Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G02771 Aquilegia oxysepala HOM05D000461 ORTHO05D009042 7.9e-135 483.8 246 100.0
Dinv08335 Davidia involucrata HOM05D000461 ORTHO05D009042 3.1e-67 259.2 214 65.4
CSS0025788 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D009042 3.5e-66 255.8 215 66.5
Nn1g03924 Nelumbo nucifera HOM05D000461 ORTHO05D009042 1.0e-65 254.2 176 73.3
CiPaw.11G175500 Carya illinoinensis HOM05D000461 ORTHO05D009042 4.7e-63 245.4 216 63.0
Cfa020516 Carpinus fangiana HOM05D000461 ORTHO05D009768 6.1e-63 245.0 215 63.3
Ciclev10009303m.g Citrus clementina HOM05D000461 ORTHO05D009042 8.0e-63 244.6 244 58.6
TAR626G1568 Trochodendron aralioides HOM05D000461 ORTHO05D009042 6.8e-62 241.5 257 55.3
Dinv22369 Davidia involucrata HOM05D000461 ORTHO05D009042 2.0e-61 240.0 263 56.3
Hma1.2p1_1003F.1_g246730 Hydrangea macrophylla HOM05D000461 ORTHO05D009042 2.2e-60 236.5 217 61.8
Cpa.g.sc80.106 Carica papaya HOM05D000461 ORTHO05D009042 3.7e-60 235.7 186 66.7
Ah.04g164980 Amaranthus hybridus HOM05D000461 ORTHO05D009042 8.3e-60 234.6 264 53.4
QL08p018706 Quercus lobata HOM05D000461 ORTHO05D009042 2.4e-59 233.0 218 59.6
RcHm_v2.0_Chr5g0035191 Rosa chinensis HOM05D000461 ORTHO05D009042 5.4e-59 231.9 215 59.5
QL93p2023_0091 Quercus lobata HOM05D000461 ORTHO05D009042 2.0e-58 229.9 218 59.2
Cc05_g12620 Coffea canephora HOM05D000461 ORTHO05D009042 2.7e-58 229.6 194 62.9
Solyc07g063530.3 Solanum lycopersicum HOM05D000461 ORTHO05D009042 4.6e-58 228.8 238 54.2
PGR031G2091 Punica granatum HOM05D000461 ORTHO05D009042 1.0e-57 227.6 191 64.4
Psat5g246400 Pisum sativum HOM05D000461 ORTHO05D009042 1.7e-57 226.9 213 57.3
THA.LOC104799911 Tarenaya hassleriana HOM05D000461 ORTHO05D009042 3.9e-57 225.7 183 62.3
COL.COLO4_09469 Corchorus olitorius HOM05D000461 ORTHO05D009768 6.6e-57 224.9 192 61.5
Atru.chr2.2831 Acer truncatum HOM05D000461 ORTHO05D009042 8.6e-57 224.6 244 54.1
CDE05G1014 Ceratophyllum demersum HOM05D000461 ORTHO05D009042 1.1e-56 224.2 184 64.7
Eucgr.F03352 Eucalyptus grandis HOM05D000461 ORTHO05D009042 1.1e-56 224.2 224 55.8
Nitab4.5_0000297g0040 Nicotiana tabacum HOM05D000461 ORTHO05D009042 1.5e-56 223.8 221 55.2
TWI39G0508 Tripterygium wilfordii HOM05D000461 ORTHO05D009042 1.5e-56 223.8 220 55.9
Thecc.07G072900 Theobroma cacao HOM05D000461 ORTHO05D009042 2.5e-56 223.0 219 57.1
Duzib213G0849 Durio zibethinus HOM05D000461 ORTHO05D009042 4.3e-56 222.2 197 60.9
BcaC06g32696 Brassica carinata HOM05D000461 ORTHO05D009042 7.3e-56 221.5 209 59.3
Glyma.13G281300 Glycine max HOM05D000461 ORTHO05D009042 2.1e-55 219.9 219 57.1
Rhsim04G0018200 Rhododendron simsii HOM05D000461 ORTHO05D009042 2.1e-55 219.9 217 57.1
BolC7t46022H Brassica oleracea HOM05D000461 ORTHO05D009042 2.8e-55 219.5 209 58.9
Thhalv10026109m.g Eutrema salsugineum HOM05D000461 ORTHO05D009042 2.8e-55 219.5 177 64.4
Lalb_Chr25g0286691 Lupinus albus HOM05D000461 ORTHO05D009042 2.8e-55 219.5 209 57.4
Medtr2g080290 Medicago truncatula HOM05D000461 ORTHO05D009042 2.8e-55 219.5 214 56.5
Manes.03G116000 Manihot esculenta HOM05D000461 ORTHO05D009042 3.6e-55 219.2 223 56.5
AT4G27390 Arabidopsis thaliana HOM05D000461 ORTHO05D009042 4.7e-55 218.8 176 63.1
