Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G03069 Aquilegia oxysepala HOM05D004677 ORTHO05D005746 1.6e-155 552.7 281 100.0
TAR629G2143 Trochodendron aralioides HOM05D004677 ORTHO05D005746 9.6e-121 437.2 281 79.4
Actinidia09726 Actinidia chinensis HOM05D004677 ORTHO05D005746 6.9e-119 431.0 260 81.5
Dinv08753 Davidia involucrata HOM05D004677 ORTHO05D005746 9.0e-119 430.6 271 79.7
Hma1.2p1_0895F.1_g233790 Hydrangea macrophylla HOM05D004677 ORTHO05D005746 4.5e-118 428.3 271 77.1
Manes.13G068200 Manihot esculenta HOM05D004677 ORTHO05D005746 1.1e-116 423.7 254 79.9
QL08p032142 Quercus lobata HOM05D004677 ORTHO05D005746 1.4e-116 423.3 267 77.9
ATR0585G016 Amborella trichopoda HOM05D004677 ORTHO05D005746 9.3e-116 420.6 251 82.1
Lalb_Chr01g0023241 Lupinus albus HOM05D004677 ORTHO05D005746 1.2e-115 420.2 239 84.1
FvH4_6g42850 Fragaria vesca HOM05D004677 ORTHO05D005746 1.6e-115 419.9 253 80.2
FAN02G0422 Fragaria x ananassa HOM05D004677 ORTHO05D005746 1.6e-115 419.9 253 80.2
FAN05G4912 Fragaria x ananassa HOM05D004677 ORTHO05D005746 1.6e-115 419.9 253 80.2
Rhsim06G0164500 Rhododendron simsii HOM05D004677 ORTHO05D005746 2.1e-115 419.5 267 76.4
Potri.014G155200 Populus trichocarpa HOM05D004677 ORTHO05D005746 2.7e-115 419.1 249 79.5
MBI10_g43118_MAGBIO Magnolia biondii HOM05D004677 ORTHO05D005746 3.5e-115 418.7 278 75.5
PSO675G6993 Papaver somniferum HOM05D004677 ORTHO05D005746 7.9e-115 417.5 241 82.2
FAN14G2731 Fragaria x ananassa HOM05D004677 ORTHO05D005746 1.0e-114 417.2 253 79.4
PGR142G1137 Punica granatum HOM05D004677 ORTHO05D005746 1.0e-114 417.2 268 77.6
vmacro12188 Vaccinium macrocarpon HOM05D004677 ORTHO05D005746 1.3e-114 416.8 259 79.5
Atru.chr6.3221 Acer truncatum HOM05D004677 ORTHO05D005746 3.0e-114 415.6 272 75.0
arahy.Tifrunner.gnm1.ann1.5LK61T Arachis hypogaea HOM05D004677 ORTHO05D005746 3.0e-114 415.6 253 78.3
Hund06461 Selenicereus undatus HOM05D004677 ORTHO05D005746 3.0e-114 415.6 237 84.0
TWI18G0105 Tripterygium wilfordii HOM05D004677 ORTHO05D005746 3.9e-114 415.2 258 79.5
arahy.Tifrunner.gnm1.ann1.34K6GT Arachis hypogaea HOM05D004677 ORTHO05D005746 6.7e-114 414.5 253 79.1
TWI36G1343 Tripterygium wilfordii HOM05D004677 ORTHO05D005746 1.5e-113 413.3 241 80.5
VMungo1080G1602 Vigna mungo HOM05D004677 ORTHO05D005746 1.9e-113 412.9 241 80.5
Eucgr.K00785 Eucalyptus grandis HOM05D004677 ORTHO05D005746 2.5e-113 412.5 239 80.8
CiPaw.03G158200 Carya illinoinensis HOM05D004677 ORTHO05D005746 3.3e-113 412.1 276 75.0
COL.COLO4_20015 Corchorus olitorius HOM05D004677 ORTHO05D005746 3.3e-113 412.1 271 76.8
Cfa014357 Carpinus fangiana HOM05D004677 ORTHO05D005746 4.3e-113 411.8 248 80.6
Zm00001eb162930 Zea mays HOM05D004677 ORTHO05D005746 4.3e-113 411.8 254 78.7
Prupe.3G214600 Prunus persica HOM05D004677 ORTHO05D005746 7.4e-113 411.0 256 77.7
