Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G02807 Aquilegia oxysepala HOM05D008321 ORTHO05D003768 9.4e-148 526.9 287 100.0
RcHm_v2.0_Chr3g0458231 Rosa chinensis HOM05D007314 ORTHO05D003768 2.3e-21 107.1 182 39.6
RcHm_v2.0_Chr3g0460621 Rosa chinensis HOM05D007314 ORTHO05D003768 3.0e-21 106.7 284 29.6
CsaV3_3G006830 Cucumis sativus L. HOM05D007314 ORTHO05D003768 2.6e-20 103.6 299 27.4
Rhsim04G0083300 Rhododendron simsii HOM05D007314 ORTHO05D010380 3.4e-20 103.2 148 41.9
MELO3C008679.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.3e-19 101.3 245 31.8
FvH4_4g10363 Fragaria vesca HOM05D008321 ORTHO05D003768 3.2e-18 96.7 143 39.2
FvH4_4g16173 Fragaria vesca HOM05D008321 ORTHO05D003768 1.2e-17 94.7 147 36.7
RcHm_v2.0_Chr6g0269851 Rosa chinensis HOM05D008321 ORTHO05D003768 1.2e-17 94.7 190 34.7
Rhsim01G0136300 Rhododendron simsii HOM05D004909 ORTHO05D009316 3.5e-17 93.2 148 40.5
Sed0001060 Sechium edule HOM05D007314 ORTHO05D003768 3.9e-16 89.7 189 36.0
Aqoxy5G02986 Aquilegia oxysepala HOM05D007314 ORTHO05D000285 5.0e-16 89.4 101 46.5
MELO3C031887.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.1e-15 88.2 274 30.3
MELO3C035542.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.5e-15 87.8 264 29.9
FAN16G3103 Fragaria x ananassa HOM05D008321 ORTHO05D003768 4.3e-15 86.3 138 35.5
FvH4_3g32731 Fragaria vesca HOM05D008321 ORTHO05D003768 7.3e-15 85.5 147 34.7
CSS0038469 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 9.5e-15 85.1 273 27.5
CANSAT25G0318 Cannabis sativa HOM05D007314 ORTHO05D010380 9.5e-15 85.1 118 39.8
Rhsim03G0123400 Rhododendron simsii HOM05D007314 ORTHO05D010380 6.1e-14 82.4 180 33.9
FvH4_4g15323 Fragaria vesca HOM05D008321 ORTHO05D010380 1.8e-13 80.9 177 35.0
FvH4_6g17382 Fragaria vesca HOM05D008321 ORTHO05D003768 1.8e-13 80.9 147 32.7
Rhsim04G0152600 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.1e-13 80.1 154 37.7
FvH4_1g29233 Fragaria vesca HOM05D008321 ORTHO05D003768 8.9e-13 78.6 179 29.6
FvH4_5g37213 Fragaria vesca HOM05D008321 ORTHO05D010380 1.2e-12 78.2 184 34.8
CANSAT25G2929 Cannabis sativa HOM05D007314 ORTHO05D003768 1.5e-12 77.8 171 32.7
Sed0011740 Sechium edule HOM05D007314 ORTHO05D003768 4.4e-12 76.3 253 28.5
CSS0049472 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 1.3e-11 74.7 274 27.7
ClCG07G007690 Citrullus lanatus HOM05D000107 ORTHO05D000062 1.3e-11 74.7 99 42.4
MBI15_g36793_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.7e-11 74.3 130 37.7
Sed0001469 Sechium edule HOM05D007314 ORTHO05D003768 2.9e-11 73.6 84 51.2
Sed0011465 Sechium edule HOM05D007314 ORTHO05D003768 2.9e-11 73.6 84 51.2
ClCG05G014410 Citrullus lanatus HOM05D007314 ORTHO05D003768 3.7e-11 73.2 282 27.0
Rhsim01G0098700 Rhododendron simsii HOM05D007314 ORTHO05D010380 1.9e-10 70.9 92 47.8
CSS0010964 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 7.0e-10 68.9 180 28.3
Rhsim06G0121300 Rhododendron simsii HOM05D007314 ORTHO05D010380 9.2e-10 68.6 100 41.0
RcHm_v2.0_Chr2g0134701 Rosa chinensis HOM05D009091 ORTHO05D003768 9.2e-10 68.6 211 27.0
BolC4t24885H Brassica oleracea HOM05D031530 ORTHO05D023934 1.6e-09 67.8 114 37.7
FAN11G2121 Fragaria x ananassa HOM05D008321 ORTHO05D003768 2.0e-09 67.4 100 41.0
