 Glycine max HOM05D001270 ORTHO05D001099 5.2e-08 62.0 96 35.4
AL1G20870 Arabidopsis lyrata HOM05D001270 ORTHO05D001099 1.1e-07 60.8 100 37.0
CARHR010280 Cardamine hirsuta HOM05D001270 ORTHO05D001099 1.5e-07 60.5 100 37.0
Lsat_1_v5_gn_1_46441 Lactuca sativa HOM05D001270 ORTHO05D001099 2.0e-07 60.1 79 40.5
AT1G10180 Arabidopsis thaliana HOM05D001270 ORTHO05D001099 2.6e-07 59.7 100 37.0
BcaC07g38554 Brassica carinata HOM05D001270 ORTHO05D001099 3.3e-07 59.3 100 36.0
THA.LOC104812712 Tarenaya hassleriana HOM05D001270 ORTHO05D001099 3.3e-07 59.3 93 35.5
Zm00001eb324620 Zea mays HOM05D001270 ORTHO05D001099 3.3e-07 59.3 88 31.8
Carub.0001s0959 Capsella rubella HOM05D001270 ORTHO05D001099 4.4e-07 58.9 100 36.0
CDE12G0568 Ceratophyllum demersum HOM05D001270 ORTHO05D001099 4.4e-07 58.9 89 36.0
Os07g0568000 Oryza sativa ssp. japonica HOM05D001270 ORTHO05D001099 4.4e-07 58.9 88 31.8
BcaC07g38552 Brassica carinata HOM05D001270 ORTHO05D001099 7.4e-07 58.2 100 35.0
A08p34140 Brassica napus HOM05D001270 ORTHO05D001099 7.4e-07 58.2 100 35.0
C08p13450 Brassica napus HOM05D001270 ORTHO05D001099 7.4e-07 58.2 100 35.0
BolC8t48975H Brassica oleracea HOM05D001270 ORTHO05D001099 7.4e-07 58.2 100 35.0
Thhalv10006875m.g Eutrema salsugineum HOM05D001270 ORTHO05D001099 7.4e-07 58.2 94 36.2
Sp1g08810 Schrenkiella parvula HOM05D001270 ORTHO05D001099 7.4e-07 58.2 94 36.2
FAN23G1154 Fragaria x ananassa HOM05D001270 ORTHO05D001099 1.3e-06 57.4 99 37.4
HanXRQChr14g0446501 Helianthus annuus HOM05D001270 ORTHO05D224801 1.7e-06 57.0 101 35.6
Actinidia12731 Actinidia chinensis HOM05D001270 ORTHO05D001099 2.2e-06 56.6 95 35.8
HPP92_012533 Vanilla planifolia HOM05D001270 ORTHO05D001099 4.8e-06 55.5 100 32.0
BraA08t35326Z Brassica rapa HOM05D001270 ORTHO05D001099 8.2e-06 54.7 100 34.0


User provided reference genes

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