CSS0008737 Camellia sinensis var. sinensis HOM05D004677 ORTHO05D005746 9.6e-113 410.6 283 73.5
Ciclev10016206m.g Citrus clementina HOM05D004677 ORTHO05D005746 1.3e-112 410.2 248 78.6
Sc12g0002230 Simmondsia chinensis HOM05D004677 ORTHO05D005746 1.6e-112 409.8 259 78.4
RcHm_v2.0_Chr2g0158791 Rosa chinensis HOM05D004677 ORTHO05D005746 2.1e-112 409.5 257 77.0
AT2G32520 Arabidopsis thaliana HOM05D004677 ORTHO05D005746 3.7e-112 408.7 249 77.9
Glyma.12G192200 Glycine max HOM05D004677 ORTHO05D005746 6.3e-112 407.9 241 78.8
AL4G27910 Arabidopsis lyrata HOM05D004677 ORTHO05D005746 1.1e-111 407.1 249 77.5
Phvul.005G116100 Phaseolus vulgaris HOM05D004677 ORTHO05D005746 1.4e-111 406.8 241 80.1
Gorai.001G197600 Gossypium raimondii HOM05D004677 ORTHO05D005746 1.8e-111 406.4 272 75.7
BolC4t27678H Brassica oleracea HOM05D004677 ORTHO05D005746 3.1e-111 405.6 244 78.3
BraA04t18010Z Brassica rapa HOM05D004677 ORTHO05D005746 3.1e-111 405.6 244 78.3
Gohir.D07G176800 Gossypium hirsutum HOM05D004677 ORTHO05D005746 3.1e-111 405.6 277 74.4
HanXRQChr03g0073261 Helianthus annuus HOM05D004677 ORTHO05D005746 3.1e-111 405.6 260 76.5
CANSAT64G2258 Cannabis sativa HOM05D004677 ORTHO05D005746 4.1e-111 405.2 278 71.6
Thhalv10017055m.g Eutrema salsugineum HOM05D004677 ORTHO05D005746 4.1e-111 405.2 249 76.7
BcaC02g07915 Brassica carinata HOM05D004677 ORTHO05D005746 5.3e-111 404.8 244 77.9
C04p62010 Brassica napus HOM05D004677 ORTHO05D005746 5.3e-111 404.8 244 77.9
CsaV3_7G003450 Cucumis sativus L. HOM05D004677 ORTHO05D005746 9.0e-111 404.1 275 72.7
Glyma.06G307800 Glycine max HOM05D004677 ORTHO05D005746 9.0e-111 404.1 253 76.7
Lj3g0003247 Lotus japonicus HOM05D004677 ORTHO05D005746 9.0e-111 404.1 238 79.4
Sed0004392 Sechium edule HOM05D004677 ORTHO05D005746 1.2e-110 403.7 273 73.6
Aa31LG5G4780 Aethionema arabicum HOM05D004677 ORTHO05D005746 2.6e-110 402.5 276 72.8
Duzib133G0523 Durio zibethinus HOM05D004677 ORTHO05D005746 4.5e-110 401.7 280 73.6
EL10Ac9g22065 Beta vulgaris HOM05D004677 ORTHO05D005746 5.9e-110 401.4 279 73.5
CARHR126350 Cardamine hirsuta HOM05D004677 ORTHO05D005746 5.9e-110 401.4 237 78.1
AUR62027103 Chenopodium quinoa HOM05D004677 ORTHO05D005746 7.6e-110 401.0 254 77.2
AUR62012879 Chenopodium quinoa HOM05D004677 ORTHO05D005746 1.0e-109 400.6 254 77.6
A04p24990 Brassica napus HOM05D004677 ORTHO05D005746 1.3e-109 400.2 237 79.3
MELO3C018827.2 Cucumis melo HOM05D004677 ORTHO05D005746 1.7e-109 399.8 275 72.4
DCAR_019755 Daucus carota HOM05D004677 ORTHO05D005746 1.7e-109 399.8 237 79.3
THA.LOC104800998 Tarenaya hassleriana HOM05D004677 ORTHO05D005746 3.8e-109 398.7 259 75.7
BcaB06g28600 Brassica carinata HOM05D004677 ORTHO05D005746 5.0e-109 398.3 237 78.5
Medtr4g049830 Medicago truncatula HOM05D004677 ORTHO05D005746 5.0e-109 398.3 254 77.2
Hund00385 Selenicereus undatus HOM05D004677 ORTHO05D005746 6.5e-109 397.9 259 76.4
