Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G02673 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 0.0e+00 1135.9 580 100.0
Aqoxy2G02196 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 6.7e-294 1013.4 534 97.4
TAR636G3589 Trochodendron aralioides HOM05D000751 ORTHO05D005618 1.6e-191 673.3 540 68.7
GSVIVG01010908001 Vitis vinifera HOM05D000751 ORTHO05D005618 1.2e-160 570.9 537 59.8
CSS0048015 Camellia sinensis var. sinensis HOM05D000751 ORTHO05D005618 5.3e-158 562.0 547 59.2
Aqoxy2G02322 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 1.6e-157 560.5 459 70.4
Actinidia06357 Actinidia chinensis HOM05D000751 ORTHO05D005618 3.5e-157 559.3 538 57.8
Hma1.2p1_0207F.1_g087810 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 8.0e-154 548.1 542 59.0
Prupe.1G079600 Prunus persica HOM05D000751 ORTHO05D005618 2.3e-153 546.6 532 56.6
Ciclev10030781m.g Citrus clementina HOM05D000751 ORTHO05D005618 2.3e-148 530.0 547 57.2
MBI16_g18209_MAGBIO Magnolia biondii HOM05D000751 ORTHO05D000889 6.6e-148 528.5 488 59.6
TWI38G2172 Tripterygium wilfordii HOM05D000751 ORTHO05D005618 6.6e-148 528.5 539 56.8
PSO478G0715 Papaver somniferum HOM05D000751 ORTHO05D005618 1.2e-146 524.2 536 56.5
MD03G1036400 Malus domestica HOM05D000751 ORTHO05D005618 2.8e-146 523.1 528 56.4
Nn8g40996 Nelumbo nucifera HOM05D000751 ORTHO05D005618 2.0e-144 516.9 487 58.5
Lsat_1_v5_gn_7_56501 Lactuca sativa HOM05D000751 ORTHO05D005618 2.3e-140 503.4 536 53.5
Rhsim01G0197100 Rhododendron simsii HOM05D000751 ORTHO05D005618 2.9e-140 503.1 598 51.2
Eucgr.A01411 Eucalyptus grandis HOM05D000751 ORTHO05D005618 1.1e-139 501.1 539 54.0
PSO017G1776 Papaver somniferum HOM05D000751 ORTHO05D005618 3.6e-138 496.1 542 54.6
CiPaw.14G110300 Carya illinoinensis HOM05D000751 ORTHO05D005618 4.4e-136 489.2 530 54.5
Duzib168G1036 Durio zibethinus HOM05D000751 ORTHO05D005618 3.7e-135 486.1 536 53.2
Potri.003G010000 Populus trichocarpa HOM05D000751 ORTHO05D005618 1.1e-134 484.6 450 59.1
Cfa016755 Carpinus fangiana HOM05D000751 ORTHO05D005618 3.2e-134 483.0 497 55.5
Manes.17G002500 Manihot esculenta HOM05D000751 ORTHO05D005618 1.0e-132 478.0 489 53.8
Thecc.09G180200 Theobroma cacao HOM05D000751 ORTHO05D005618 1.7e-132 477.2 532 53.0
CANSAT11G2085 Cannabis sativa HOM05D000751 ORTHO05D005618 1.9e-131 473.8 537 52.5
RcHm_v2.0_Chr4g0400251 Rosa chinensis HOM05D000751 ORTHO05D005618 9.5e-131 471.5 494 53.4
CsaV3_1G031770 Cucumis sativus L. HOM05D000751 ORTHO05D005618 1.2e-130 471.1 487 56.3
MELO3C017440.2 Cucumis melo HOM05D000751 ORTHO05D005618 1.4e-129 467.6 455 58.2
FvH4_4g07640 Fragaria vesca HOM05D000751 ORTHO05D005618 1.2e-128 464.5 552 51.1
Sed0012322 Sechium edule HOM05D000751 ORTHO05D005618 1.5e-128 464.2 497 53.3
FAN17G2112 Fragaria x ananassa HOM05D000751 ORTHO05D005618 2.0e-128 463.8 511 52.3
Nitab4.5_0000074g0030 Nicotiana tabacum HOM05D000751 ORTHO05D005618 3.4e-128 463.0 549 52.5
Peaxi162Scf00324g00731 Petunia axillaris HOM05D000751 ORTHO05D005618 3.4e-128 463.0 530 52.3
Gohir.D05G003900 Gossypium hirsutum HOM05D000751 ORTHO05D005618 1.3e-127 461.1 396 61.1