Carub.0007s1348 Capsella rubella HOM05D000461 ORTHO05D009042 4.7e-55 218.8 179 62.0
Prupe.4G189000 Prunus persica HOM05D000461 ORTHO05D009042 4.7e-55 218.8 224 57.1
Sp7g25320 Schrenkiella parvula HOM05D000461 ORTHO05D009042 4.7e-55 218.8 205 57.6
Sopen07g031710 Solanum pennellii HOM05D000461 ORTHO05D009042 4.7e-55 218.8 156 69.2
A03p57230 Brassica napus HOM05D000461 ORTHO05D009042 6.2e-55 218.4 207 58.9
BraA03t14789Z Brassica rapa HOM05D000461 ORTHO05D009042 6.2e-55 218.4 207 58.9
C07p55420 Brassica napus HOM05D000461 ORTHO05D009042 1.0e-54 217.6 209 58.4
CANSAT11G1238 Cannabis sativa HOM05D000461 ORTHO05D009042 1.4e-54 217.2 222 54.1
CARHR235060 Cardamine hirsuta HOM05D000461 ORTHO05D009042 3.1e-54 216.1 179 60.3
Phvul.005G086500 Phaseolus vulgaris HOM05D000461 ORTHO05D009042 3.1e-54 216.1 219 54.3
MSTRG.15210 Avicennia marina HOM05D000461 ORTHO05D009042 5.2e-54 215.3 174 62.1
PSO210G3087 Papaver somniferum HOM05D000461 ORTHO05D009042 1.2e-53 214.2 207 57.5
MD11G1238100 Malus domestica HOM05D000461 ORTHO05D009042 1.5e-53 213.8 237 53.6
TPR.G32851 Trifolium pratense HOM05D000461 ORTHO05D009042 3.4e-53 212.6 218 55.0
Glyma.12G220000 Glycine max HOM05D000461 ORTHO05D009042 5.8e-53 211.8 216 56.5
Sed0008890 Sechium edule HOM05D000461 ORTHO05D009042 7.5e-53 211.5 176 59.7
Potri.001G405800 Populus trichocarpa HOM05D000461 ORTHO05D009042 9.8e-53 211.1 225 54.7
Lalb_Chr01g0017011 Lupinus albus HOM05D000461 ORTHO05D009042 1.3e-52 210.7 222 53.6
Ca_29614_v3 Cicer arietinum L. HOM05D000461 ORTHO05D009042 3.7e-52 209.1 218 52.3
Migut.M00872 Erythranthe guttata HOM05D000461 ORTHO05D009042 6.4e-52 208.4 229 53.7
CsaV3_3G006020 Cucumis sativus L. HOM05D000461 ORTHO05D009042 1.1e-51 207.6 175 60.0
FAN21G1502 Fragaria x ananassa HOM05D000461 ORTHO05D009042 1.1e-51 207.6 210 56.2
Lsat_1_v5_gn_7_106400 Lactuca sativa HOM05D000461 ORTHO05D009042 1.1e-51 207.6 222 50.5
FAN11G0265 Fragaria x ananassa HOM05D000461 ORTHO05D009042 1.4e-51 207.2 190 58.9
FAN16G2536 Fragaria x ananassa HOM05D000461 ORTHO05D009042 3.2e-51 206.1 215 55.3
Aa31LG5G10130 Aethionema arabicum HOM05D000461 ORTHO05D009042 4.1e-51 205.7 184 59.2
AL7G25410 Arabidopsis lyrata HOM05D000461 ORTHO05D009042 5.4e-51 205.3 201 56.2
ClCG10G006570 Citrullus lanatus HOM05D000461 ORTHO05D009042 5.4e-51 205.3 176 59.7
arahy.Tifrunner.gnm1.ann1.IDBP1F Arachis hypogaea HOM05D000461 ORTHO05D009042 1.2e-50 204.1 218 52.3
GSVIVG01014422001 Vitis vinifera HOM05D000461 ORTHO05D009042 1.2e-50 204.1 143 69.2
arahy.Tifrunner.gnm1.ann1.20QRXD Arachis hypogaea HOM05D000461 ORTHO05D009042 2.7e-50 203.0 218 53.2
Sabra16G0269500 Salix brachista HOM05D000461 ORTHO05D009042 1.0e-49 201.1 216 53.2
Lj3g0027305 Lotus japonicus HOM05D000461 ORTHO05D009042 1.3e-49 200.7 262 46.6
MD03G1219800 Malus domestica HOM05D000461 ORTHO05D009042 1.3e-49 200.7 143 69.9
Actinidia25643 Actinidia chinensis HOM05D000461 ORTHO05D009042 3.0e-49 199.5 186 58.6
PSO832G2223 Papaver somniferum HOM05D000461 ORTHO05D009042 3.0e-49 199.5 205 54.6
Nitab4.5_0002565g0040 Nicotiana tabacum HOM05D000461 ORTHO05D009042 8.6e-49 198.0 205 55.1
Sc03g0009630 Simmondsia chinensis HOM05D000461 ORTHO05D009042 8.6e-49 198.0 206 52.4
Gohir.A01G068300 Gossypium hirsutum HOM05D000461 ORTHO05D009042 1.9e-48 196.8 146 67.1
