Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G02741 Aquilegia oxysepala HOM05D000079 ORTHO05D006963 1.9e-92 342.4 168 100.0
Aqoxy1G03277 Aquilegia oxysepala HOM05D000079 ORTHO05D006963 2.0e-73 279.3 192 76.0
Aqoxy4G01662 Aquilegia oxysepala HOM05D000079 ORTHO05D006963 2.5e-68 262.3 192 74.0
Aqoxy4G00822 Aquilegia oxysepala HOM05D000079 ORTHO05D006963 2.9e-40 169.1 185 47.0
TAR633G1011 Trochodendron aralioides HOM05D000079 ORTHO05D006963 1.8e-34 149.8 183 43.7
Manes.01G234300 Manihot esculenta HOM05D000079 ORTHO05D006963 4.2e-31 138.7 180 40.0
Nn3g21932 Nelumbo nucifera HOM05D000079 ORTHO05D006963 1.6e-30 136.7 179 40.8
Ciclev10020149m.g Citrus clementina HOM05D000079 ORTHO05D006963 2.7e-30 136.0 168 42.3
GSVIVG01028257001 Vitis vinifera HOM05D000079 ORTHO05D006963 1.4e-29 133.7 174 41.4
CiPaw.07G124900 Carya illinoinensis HOM05D000079 ORTHO05D006963 6.8e-29 131.3 188 38.3
Potri.014G113600 Populus trichocarpa HOM05D000079 ORTHO05D006963 1.5e-28 130.2 171 38.6
Aqoxy7G01596 Aquilegia oxysepala HOM05D000079 ORTHO05D006963 2.0e-28 129.8 186 37.1
QL12p034578 Quercus lobata HOM05D000079 ORTHO05D006963 5.7e-28 128.3 174 37.9
Sabra14G0083700 Salix brachista HOM05D000079 ORTHO05D006963 9.8e-28 127.5 171 38.0
QL06p008636 Quercus lobata HOM05D000079 ORTHO05D006963 1.7e-27 126.7 174 37.9
COL.COLO4_23137 Corchorus olitorius HOM05D000079 ORTHO05D006963 2.2e-27 126.3 174 38.5
VMungo1383G1222 Vigna mungo HOM05D000079 ORTHO05D006963 2.2e-27 126.3 184 38.0
Eucgr.A01011 Eucalyptus grandis HOM05D000079 ORTHO05D006963 8.3e-27 124.4 174 37.4
DCAR_005720 Daucus carota HOM05D000079 ORTHO05D006963 1.8e-26 123.2 183 37.7
Nn8g40259 Nelumbo nucifera HOM05D000079 ORTHO05D006963 4.1e-26 122.1 181 36.5
arahy.Tifrunner.gnm1.ann1.J102QK Arachis hypogaea HOM05D000079 ORTHO05D006963 7.0e-26 121.3 178 39.3
Aa31LG10G16150 Aethionema arabicum HOM05D000079 ORTHO05D006963 1.2e-25 120.6 175 38.9
Lj1g0025967 Lotus japonicus HOM05D000079 ORTHO05D006963 1.6e-25 120.2 180 37.2
Oeu044760.1 Olea europaea HOM05D000079 ORTHO05D006963 1.6e-25 120.2 181 37.0
Phvul.001G217900 Phaseolus vulgaris HOM05D000079 ORTHO05D006963 2.0e-25 119.8 180 36.1
PGR042G3658 Punica granatum HOM05D000079 ORTHO05D006963 2.7e-25 119.4 182 37.4
Glyma.19G221100 Glycine max HOM05D000079 ORTHO05D006963 5.9e-25 118.2 180 38.3
Lj1A8T50 Lonicera japonica HOM05D000079 ORTHO05D006963 5.9e-25 118.2 178 36.5
Nn2g12719 Nelumbo nucifera HOM05D000079 ORTHO05D006963 5.9e-25 118.2 115 46.1
CARHR172500 Cardamine hirsuta HOM05D000079 ORTHO05D006963 7.7e-25 117.9 175 40.0
Duzib133G1345 Durio zibethinus HOM05D000079 ORTHO05D006963 7.7e-25 117.9 174 37.4