Cpa.g.sc86.27 Carica papaya HOM05D000751 ORTHO05D005618 1.7e-127 460.7 432 59.7
Gohir.A05G003500 Gossypium hirsutum HOM05D000751 ORTHO05D005618 4.9e-127 459.1 396 60.6
FAN07G1720 Fragaria x ananassa HOM05D000751 ORTHO05D005618 1.1e-126 458.0 520 51.3
Gorai.009G003500 Gossypium raimondii HOM05D000751 ORTHO05D005618 4.1e-126 456.1 393 60.6
DCAR_007397 Daucus carota HOM05D000751 ORTHO05D005618 1.6e-125 454.1 553 50.5
Cc06_g22130 Coffea canephora HOM05D000751 ORTHO05D005618 2.7e-125 453.4 490 51.8
Atru.chr11.2504 Acer truncatum HOM05D000751 ORTHO05D005618 4.6e-125 452.6 545 53.0
A08p30790 Brassica napus HOM05D000751 ORTHO05D005618 6.0e-125 452.2 533 51.2
MSTRG.26530 Avicennia marina HOM05D000751 ORTHO05D005618 5.1e-124 449.1 534 47.9
ATR0626G151 Amborella trichopoda HOM05D000751 ORTHO05D005618 5.6e-123 445.7 540 49.3
EL10Ac2g02594 Beta vulgaris HOM05D000751 ORTHO05D005618 2.1e-122 443.7 478 52.1
AL1G30040 Arabidopsis lyrata HOM05D000751 ORTHO05D005618 2.8e-122 443.4 535 50.1
EL10As14g24084 Beta vulgaris HOM05D000751 ORTHO05D005618 3.1e-121 439.9 480 51.0
Dinv26447 Davidia involucrata HOM05D000751 ORTHO05D005618 3.1e-121 439.9 449 57.5
AT1G17690 Arabidopsis thaliana HOM05D000751 ORTHO05D005618 5.2e-121 439.1 535 52.3
Cc06_g21130 Coffea canephora HOM05D000751 ORTHO05D005618 6.8e-121 438.7 394 58.6
Carub.0001s1742 Capsella rubella HOM05D000751 ORTHO05D005618 2.6e-120 436.8 539 50.1
Sopen07g005110 Solanum pennellii HOM05D000751 ORTHO05D005618 3.4e-120 436.4 553 49.0
Sc06g0007900 Simmondsia chinensis HOM05D000751 ORTHO05D005618 9.9e-120 434.9 317 67.8
HanXRQChr03g0068331 Helianthus annuus HOM05D000751 ORTHO05D005618 1.3e-119 434.5 527 49.5
Hund24686 Selenicereus undatus HOM05D000751 ORTHO05D005618 1.3e-119 434.5 554 47.5
Thhalv10006892m.g Eutrema salsugineum HOM05D000751 ORTHO05D005618 8.3e-119 431.8 533 50.1
Aa31LG7G2520 Aethionema arabicum HOM05D000751 ORTHO05D005618 1.1e-118 431.4 558 48.2
ECA240G3678 Erigeron canadensis HOM05D000751 ORTHO05D005618 1.1e-118 431.4 539 48.2
C08p18130 Brassica napus HOM05D000751 ORTHO05D005618 2.4e-118 430.3 539 49.0
THA.LOC104813512 Tarenaya hassleriana HOM05D000751 ORTHO05D005618 5.4e-118 429.1 541 49.5
BolC8t49447H Brassica oleracea HOM05D000751 ORTHO05D005618 2.7e-117 426.8 540 48.5
BraA08t35010Z Brassica rapa HOM05D000751 ORTHO05D005618 4.6e-117 426.0 532 49.2
AUR62030665 Chenopodium quinoa HOM05D000751 ORTHO05D005618 3.0e-116 423.3 322 63.7
AUR62014975 Chenopodium quinoa HOM05D000751 ORTHO05D005618 6.6e-116 422.2 439 52.4
Glyma.09G057700 Glycine max HOM05D000751 ORTHO05D005618 6.6e-116 422.2 458 53.9
Sp4g05240 Schrenkiella parvula HOM05D000751 ORTHO05D005618 1.5e-115 421.0 379 58.3
Nitab4.5_0008918g0010 Nicotiana tabacum HOM05D000751 ORTHO05D005618 3.3e-115 419.9 549 49.7
Migut.L01901 Erythranthe guttata HOM05D000751 ORTHO05D005618 4.3e-115 419.5 358 58.1
Lalb_Chr02g0148081 Lupinus albus HOM05D000751 ORTHO05D005618 4.3e-115 419.5 429 55.0
VMungo1309G0231 Vigna mungo HOM05D000751 ORTHO05D005618 8.1e-114 415.2 459 53.8
TPR.G9024 Trifolium pratense HOM05D000751 ORTHO05D005618 6.8e-113 412.1 428 54.4
