Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G02470 Aquilegia oxysepala HOM05D006713 ORTHO05D008601 1.7e-235 818.9 398 100.0
TAR235G0002 Trochodendron aralioides HOM05D006713 ORTHO05D008601 7.4e-159 564.3 396 69.2
GSVIVG01020539001 Vitis vinifera HOM05D006713 ORTHO05D008601 2.3e-152 542.7 397 68.0
Dinv26425 Davidia involucrata HOM05D006713 ORTHO05D008601 1.8e-149 533.1 357 73.7
vmacro12297 Vaccinium macrocarpon HOM05D006713 ORTHO05D008601 2.0e-148 529.6 403 66.5
MBI06_g06484_MAGBIO Magnolia biondii HOM05D006713 ORTHO05D008601 4.5e-148 528.5 401 65.6
Nn1g06572 Nelumbo nucifera HOM05D006713 ORTHO05D008601 7.7e-148 527.7 394 66.2
Hma1.2p1_1201F.1_g266570 Hydrangea macrophylla HOM05D006713 ORTHO05D008601 1.3e-147 526.9 427 63.5
CSS0037354 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 6.5e-147 524.6 400 65.8
Rhsim06G0143600 Rhododendron simsii HOM05D006713 ORTHO05D008601 7.2e-146 521.2 400 64.8
QL02p049491 Quercus lobata HOM05D006713 ORTHO05D008601 3.6e-145 518.8 333 73.0
QL08p038662 Quercus lobata HOM05D006713 ORTHO05D008601 3.6e-145 518.8 365 68.8
Atru.chr6.3001 Acer truncatum HOM05D006713 ORTHO05D008601 1.8e-144 516.5 358 68.7
Gohir.D02G180200 Gossypium hirsutum HOM05D006713 ORTHO05D008601 4.8e-142 508.4 400 63.8
RcHm_v2.0_Chr2g0126401 Rosa chinensis HOM05D006713 ORTHO05D008601 2.4e-141 506.1 397 62.7
Eucgr.A01814 Eucalyptus grandis HOM05D006713 ORTHO05D008601 5.3e-141 505.0 403 61.8
Gorai.005G201900 Gossypium raimondii HOM05D006713 ORTHO05D008601 7.0e-141 504.6 400 63.2
FvH4_6g26190 Fragaria vesca HOM05D006713 ORTHO05D008601 1.2e-140 503.8 399 62.4
Gohir.A03G157000 Gossypium hirsutum HOM05D006713 ORTHO05D008601 1.2e-140 503.8 400 63.2
Lsat_1_v5_gn_8_133201 Lactuca sativa HOM05D006713 ORTHO05D008601 1.5e-140 503.4 357 68.6
CDE10G0241 Ceratophyllum demersum HOM05D006713 ORTHO05D008601 2.6e-140 502.7 343 67.6
Ciclev10015547m.g Citrus clementina HOM05D006713 ORTHO05D008601 2.6e-140 502.7 351 67.5
Sabra13G0111600 Salix brachista HOM05D006713 ORTHO05D008601 2.6e-140 502.7 424 62.0
Potri.013G132100 Populus trichocarpa HOM05D006713 ORTHO05D008601 5.9e-140 501.5 402 64.7
ECA234G3347 Erigeron canadensis HOM05D006713 ORTHO05D008601 1.3e-139 500.4 335 69.9
Solyc07g054070.4 Solanum lycopersicum HOM05D006713 ORTHO05D008601 8.5e-139 497.7 386 64.0
FAN05G2673 Fragaria x ananassa HOM05D006713 ORTHO05D008601 1.9e-138 496.5 399 61.7
HanXRQChr17g0556501 Helianthus annuus HOM05D006713 ORTHO05D008601 2.5e-138 496.1 355 66.5
Peaxi162Scf00132g00240 Petunia axillaris HOM05D006713 ORTHO05D008601 2.5e-138 496.1 353 67.7
CANSAT78G0617 Cannabis sativa HOM05D006713 ORTHO05D008601 4.2e-138 495.4 377 64.5
PGSC0003DMG400018345 Solanum tuberosum HOM05D006713 ORTHO05D008601 4.2e-138 495.4 357 67.2
TWI18G1058 Tripterygium wilfordii HOM05D006713 ORTHO05D008601 1.4e-136 490.3 392 62.8
FAN09G0901 Fragaria x ananassa HOM05D006713 ORTHO05D008601 9.7e-135 484.2 378 63.0
Glyma.13G297500 Glycine max HOM05D006713 ORTHO05D008601 9.7e-135 484.2 371 64.4
MD17G1241000 Malus domestica HOM05D006713 ORTHO05D008601 1.3e-134 483.8 400 62.5
CAN.G248.32 Capsicum annuum HOM05D006713 ORTHO05D008601 1.7e-134 483.4 334 68.0
Sc21g0002760 Simmondsia chinensis HOM05D006713 ORTHO05D008601 2.8e-134 482.6 327 67.6