Sabra16G0267700 Salix brachista HOM05D000461 ORTHO05D009042 1.9e-48 196.8 219 52.1
Actinidia18752 Actinidia chinensis HOM05D000461 ORTHO05D009042 7.3e-48 194.9 214 51.9
Gohir.D01G055600 Gossypium hirsutum HOM05D000461 ORTHO05D009042 1.2e-47 194.1 146 66.4
HanXRQChr11g0330871 Helianthus annuus HOM05D000461 ORTHO05D009042 2.1e-47 193.4 223 49.8
EL10Ac4g08079 Beta vulgaris HOM05D000461 ORTHO05D009042 1.1e-46 191.0 267 44.9
DCAR_013076 Daucus carota HOM05D000461 ORTHO05D009768 1.1e-46 191.0 178 55.6
Gorai.002G075700 Gossypium raimondii HOM05D000461 ORTHO05D009042 1.8e-46 190.3 149 65.8
SGA_v2.0_scaffold73G24312 Striga asiatica HOM05D000461 ORTHO05D009042 2.3e-46 189.9 175 56.6
Oeu005436.1 Olea europaea HOM05D000461 ORTHO05D009042 3.7e-44 182.6 126 69.0
AUR62029322 Chenopodium quinoa HOM05D000461 ORTHO05D009042 4.1e-43 179.1 264 46.6
Os05g0502500 Oryza sativa ssp. japonica HOM05D000461 ORTHO05D009042 5.4e-43 178.7 145 62.1
Zm00001eb352790 Zea mays HOM05D000461 ORTHO05D009042 9.2e-43 177.9 186 51.1
ECA236G1699 Erigeron canadensis HOM05D003383 ORTHO05D003890 4.6e-42 175.6 146 54.8
Peaxi162Scf01216g00058 Petunia axillaris HOM05D000461 ORTHO05D009042 1.3e-41 174.1 223 46.6
FvH4_3g20860 Fragaria vesca HOM05D000461 ORTHO05D009042 1.7e-41 173.7 136 65.4
HPP92_001809 Vanilla planifolia HOM05D000461 ORTHO05D009042 2.3e-41 173.3 133 60.9
vmacro09553 Vaccinium macrocarpon HOM05D000461 ORTHO05D009042 2.1e-39 166.8 308 39.3
AUR62015609 Chenopodium quinoa HOM05D000461 ORTHO05D009042 8.1e-39 164.9 255 42.7
Actinidia35273 Actinidia chinensis HOM05D000461 ORTHO05D009042 1.3e-36 157.5 216 49.1
Hund28424 Selenicereus undatus HOM05D000461 ORTHO05D009042 6.0e-34 148.7 208 45.2
Hund28429 Selenicereus undatus HOM05D000461 ORTHO05D009042 6.0e-34 148.7 208 45.2
CSS0035681 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D009042 1.1e-32 144.4 133 63.9
Mapoly0059s0039 Marchantia polymorpha HOM05D000461 ORTHO05D009042 2.5e-32 143.3 179 43.6
MELO3C016549.2 Cucumis melo HOM05D000461 ORTHO05D009042 5.2e-30 135.6 97 66.0
Haze_09518 Corylus avellana HOM05D000461 ORTHO05D009042 2.6e-29 133.3 248 41.1
PGSC0003DMG400019287 Solanum tuberosum HOM05D000461 ORTHO05D009042 2.6e-29 133.3 90 67.8
RcHm_v2.0_Chr5g0035211 Rosa chinensis HOM05D000461 ORTHO05D009042 5.8e-29 132.1 110 57.3
SMO347G0332 Selaginella moellendorffii HOM05D000461 ORTHO05D009042 8.4e-28 128.3 150 41.3
VMungo1080G0679 Vigna mungo HOM05D000461 ORTHO05D009042 1.4e-27 127.5 129 53.5
Hma1.2p1_1003F.1_g246740 Hydrangea macrophylla HOM05D000461 ORTHO05D009042 1.3e-23 114.4 83 65.1
CBR_g3118 Chara braunii HOM05D000461 ORTHO05D009042 3.6e-23 112.8 142 45.1
Pp3c5_7600 Physcomitrium patens HOM05D000461 ORTHO05D009042 1.8e-22 110.5 236 36.0
ATR0693G207 Amborella trichopoda HOM05D000461 ORTHO05D009042 2.4e-22 110.2 85 65.9
Manes.15G162800 Manihot esculenta HOM05D000461 ORTHO05D009042 3.8e-20 102.8 89 60.7
unitig_85.g27405 Utricularia gibba HOM05D000461 ORTHO05D009042 3.1e-14 83.2 146 38.4
MBI18_g11113_MAGBIO Magnolia biondii HOM05D000461 ORTHO05D009042 7.1e-11 72.0 56 62.5
MELO3C030131.2 Cucumis melo HOM05D004229 ORTHO05D025211 8.1e-07 58.5 93 39.8


User provided reference genes

Program Settings