Carub.0004s1386 Capsella rubella HOM05D004677 ORTHO05D005746 8.5e-109 397.5 249 75.9
Ca_19496_v3 Cicer arietinum L. HOM05D004677 ORTHO05D005746 8.5e-109 397.5 277 73.3
ClCG02G002040 Citrullus lanatus HOM05D004677 ORTHO05D005746 8.5e-109 397.5 283 70.0
Lalb_Chr01g0005771 Lupinus albus HOM05D004677 ORTHO05D005746 8.5e-109 397.5 252 75.4
Oeu027244.1 Olea europaea HOM05D004677 ORTHO05D005746 8.5e-109 397.5 242 76.9
Sp4g14870 Schrenkiella parvula HOM05D004677 ORTHO05D005746 1.1e-108 397.1 237 78.5
MBI10_g41369_MAGBIO Magnolia biondii HOM05D004677 ORTHO05D005746 1.4e-108 396.7 278 72.7
Thecc.01G176700 Theobroma cacao HOM05D004677 ORTHO05D005746 1.9e-108 396.4 244 77.0
Os01g0531500 Oryza sativa ssp. japonica HOM05D004677 ORTHO05D005746 3.2e-108 395.6 244 77.5
Migut.M00416 Erythranthe guttata HOM05D004677 ORTHO05D005746 4.2e-108 395.2 251 76.9
FAN09G3259 Fragaria x ananassa HOM05D004677 ORTHO05D005746 4.2e-108 395.2 253 76.3
TPR.G4610 Trifolium pratense HOM05D004677 ORTHO05D005746 4.2e-108 395.2 254 76.8
Phvul.011G101800 Phaseolus vulgaris HOM05D004677 ORTHO05D005746 5.5e-108 394.8 259 76.1
Psat7g201040 Pisum sativum HOM05D004677 ORTHO05D005746 5.5e-108 394.8 250 78.0
VMungo1127G1216 Vigna mungo HOM05D004677 ORTHO05D005746 1.2e-107 393.7 254 75.6
C04p17150 Brassica napus HOM05D004677 ORTHO05D005746 2.1e-107 392.9 281 71.2
BolC4t23265H Brassica oleracea HOM05D004677 ORTHO05D005746 2.1e-107 392.9 281 71.2
Cc05_g03990 Coffea canephora HOM05D004677 ORTHO05D005746 2.1e-107 392.9 258 74.0
BcaC02g11313 Brassica carinata HOM05D004677 ORTHO05D005746 2.7e-107 392.5 281 71.2
BraA05t20266Z Brassica rapa HOM05D004677 ORTHO05D005746 7.9e-107 391.0 281 70.8
SEGI_04984 Sequoiadendron giganteum HOM05D004677 ORTHO05D005746 7.9e-107 391.0 280 71.1
A05p13260 Brassica napus HOM05D004677 ORTHO05D005746 1.3e-106 390.2 249 75.5
CDE02G1429 Ceratophyllum demersum HOM05D004677 ORTHO05D005746 1.3e-106 390.2 237 78.9
Sed0023389 Sechium edule HOM05D004677 ORTHO05D005746 1.3e-106 390.2 241 78.0
Haze_12810 Corylus avellana HOM05D004677 ORTHO05D005746 1.8e-106 389.8 221 83.3
Nitab4.5_0000006g0310 Nicotiana tabacum HOM05D004677 ORTHO05D005746 2.3e-106 389.4 260 74.6
Nitab4.5_0004702g0010 Nicotiana tabacum HOM05D004677 ORTHO05D005746 6.7e-106 387.9 260 73.8
Lj3g0012150 Lotus japonicus HOM05D004677 ORTHO05D005746 1.1e-105 387.1 240 74.2
Sopen05g026690 Solanum pennellii HOM05D004677 ORTHO05D005746 1.9e-105 386.3 257 73.2
Lsat_1_v5_gn_9_106900 Lactuca sativa HOM05D004677 ORTHO05D005746 3.3e-105 385.6 261 72.8
BcaB02g10464 Brassica carinata HOM05D004677 ORTHO05D005746 5.7e-105 384.8 237 76.4
MSTRG.14847 Avicennia marina HOM05D004677 ORTHO05D005746 2.2e-104 382.9 239 74.9
Peaxi162Scf00462g00089 Petunia axillaris HOM05D004677 ORTHO05D005746 1.2e-102 377.1 259 70.7
HanXRQChr15g0490311 Helianthus annuus HOM05D004677 ORTHO05D005746 2.6e-102 375.9 237 75.5