FAN02G3934 Fragaria x ananassa HOM05D006713 ORTHO05D008601 6.3e-134 481.5 373 63.0
Actinidia09856 Actinidia chinensis HOM05D006713 ORTHO05D008601 8.2e-134 481.1 382 64.1
Ah.01g015180 Amaranthus hybridus HOM05D006713 ORTHO05D008601 1.8e-133 479.9 392 60.7
Lj3g0026133 Lotus japonicus HOM05D006713 ORTHO05D008601 9.1e-133 477.6 353 66.3
Duzib052G0863 Durio zibethinus HOM05D006713 ORTHO05D008601 1.2e-132 477.2 325 69.2
VMungo1080G0618 Vigna mungo HOM05D006713 ORTHO05D008601 3.5e-132 475.7 327 68.5
Lalb_Chr14g0366891 Lupinus albus HOM05D006713 ORTHO05D008601 1.7e-131 473.4 328 68.3
THA.LOC104815960 Tarenaya hassleriana HOM05D006713 ORTHO05D008601 2.2e-131 473.0 351 63.8
Cc05_g07100 Coffea canephora HOM05D006713 ORTHO05D008601 1.1e-130 470.7 357 63.3
arahy.Tifrunner.gnm1.ann1.Q4ZJSX Arachis hypogaea HOM05D006713 ORTHO05D008601 2.5e-130 469.5 394 60.2
EL10Ac9g20760 Beta vulgaris HOM05D006713 ORTHO05D008601 9.4e-130 467.6 431 56.4
AUR62038189 Chenopodium quinoa HOM05D006713 ORTHO05D008601 1.2e-129 467.2 368 62.8
DCAR_021241 Daucus carota HOM05D006713 ORTHO05D008601 6.1e-129 464.9 359 63.8
arahy.Tifrunner.gnm1.ann1.FW5TAU Arachis hypogaea HOM05D006713 ORTHO05D008601 2.3e-128 463.0 396 60.1
Cpa.g.sc34.156 Carica papaya HOM05D006713 ORTHO05D008601 3.0e-128 462.6 334 66.5
Medtr2g090335 Medicago truncatula HOM05D006713 ORTHO05D008601 3.0e-128 462.6 325 67.4
MSTRG.12823 Avicennia marina HOM05D006713 ORTHO05D008601 8.8e-128 461.1 336 64.9
CsaV3_6G012990 Cucumis sativus L. HOM05D006713 ORTHO05D008601 8.8e-128 461.1 398 60.8
Migut.H01188 Erythranthe guttata HOM05D006713 ORTHO05D008601 1.5e-127 460.3 402 59.0
HPP92_023892 Vanilla planifolia HOM05D006713 ORTHO05D008601 2.6e-127 459.5 330 64.2
HPP92_023829 Vanilla planifolia HOM05D006713 ORTHO05D008601 5.7e-127 458.4 330 63.9
Lj8A113G48 Lonicera japonica HOM05D006713 ORTHO05D008601 2.8e-126 456.1 405 58.5
CARHR003020 Cardamine hirsuta HOM05D006713 ORTHO05D008601 4.8e-126 455.3 340 64.1
Thhalv10007899m.g Eutrema salsugineum HOM05D006713 ORTHO05D008601 3.1e-125 452.6 350 63.4
Sp1g02570 Schrenkiella parvula HOM05D006713 ORTHO05D008601 3.1e-125 452.6 388 59.0
Psat5g271440 Pisum sativum HOM05D006713 ORTHO05D008601 4.1e-125 452.2 376 61.2
AT1G03687 Arabidopsis thaliana HOM05D006713 ORTHO05D008601 7.0e-125 451.4 333 64.6
AL1G13180 Arabidopsis lyrata HOM05D006713 ORTHO05D008601 9.1e-125 451.1 362 61.9
ATR0665G517 Amborella trichopoda HOM05D006713 ORTHO05D008601 2.7e-124 449.5 326 63.2
C08p52690 Brassica napus HOM05D006713 ORTHO05D008601 2.7e-124 449.5 356 61.8
Aa31LG1G20990 Aethionema arabicum HOM05D006713 ORTHO05D008601 3.5e-124 449.1 325 64.9
BcaC07g42233 Brassica carinata HOM05D006713 ORTHO05D008601 3.5e-124 449.1 332 63.6
Carub.0001s0279 Capsella rubella HOM05D006713 ORTHO05D008601 4.5e-124 448.7 332 63.9
BcaC07g42238 Brassica carinata HOM05D006713 ORTHO05D008601 1.0e-123 447.6 356 61.5
BolC8t52795H Brassica oleracea HOM05D006713 ORTHO05D008601 1.0e-123 447.6 356 61.5
A09p68250 Brassica napus HOM05D006713 ORTHO05D008601 3.8e-123 445.7 332 63.3
BraA09t42160Z Brassica rapa HOM05D006713 ORTHO05D008601 8.5e-123 444.5 356 61.0
PSO541G1719 Papaver somniferum HOM05D006713 ORTHO05D008601 1.5e-122 443.7 396 58.8
PSO675G6747 Papaver somniferum HOM05D006713 ORTHO05D008601 1.6e-121 440.3 396 58.3