Phvul.009G238100 Phaseolus vulgaris HOM05D000751 ORTHO05D005618 1.5e-112 411.0 457 53.4
vmacro08789 Vaccinium macrocarpon HOM05D000751 ORTHO05D005618 1.5e-112 411.0 796 38.3
Hma1.2p1_0909F.1_g235820 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 3.8e-111 406.4 564 47.9
ClCG06G013510 Citrullus lanatus HOM05D000751 ORTHO05D005618 4.9e-111 406.0 676 41.4
CARHR018290 Cardamine hirsuta HOM05D000751 ORTHO05D005618 9.3e-110 401.7 533 46.9
Medtr2g012650 Medicago truncatula HOM05D000751 ORTHO05D005618 2.7e-109 400.2 448 52.0
Lj6g0015551 Lotus japonicus HOM05D000751 ORTHO05D005618 1.3e-108 397.9 434 53.2
CAN.G193.38 Capsicum annuum HOM05D000751 ORTHO05D005618 3.0e-108 396.7 294 68.4
SalBow1G4534 Salvia bowleyana HOM05D000751 ORTHO05D005618 6.6e-108 395.6 378 53.7
CDE06G1960 Ceratophyllum demersum HOM05D000751 ORTHO05D005618 6.2e-106 389.0 504 47.6
Thhalv10023137m.g Eutrema salsugineum HOM05D000751 ORTHO05D005618 8.1e-106 388.7 548 47.4
Medtr2g036890 Medicago truncatula HOM05D000751 ORTHO05D005618 1.1e-105 388.3 527 46.5
SalBow6G0847 Salvia bowleyana HOM05D000751 ORTHO05D005618 1.2e-104 384.8 407 50.9
DCAR_007396 Daucus carota HOM05D000751 ORTHO05D005618 5.4e-102 375.9 373 53.9
unitig_8.g3549 Utricularia gibba HOM05D000751 ORTHO05D005618 9.3e-102 375.2 469 45.2
SGA_v2.0_scaffold595G53113 Striga asiatica HOM05D000751 ORTHO05D005618 1.6e-101 374.4 434 47.0
arahy.Tifrunner.gnm1.ann1.4Y102Q Arachis hypogaea HOM05D000751 ORTHO05D005618 2.1e-101 374.0 391 52.7
Oeu047314.3 Olea europaea HOM05D000751 ORTHO05D005618 3.0e-100 370.2 521 42.8
arahy.Tifrunner.gnm1.ann1.QPM7FK Arachis hypogaea HOM05D000751 ORTHO05D005618 5.6e-99 365.9 471 47.6
FAN12G3496 Fragaria x ananassa HOM05D000751 ORTHO05D005618 1.2e-93 348.2 552 43.7
Glyma.15G163800 Glycine max HOM05D000751 ORTHO05D005618 1.5e-91 341.3 285 63.5
Carub.0003s1065 Capsella rubella HOM05D000751 ORTHO05D005618 5.6e-91 339.3 507 44.2
COL.COLO4_25458 Corchorus olitorius HOM05D000751 ORTHO05D005618 1.3e-87 328.2 507 44.8
Os05g0295100 Oryza sativa ssp. japonica HOM05D000751 ORTHO05D005618 3.5e-85 320.1 396 47.7
Zm00001eb406370 Zea mays HOM05D000751 ORTHO05D005618 2.5e-83 313.9 448 43.1
SalBow6G2294 Salvia bowleyana HOM05D000751 ORTHO05D005618 4.3e-83 313.2 568 38.7
Ca_05496_v3 Cicer arietinum L. HOM05D000751 ORTHO05D005618 2.0e-80 304.3 323 53.9
SalBow6G6994 Salvia bowleyana HOM05D000751 ORTHO05D005618 5.5e-78 296.2 568 36.8
HPP92_028564 Vanilla planifolia HOM05D000751 ORTHO05D005618 1.8e-76 291.2 235 61.7
AagrBONN_evm.TU.Sc2ySwM_369.592 Anthoceros agrestis HOM05D000751 ORTHO05D005618 3.0e-76 290.4 549 38.1
Psat4g182200 Pisum sativum HOM05D000751 ORTHO05D005618 5.1e-76 289.7 284 56.7
Mapoly0074s0025 Marchantia polymorpha HOM05D000751 ORTHO05D005618 3.1e-73 280.4 486 38.1
SMO296G0020 Selaginella moellendorffii HOM05D000751 ORTHO05D005618 5.3e-73 279.6 388 41.8
Pp3c10_17670 Physcomitrium patens HOM05D000751 ORTHO05D005618 4.2e-70 270.0 547 35.6
CDE02G3188 Ceratophyllum demersum HOM05D000751 ORTHO05D005618 3.4e-64 250.4 183 69.4
Psat4g047120 Pisum sativum HOM05D000751 ORTHO05D005618 1.1e-59 235.3 204 61.8