Gorai.007G116600 Gossypium raimondii HOM05D000079 ORTHO05D006963 7.7e-25 117.9 113 48.7
Actinidia21343 Actinidia chinensis HOM05D000079 ORTHO05D006963 1.3e-24 117.1 192 40.6
Gohir.D11G109000 Gossypium hirsutum HOM05D000079 ORTHO05D006963 1.3e-24 117.1 107 50.5
Thecc.01G324400 Theobroma cacao HOM05D000079 ORTHO05D006963 2.2e-24 116.3 174 36.2
AT3G62160 Arabidopsis thaliana HOM05D000079 ORTHO05D006963 2.9e-24 115.9 175 38.9
TWI59G0545 Tripterygium wilfordii HOM05D000079 ORTHO05D006963 3.8e-24 115.5 176 36.9
arahy.Tifrunner.gnm1.ann1.CGL534 Arachis hypogaea HOM05D000079 ORTHO05D006963 1.1e-23 114.0 176 38.1
Nn2g12711 Nelumbo nucifera HOM05D000079 ORTHO05D006963 1.5e-23 113.6 113 45.1
MBI18_g10382_MAGBIO Magnolia biondii HOM05D000079 ORTHO05D006963 2.5e-23 112.8 175 34.9
Cfa002269 Carpinus fangiana HOM05D000079 ORTHO05D006963 3.2e-23 112.5 184 34.2
Haze_05140 Corylus avellana HOM05D000079 ORTHO05D006963 3.2e-23 112.5 185 35.1
RcHm_v2.0_Chr3g0485971 Rosa chinensis HOM05D000079 ORTHO05D006963 9.4e-23 110.9 186 33.9
Sopen01g030080 Solanum pennellii HOM05D000079 ORTHO05D006963 2.7e-22 109.4 195 35.4
Haze_05139 Corylus avellana HOM05D000079 ORTHO05D006963 3.6e-22 109.0 186 33.9
Solyc01g068140.4 Solanum lycopersicum HOM05D000079 ORTHO05D006963 4.7e-22 108.6 195 34.9
FAN23G2729 Fragaria x ananassa HOM05D000079 ORTHO05D006963 1.0e-21 107.5 194 33.5
Lsat_1_v5_gn_9_6821 Lactuca sativa HOM05D000079 ORTHO05D006963 1.0e-21 107.5 179 33.5
Nitab4.5_0008976g0010 Nicotiana tabacum HOM05D000079 ORTHO05D006963 1.4e-21 107.1 124 46.0
CSS0018134 Camellia sinensis var. sinensis HOM05D000079 ORTHO05D006963 3.0e-21 105.9 116 47.4
Nitab4.5_0000222g0320 Nicotiana tabacum HOM05D000079 ORTHO05D006963 4.0e-21 105.5 219 32.9
FAN26G0306 Fragaria x ananassa HOM05D000079 ORTHO05D006963 5.2e-21 105.1 194 33.0
FvH4_1g26300 Fragaria vesca HOM05D000079 ORTHO05D006963 8.8e-21 104.4 194 33.0
Psat3g016920 Pisum sativum HOM05D000079 ORTHO05D006963 8.8e-21 104.4 186 32.8
Cfa004901 Carpinus fangiana HOM05D000068 ORTHO05D000084 1.2e-20 104.0 126 42.1
HanXRQChr10g0285701 Helianthus annuus HOM05D000079 ORTHO05D006963 1.2e-20 104.0 179 33.5
Sed0014316 Sechium edule HOM05D000079 ORTHO05D006963 1.2e-20 104.0 123 48.0
Atru.chr5.875 Acer truncatum HOM05D000079 ORTHO05D006963 1.5e-20 103.6 93 48.4
ECA247G3863 Erigeron canadensis HOM05D000079 ORTHO05D006963 1.5e-20 103.6 112 45.5
PGSC0003DMG400005207 Solanum tuberosum HOM05D000079 ORTHO05D006963 1.5e-20 103.6 114 47.4
FAN19G2922 Fragaria x ananassa HOM05D000079 ORTHO05D006963 2.0e-20 103.2 136 40.4
ClCG11G013210 Citrullus lanatus HOM05D000079 ORTHO05D006963 2.6e-20 102.8 173 34.7