MBI10_g41368_MAGBIO Magnolia biondii HOM05D004677 ORTHO05D005746 1.0e-101 374.0 225 78.7
Gohir.A07G174750 Gossypium hirsutum HOM05D004677 ORTHO05D005746 1.3e-101 373.6 256 74.2
Lj1A770G43 Lonicera japonica HOM05D004677 ORTHO05D005746 3.8e-101 372.1 222 79.3
HPP92_020158 Vanilla planifolia HOM05D004677 ORTHO05D005746 5.0e-101 371.7 276 67.4
Sabra14G0117500 Salix brachista HOM05D004677 ORTHO05D005746 1.6e-99 366.7 380 52.4
Cpa.g.sc572.2 Carica papaya HOM05D004677 ORTHO05D005746 1.3e-96 357.1 290 65.9
ECA240G0706 Erigeron canadensis HOM05D004677 ORTHO05D005746 2.0e-94 349.7 223 74.9
SGA_v2.0_scaffold34G13862 Striga asiatica HOM05D004677 ORTHO05D005746 1.3e-93 347.1 269 66.9
MBI10_g35587_MAGBIO Magnolia biondii HOM05D004677 ORTHO05D005746 2.9e-93 345.9 242 69.8
SGA_v2.0_scaffold186G40184 Striga asiatica HOM05D004677 ORTHO05D005746 2.3e-90 336.3 263 65.8
Mapoly0043s0053 Marchantia polymorpha HOM05D004677 ORTHO05D005746 8.8e-90 334.3 244 68.4
SGA_v2.0_scaffold445G51724 Striga asiatica HOM05D004677 ORTHO05D005746 3.3e-89 332.4 258 64.0
Lsat_1_v5_gn_9_106880 Lactuca sativa HOM05D004677 ORTHO05D005746 3.1e-87 325.9 238 64.7
SMO351G0384 Selaginella moellendorffii HOM05D004677 ORTHO05D005746 1.0e-85 320.9 240 63.3
Pp3c16_5740 Physcomitrium patens HOM05D004677 ORTHO05D005746 3.2e-84 315.8 235 64.3
Lj3g0025926 Lotus japonicus HOM05D004677 ORTHO05D005746 4.2e-84 315.5 188 79.3
TAR627G1178 Trochodendron aralioides HOM05D004677 ORTHO05D005746 4.1e-79 298.9 191 75.9
CBR_g23740 Chara braunii HOM05D004677 ORTHO05D005746 2.0e-78 296.6 235 59.1
Solyc05g043430.4 Solanum lycopersicum HOM05D004677 ORTHO05D005746 7.7e-78 294.7 189 78.3
Oeu036746.3 Olea europaea HOM05D004677 ORTHO05D005746 3.2e-76 289.3 243 62.1
MD09G1072400 Malus domestica HOM05D004677 ORTHO05D005746 1.6e-75 287.0 223 65.0
Lj5g0020236 Lotus japonicus HOM05D004677 ORTHO05D005746 2.0e-73 280.0 241 58.5
SHI10364 Sapria himalayana HOM05D004677 ORTHO05D005746 2.6e-73 279.6 186 72.0
HPP92_020157 Vanilla planifolia HOM05D004677 ORTHO05D005746 9.5e-68 261.2 226 58.0
Lj2g0012873 Lotus japonicus HOM05D004677 ORTHO05D005746 5.7e-65 251.9 237 53.6
Lj2g0026590 Lotus japonicus HOM05D004677 ORTHO05D005746 1.3e-61 240.7 291 47.8
Nn1g03456 Nelumbo nucifera HOM05D004677 ORTHO05D005746 1.8e-58 230.3 167 71.9
AagrBONN_evm.TU.Sc2ySwM_117.68 Anthoceros agrestis HOM05D004677 ORTHO05D005746 3.0e-58 229.6 173 62.4
unitig_0.g733 Utricularia gibba HOM05D004677 ORTHO05D005746 4.6e-54 215.7 135 77.0
MD17G1099100 Malus domestica HOM05D004677 ORTHO05D005746 4.3e-52 209.1 124 79.8
Lj3g0001260 Lotus japonicus HOM05D004677 ORTHO05D005746 9.5e-52 208.0 278 43.5
MCO13G274 Micromonas commoda HOM05D004677 ORTHO05D005746 9.8e-49 198.0 228 42.5
CDE08G1094 Ceratophyllum demersum HOM05D004677 ORTHO05D005746 1.9e-47 193.7 124 75.8
CDE08G0164 Ceratophyllum demersum HOM05D004677 ORTHO05D005746 8.6e-45 184.9 112 76.8