Zm00001eb273220 Zea mays HOM05D006713 ORTHO05D008601 1.8e-120 436.8 329 61.1
Hund01101 Selenicereus undatus HOM05D006713 ORTHO05D008601 6.3e-118 428.3 452 51.3
CSS0039998 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 7.7e-116 421.4 332 64.2
Haze_13156 Corylus avellana HOM05D006713 ORTHO05D008601 2.8e-113 412.9 395 54.7
Nitab4.5_0002169g0110 Nicotiana tabacum HOM05D006713 ORTHO05D008601 2.8e-113 412.9 384 58.3
Prupe.3G137200 Prunus persica HOM05D006713 ORTHO05D008601 3.0e-112 409.5 397 54.2
Nitab4.5_0000512g0100 Nicotiana tabacum HOM05D006713 ORTHO05D008601 6.8e-112 408.3 366 59.8
Manes.12G089598 Manihot esculenta HOM05D006713 ORTHO05D008601 7.5e-111 404.8 327 63.9
ClCG02G017610 Citrullus lanatus HOM05D006713 ORTHO05D008601 5.0e-107 392.1 558 43.7
Phvul.005G104000 Phaseolus vulgaris HOM05D006713 ORTHO05D008601 9.5e-106 387.9 260 69.2
CiPaw.03G176500 Carya illinoinensis HOM05D006713 ORTHO05D008601 2.1e-105 386.7 299 65.6
Sopen07g028010 Solanum pennellii HOM05D006713 ORTHO05D008601 6.1e-105 385.2 283 64.3
Thecc.02G179100 Theobroma cacao HOM05D006713 ORTHO05D008601 8.9e-104 381.3 243 72.4
AUR62038063 Chenopodium quinoa HOM05D006713 ORTHO05D008601 2.9e-102 376.3 359 55.7
Ca_01502_v3 Cicer arietinum L. HOM05D006713 ORTHO05D008601 1.4e-101 374.0 334 57.5
unitig_62.g23167 Utricularia gibba HOM05D006713 ORTHO05D008601 1.1e-96 357.8 281 61.9
Sed0026559 Sechium edule HOM05D006713 ORTHO05D008601 7.5e-95 351.7 231 70.6
AagrBONN_evm.TU.Sc2ySwM_117.1346 Anthoceros agrestis HOM05D006713 ORTHO05D008601 3.9e-91 339.3 320 49.7
Mapoly0088s0019 Marchantia polymorpha HOM05D006713 ORTHO05D008601 1.2e-89 334.3 327 49.5
Os06g0342750 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 2.7e-84 316.6 232 59.9
MELO3C013617.2 Cucumis melo HOM05D006713 ORTHO05D008601 1.1e-80 304.7 365 46.6
Glyma.12G203966 Glycine max HOM05D006713 ORTHO05D008601 1.2e-76 291.2 165 77.6
SMO117G0197 Selaginella moellendorffii HOM05D006713 ORTHO05D008601 2.7e-76 290.0 327 45.3
SGA_v2.0_scaffold109G31136 Striga asiatica HOM05D006713 ORTHO05D007323 1.0e-75 288.1 440 41.6
SalBow1G6029 Salvia bowleyana HOM05D006713 ORTHO05D008601 2.3e-67 260.4 233 57.1
CBR_g35040 Chara braunii HOM05D006713 ORTHO05D008601 9.3e-61 238.4 351 38.7
SalBow1G1793 Salvia bowleyana HOM05D006713 ORTHO05D008601 2.2e-33 147.5 200 44.5
Glyma.12G204032 Glycine max HOM05D006713 ORTHO05D008601 2.6e-31 140.6 102 66.7
MELO3C001128.2 Cucumis melo HOM05D006713 ORTHO05D008601 3.8e-30 136.7 78 79.5
Os06g0343000 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 9.4e-29 132.1 100 62.0
SEGI_39135 Sequoiadendron giganteum HOM05D006713 ORTHO05D008601 4.0e-19 100.1 101 49.5
MELO3C013610.2 Cucumis melo HOM05D006713 ORTHO05D008601 9.7e-18 95.5 75 64.0
MELO3C013612.2 Cucumis melo HOM05D006713 ORTHO05D008601 8.0e-12 75.9 51 62.7
Oeu023431.1 Olea europaea HOM05D006713 ORTHO05D008601 1.8e-11 74.7 59 61.0
MELO3C035062.2 Cucumis melo HOM05D006713 ORTHO05D008601 1.5e-10 71.6 39 76.9
Oeu045818.1 Olea europaea HOM05D006713 ORTHO05D008601 1.8e-08 64.7 47 59.6
SEGI_34366 Sequoiadendron giganteum HOM05D006713 ORTHO05D008601 5.9e-07 59.7 66 40.9


User provided reference genes

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