SMO174G0270 Selaginella moellendorffii HOM05D000751 ORTHO05D005618 2.2e-58 231.1 266 47.7
Cc10_g11360 Coffea canephora HOM05D000751 ORTHO05D005618 2.4e-57 227.6 537 34.8
BcaB05g23995 Brassica carinata HOM05D000751 ORTHO05D005618 1.6e-56 224.9 420 35.7
Solyc07g009350.4 Solanum lycopersicum HOM05D000751 ORTHO05D005618 5.5e-54 216.5 376 42.0
CBR_g38171 Chara braunii HOM05D000751 ORTHO05D005618 6.1e-53 213.0 434 34.1
SEGI_01043 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 1.3e-50 205.3 197 54.8
MD13G1251200 Malus domestica HOM05D000751 ORTHO05D005618 3.7e-50 203.8 156 65.4
Haze_19748 Corylus avellana HOM05D000751 ORTHO05D005618 3.1e-49 200.7 336 42.0
BolC2t08163H Brassica oleracea HOM05D000751 ORTHO05D005618 3.5e-48 197.2 233 49.4
CAN.G266.4 Capsicum annuum HOM05D000751 ORTHO05D005618 1.9e-46 191.4 158 62.0
AUR62024882 Chenopodium quinoa HOM05D000751 ORTHO05D005618 3.2e-46 190.7 270 43.0
MCO16G456 Micromonas commoda HOM05D000751 ORTHO05D005618 4.7e-45 186.8 286 36.7
Medtr8g466500 Medicago truncatula HOM05D000751 ORTHO05D005618 1.0e-44 185.7 332 39.5
MD13G1251100 Malus domestica HOM05D000751 ORTHO05D005618 1.2e-43 182.2 357 37.5
Aqoxy125s004 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 1.5e-43 181.8 101 92.1
Aqoxy2G02180 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 1.5e-43 181.8 120 80.8
CAN.G266.3 Capsicum annuum HOM05D000751 ORTHO05D005618 2.6e-43 181.0 232 46.6
Medtr4g415340 Medicago truncatula HOM05D000751 ORTHO05D005618 4.1e-41 173.7 295 42.7
PRCOL_00003641 Prasinoderma coloniale HOM05D000751 ORTHO05D005618 2.0e-40 171.4 327 33.9
BcaC03g14585 Brassica carinata HOM05D000751 ORTHO05D005618 2.5e-38 164.5 225 44.9
Cre04.g218300 Chlamydomonas reinhardtii HOM05D000751 ORTHO05D005618 2.5e-38 164.5 204 41.7
Sc06g0007910 Simmondsia chinensis HOM05D000751 ORTHO05D005618 1.7e-34 151.8 289 40.8
Hma1.2p1_2432F.1_g322050 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 3.7e-34 150.6 284 41.5
Cfa022413 Carpinus fangiana HOM05D000751 ORTHO05D005618 1.8e-33 148.3 541 29.0
Nn2g10858 Nelumbo nucifera HOM05D000751 ORTHO05D005618 6.6e-23 113.2 65 83.1
Hma1.2p1_2432F.1_g322060 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 1.0e-20 105.9 85 61.2
Hma1.2p1_2432F.1_g322070 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 1.5e-19 102.1 94 58.5
SEGI_01614 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 9.8e-19 99.4 68 64.7
SEGI_35111 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 9.8e-19 99.4 68 64.7
Sabra15G0073700 Salix brachista HOM05D000810 ORTHO05D005618 4.6e-16 90.5 211 31.8
HPP92_003077 Vanilla planifolia HOM05D000751 ORTHO05D005618 3.0e-15 87.8 86 51.2
Aqoxy1G00060 Aquilegia oxysepala HOM05D001339 ORTHO05D003609 6.6e-15 86.7 60 75.0
Cpa.g.sc86.29 Carica papaya HOM05D000751 ORTHO05D005618 8.6e-07 59.7 118 43.2
Aqoxy2G02182 Aquilegia oxysepala HOM05D000751 ORTHO05D078103 1.5e-06 58.9 47 72.3
Medtr8g466490 Medicago truncatula HOM05D000751 ORTHO05D005618 4.3e-06 57.4 49 49.0


User provided reference genes

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