PRCOL_00005478 Prasinoderma coloniale HOM05D004677 ORTHO05D005746 2.5e-44 183.3 219 44.7
Cre06.g294000 Chlamydomonas reinhardtii HOM05D004677 ORTHO05D005746 1.8e-42 177.2 219 41.1
Nn1g04350 Nelumbo nucifera HOM05D004677 ORTHO05D005746 5.2e-34 149.1 87 79.3
arahy.Tifrunner.gnm1.ann1.4D0QE2 Arachis hypogaea HOM05D004677 ORTHO05D005746 8.9e-34 148.3 117 66.7
SGA_v2.0_scaffold228G43250 Striga asiatica HOM05D004677 ORTHO05D005746 1.1e-31 141.4 106 64.2
arahy.Tifrunner.gnm1.ann1.IJK42W Arachis hypogaea HOM05D004677 ORTHO05D005746 8.7e-29 131.7 103 61.2
arahy.Tifrunner.gnm1.ann1.65RE86 Arachis hypogaea HOM05D004677 ORTHO05D005746 3.3e-28 129.8 72 79.2
MD17G1099200 Malus domestica HOM05D004677 ORTHO05D005746 1.2e-25 121.3 83 69.9
Cre06.g258600 Chlamydomonas reinhardtii HOM05D004677 ORTHO05D005746 7.6e-25 118.6 248 30.6
Nn3g18971 Nelumbo nucifera HOM05D004677 ORTHO05D005746 1.1e-23 114.8 68 75.0
DCAR_013148 Daucus carota HOM05D004677 ORTHO05D005746 1.2e-22 111.3 76 71.1
AagrBONN_evm.TU.Sc2ySwM_117.4165 Anthoceros agrestis HOM05D004677 ORTHO05D005746 1.9e-15 87.4 149 40.3
FAN09G2974 Fragaria x ananassa HOM05D004677 ORTHO05D005746 4.3e-12 76.3 43 81.4
arahy.Tifrunner.gnm1.ann1.B7RHXH Arachis hypogaea HOM05D004677 ORTHO05D005746 1.1e-10 71.6 39 82.1
Nitab4.5_0001463g0050 Nicotiana tabacum HOM05D003774 ORTHO05D009174 5.8e-09 65.9 225 27.1
arahy.Tifrunner.gnm1.ann1.G1NRGV Arachis hypogaea HOM05D004677 ORTHO05D005746 1.7e-08 64.3 68 50.0
Thecc.08G192500 Theobroma cacao HOM05D003774 ORTHO05D009174 1.7e-08 64.3 241 27.0
Pp3c3_11190 Physcomitrium patens HOM05D005182 ORTHO05D006631 2.2e-08 63.9 213 25.8
Aqoxy5G02648 Aquilegia oxysepala HOM05D003774 ORTHO05D009174 2.9e-08 63.5 210 28.1
Gohir.D13G122800 Gossypium hirsutum HOM05D003774 ORTHO05D009174 6.4e-08 62.4 241 26.6
Gorai.013G137800 Gossypium raimondii HOM05D003774 ORTHO05D009174 6.4e-08 62.4 241 26.6
Potri.019G079000 Populus trichocarpa HOM05D003774 ORTHO05D009174 1.9e-07 60.8 209 29.7
Gohir.A13G119000 Gossypium hirsutum HOM05D003774 ORTHO05D009174 4.2e-07 59.7 241 25.7
arahy.Tifrunner.gnm1.ann1.LRB7BH Arachis hypogaea HOM05D004677 ORTHO05D005746 5.5e-07 59.3 66 50.0
TWI59G1355 Tripterygium wilfordii HOM05D003774 ORTHO05D009174 5.5e-07 59.3 193 31.1
CANSAT25G3020 Cannabis sativa HOM05D003774 ORTHO05D009174 2.1e-06 57.4 202 30.2
Eucgr.F02990 Eucalyptus grandis HOM05D003774 ORTHO05D009174 2.1e-06 57.4 249 28.5
Ciclev10030258m.g Citrus clementina HOM05D004677 ORTHO05D005746 4.6e-06 56.2 35 74.3
AUR62023544 Chenopodium quinoa HOM05D003774 ORTHO05D009174 6.0e-06 55.8 192 27.1
Rhsim11G0052900 Rhododendron simsii HOM05D003774 ORTHO05D009174 6.0e-06 55.8 193 31.1
Prupe.1G555600 Prunus persica HOM05D003774 ORTHO05D009174 7.9e-06 55.5 190 28.4


User provided reference genes

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