ATR0796G319 Amborella trichopoda HOM05D000079 ORTHO05D006963 4.4e-20 102.1 184 32.1
Cc07_g12350 Coffea canephora HOM05D000079 ORTHO05D006963 7.5e-20 101.3 183 33.3
CANSAT25G1181 Cannabis sativa HOM05D000079 ORTHO05D006963 3.7e-19 99.0 109 45.9
Peaxi162Scf00309g01023 Petunia axillaris HOM05D000079 ORTHO05D006963 4.9e-19 98.6 133 40.6
Ca_09243_v3 Cicer arietinum L. HOM05D000079 ORTHO05D006963 6.3e-19 98.2 185 32.4
MELO3C011816.2 Cucumis melo HOM05D000079 ORTHO05D006963 1.4e-18 97.1 179 34.6
HPP92_026056 Vanilla planifolia HOM05D000079 ORTHO05D006963 1.4e-18 97.1 177 30.5
CsaV3_5G029730 Cucumis sativus L. HOM05D000079 ORTHO05D006963 1.8e-18 96.7 182 34.1
HPP92_001182 Vanilla planifolia HOM05D000079 ORTHO05D006963 5.9e-17 91.7 175 32.0
Os01g0291500 Oryza sativa ssp. japonica HOM05D000079 ORTHO05D006963 1.1e-15 87.4 195 27.7
Os05g0278500 Oryza sativa ssp. japonica HOM05D000079 ORTHO05D006963 1.5e-15 87.0 172 29.1
Nn5g30253 Nelumbo nucifera HOM05D000079 ORTHO05D006963 2.5e-15 86.3 181 32.6
Zm00001eb264250 Zea mays HOM05D000079 ORTHO05D006963 2.5e-15 86.3 176 27.3
Zm00001eb417450 Zea mays HOM05D000079 ORTHO05D006963 1.2e-14 84.0 181 28.7
Os05g0136900 Oryza sativa ssp. japonica HOM05D000079 ORTHO05D006963 1.0e-13 80.9 119 31.9
ATR0796G168 Amborella trichopoda HOM05D000079 ORTHO05D006963 8.9e-13 77.8 170 28.8
Cfa004900 Carpinus fangiana HOM05D000068 ORTHO05D000084 1.2e-12 77.4 101 39.6
Os01g0615300 Oryza sativa ssp. japonica HOM05D000079 ORTHO05D006963 1.5e-12 77.0 177 27.1
Zm00001eb162060 Zea mays HOM05D000079 ORTHO05D006963 2.0e-12 76.6 174 28.2
Medtr7g110610 Medicago truncatula HOM05D000079 ORTHO05D006963 4.4e-12 75.5 160 33.1
Zm00001eb122300 Zea mays HOM05D000079 ORTHO05D006963 9.8e-12 74.3 97 38.1
Zm00001eb385970 Zea mays HOM05D000079 ORTHO05D006963 9.8e-12 74.3 102 34.3
Zm00001eb282950 Zea mays HOM05D000079 ORTHO05D006963 1.3e-11 73.9 170 28.2
Zm00001eb347020 Zea mays HOM05D000079 ORTHO05D006963 2.2e-11 73.2 109 33.9
Os01g0179000 Oryza sativa ssp. japonica HOM05D000079 ORTHO05D006963 2.9e-11 72.8 166 27.7
Os05g0179300 Oryza sativa ssp. japonica HOM05D000079 ORTHO05D006963 2.9e-11 72.8 166 27.7
Zm00001eb358170 Zea mays HOM05D000079 ORTHO05D006963 1.4e-10 70.5 183 26.2
Zm00001eb121650 Zea mays HOM05D000079 ORTHO05D006963 3.9e-08 62.4 172 23.8
Os01g0615200 Oryza sativa ssp. japonica HOM05D000079 ORTHO05D006963 1.5e-07 60.5 105 30.5
Actinidia21344 Actinidia chinensis HOM05D000079 ORTHO05D006963 1.6e-06 57.0 132 35.6
Os01g0185300 Oryza sativa ssp. japonica HOM05D000079 ORTHO05D006963 3.6e-06 55.8 183 22.4


User provided reference genes

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