RcHm_v2.0_Chr4g0433611 Rosa chinensis HOM05D009091 ORTHO05D003768 2.0e-09 67.4 171 29.8
FAN08G2819 Fragaria x ananassa HOM05D008321 ORTHO05D003768 2.7e-09 67.0 132 34.8
Psat2g134520 Pisum sativum HOM05D002954 ORTHO05D003353 3.5e-09 66.6 144 30.6
MBI15_g16946_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 7.8e-09 65.5 130 35.4
PSO339G6242 Papaver somniferum HOM05D008526 ORTHO05D010380 7.8e-09 65.5 188 29.3
PSO339G2856 Papaver somniferum HOM05D008526 ORTHO05D010380 3.0e-08 63.5 188 27.7
ClCG11G015990 Citrullus lanatus HOM05D007314 ORTHO05D003768 3.9e-08 63.2 93 39.8
FvH4_6g20173 Fragaria vesca HOM05D008321 ORTHO05D010380 5.0e-08 62.8 119 39.5
FAN19G2766 Fragaria x ananassa HOM05D008321 ORTHO05D003768 5.0e-08 62.8 195 27.2
MBI11_g23345_MAGBIO Magnolia biondii HOM05D009042 ORTHO05D003170 5.0e-08 62.8 151 29.8
Rhsim01G0043800 Rhododendron simsii HOM05D007314 ORTHO05D003768 5.0e-08 62.8 162 30.2
MBI12_g03766_MAGBIO Magnolia biondii HOM05D009042 ORTHO05D003170 6.6e-08 62.4 134 30.6
PSO675G7499 Papaver somniferum HOM05D008526 ORTHO05D010380 6.6e-08 62.4 187 25.1
PGR044G2648 Punica granatum HOM05D000876 ORTHO05D000285 6.6e-08 62.4 137 31.4
MELO3C030512.2 Cucumis melo HOM05D007314 ORTHO05D003768 8.6e-08 62.0 98 38.8
MBI14_g08057_MAGBIO Magnolia biondii HOM05D009042 ORTHO05D003170 8.6e-08 62.0 134 30.6
Atru.chr7.467 Acer truncatum HOM05D000107 ORTHO05D000062 1.1e-07 61.6 183 27.9
PSO339G2614 Papaver somniferum HOM05D008526 ORTHO05D010380 1.5e-07 61.2 188 26.6
Aqoxy3G03529 Aquilegia oxysepala HOM05D007314 ORTHO05D003768 3.3e-07 60.1 31 71.0
FAN24G2086 Fragaria x ananassa HOM05D008321 ORTHO05D003768 3.3e-07 60.1 77 39.0
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 3.3e-07 60.1 178 32.6
FAN07G1237 Fragaria x ananassa HOM05D008321 ORTHO05D003768 5.6e-07 59.3 66 45.5
TAR376G0246 Trochodendron aralioides HOM05D001309 ORTHO05D000385 5.6e-07 59.3 171 28.1
Oeu029662.1 Olea europaea HOM05D009091 ORTHO05D003768 7.3e-07 58.9 129 31.8
CSS0035442 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D005970 9.5e-07 58.5 174 28.7
CSS0006329 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.2e-06 58.2 175 29.7
MELO3C029734.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.6e-06 57.8 89 39.3
TAR375G1128 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.6e-06 57.8 171 27.5
TAR633G1156 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.6e-06 57.8 171 27.5
FAN08G3223 Fragaria x ananassa HOM05D009091 ORTHO05D003768 2.1e-06 57.4 186 26.9
FAN18G1459 Fragaria x ananassa HOM05D008321 ORTHO05D003768 2.1e-06 57.4 145 26.9
Prupe.1G130900 Prunus persica HOM05D000539 ORTHO05D000233 2.1e-06 57.4 135 30.4
RcHm_v2.0_Chr3g0496631 Rosa chinensis HOM05D009091 ORTHO05D003768 2.1e-06 57.4 111 31.5
FAN21G0782 Fragaria x ananassa HOM05D008321 ORTHO05D003768 2.8e-06 57.0 85 40.0
FAN01G0361 Fragaria x ananassa HOM05D009091 ORTHO05D004377 4.7e-06 56.2 156 25.6
Oeu016711.1 Olea europaea HOM05D023826 ORTHO05D003768 4.7e-06 56.2 157 31.8
RcHm_v2.0_Chr7g0231331 Rosa chinensis HOM05D009091 ORTHO05D003768 4.7e-06 56.2 94 35.1
TAR629G2892 Trochodendron aralioides HOM05D001309 ORTHO05D000385 4.7e-06 56.2 131 29.8
FAN22G0652 Fragaria x ananassa HOM05D008321 ORTHO05D003768 8.0e-06 55.5 98 34.7


User provided reference genes

Program Settings