Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G02199 Aquilegia oxysepala HOM05D006105 ORTHO05D006345 9.9e-250 866.3 435 100.0
TAR629G1657 Trochodendron aralioides HOM05D006105 ORTHO05D006345 1.1e-54 218.4 443 41.1
Nn1g09023 Nelumbo nucifera HOM05D006105 ORTHO05D006345 4.1e-54 216.5 464 40.1
PSO541G5705 Papaver somniferum HOM05D006105 ORTHO05D006345 6.4e-47 192.6 459 37.9
Actinidia35226 Actinidia chinensis HOM05D006105 ORTHO05D006345 9.2e-46 188.7 455 39.3
PSO675G6909 Papaver somniferum HOM05D006105 ORTHO05D006345 1.6e-45 188.0 460 37.0
TAR629G0423 Trochodendron aralioides HOM05D000109 ORTHO05D000965 5.1e-44 183.0 440 38.0
QL08p027367 Quercus lobata HOM05D006105 ORTHO05D006345 7.3e-43 179.1 424 36.6
MBI07_g17039_MAGBIO Magnolia biondii HOM05D006105 ORTHO05D006345 1.1e-41 175.3 418 35.2
Dinv14962 Davidia involucrata HOM05D006105 ORTHO05D006345 6.8e-41 172.6 393 38.4
Haze_09360 Corylus avellana HOM05D006105 ORTHO05D006345 8.9e-41 172.2 434 37.1
Prupe.4G171200 Prunus persica HOM05D006105 ORTHO05D006345 1.5e-40 171.4 472 36.4
Duzib213G0100 Durio zibethinus HOM05D006105 ORTHO05D006345 1.9e-38 164.5 465 34.2
Ciclev10010617m.g Citrus clementina HOM05D006105 ORTHO05D006345 2.4e-38 164.1 456 33.8
CSS0022090 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 3.2e-38 163.7 468 37.2
Actinidia18787 Actinidia chinensis HOM05D006105 ORTHO05D006345 1.6e-37 161.4 457 37.6
Manes.03G103501 Manihot esculenta HOM05D006105 ORTHO05D006345 2.1e-37 161.0 462 34.2
Hma1.2p1_0416F.1_g148610 Hydrangea macrophylla HOM05D006105 ORTHO05D006345 1.7e-36 157.9 448 36.4
GSVIVG01014239001 Vitis vinifera HOM05D006105 ORTHO05D006345 6.6e-36 156.0 411 35.0
Gohir.A08G021700 Gossypium hirsutum HOM05D006105 ORTHO05D006345 1.5e-35 154.8 443 33.0
Duzib268G0903 Durio zibethinus HOM05D006105 ORTHO05D006345 7.3e-35 152.5 448 33.5
Thecc.07G103600 Theobroma cacao HOM05D006105 ORTHO05D006345 3.6e-34 150.2 457 36.1
Gorai.004G029900 Gossypium raimondii HOM05D006105 ORTHO05D006345 6.2e-34 149.4 443 34.1
Gohir.D08G032500 Gossypium hirsutum HOM05D006105 ORTHO05D006345 1.1e-33 148.7 445 34.2
Cfa019604 Carpinus fangiana HOM05D006105 ORTHO05D006345 1.8e-33 147.9 429 35.0
CiPaw.12G115300 Carya illinoinensis HOM05D006105 ORTHO05D006345 2.0e-32 144.4 437 33.4
Cpa.g.sc131.73 Carica papaya HOM05D006105 ORTHO05D006345 3.4e-32 143.7 453 32.0
MELO3C025628.2 Cucumis melo HOM05D006105 ORTHO05D006345 3.4e-32 143.7 462 34.6
MD03G1238800 Malus domestica HOM05D006105 ORTHO05D006345 7.6e-32 142.5 449 34.7
CSS0026032 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 9.9e-32 142.1 455 36.5
Gorai.002G064700 Gossypium raimondii HOM05D006105 ORTHO05D006345 2.9e-31 140.6 452 33.0
CiPaw.11G164300 Carya illinoinensis HOM05D006105 ORTHO05D006345 4.9e-31 139.8 373 35.4
CsaV3_4G033280 Cucumis sativus L. HOM05D006105 ORTHO05D006345 6.4e-31 139.4 455 34.3
Hma1.2p1_0688F.1_g203660 Hydrangea macrophylla HOM05D006105 ORTHO05D006345 1.4e-30 138.3 421 33.5
FAN21G1974 Fragaria x ananassa HOM05D006105 ORTHO05D006345 2.4e-30 137.5 454 32.4
Dinv18338 Davidia involucrata HOM05D006105 ORTHO05D006345 3.2e-30 137.1 311 37.6
VMungo1080G1877 Vigna mungo HOM05D006105 ORTHO05D006345 3.2e-30 137.1 424 34.7
FvH4_3g18750 Fragaria vesca HOM05D006105 ORTHO05D006345 2.1e-29 134.4 460 30.9
FAN11G0448 Fragaria x ananassa HOM05D006105 ORTHO05D006345 2.1e-29 134.4 459 30.7
FAN25G1303 Fragaria x ananassa HOM05D006105 ORTHO05D006345 2.1e-29 134.4 462 31.0
COL.COLO4_17616 Corchorus olitorius HOM05D006105 ORTHO05D006345 4.6e-29 133.3 481 32.6
Gohir.D01G045100 Gossypium hirsutum HOM05D006105 ORTHO05D006345 6.0e-29 132.9 453 32.7
FAN16G1829 Fragaria x ananassa HOM05D006105 ORTHO05D006345 7.9e-29 132.5 462 30.7
Potri.001G375600 Populus trichocarpa HOM05D006105 ORTHO05D006345 7.9e-29 132.5 461 31.2
Phvul.005G068000 Phaseolus vulgaris HOM05D006105 ORTHO05D006345 2.3e-28 131.0 422 33.6
Sopen12g005900 Solanum pennellii HOM05D006105 ORTHO05D006345 2.3e-28 131.0 435 33.6
DCAR_019586 Daucus carota HOM05D006105 ORTHO05D006345 1.9e-27 127.9 355 35.2
RcHm_v2.0_Chr5g0031561 Rosa chinensis HOM05D006105 ORTHO05D006345 1.9e-27 127.9 451 30.6
ECA234G3938 Erigeron canadensis HOM05D006105 ORTHO05D006345 2.5e-27 127.5 475 33.7
Dinv17387 Davidia involucrata HOM05D006105 ORTHO05D006345 1.3e-26 125.2 458 31.7
Nitab4.5_0005445g0040 Nicotiana tabacum HOM05D006105 ORTHO05D006345 1.3e-26 125.2 435 32.4
TWI38G0440 Tripterygium wilfordii HOM05D006105 ORTHO05D006345 2.1e-26 124.4 428 33.4
PGSC0003DMG400015376 Solanum tuberosum HOM05D006105 ORTHO05D006345 2.8e-26 124.0 457 31.5
Rhsim04G0024000 Rhododendron simsii HOM05D006105 ORTHO05D006345 3.6e-26 123.6 437 33.6
Oeu005394.1 Olea europaea HOM05D006105 ORTHO05D006345 8.1e-26 122.5 434 32.9
Glyma.12G228100 Glycine max HOM05D006105 ORTHO05D006345 1.8e-25 121.3 441 33.6
ClCG11G017660 Citrullus lanatus HOM05D006105 ORTHO05D006345 2.4e-25 120.9 460 32.8
Peaxi162Scf00000g02515 Petunia axillaris HOM05D006105 ORTHO05D006345 5.3e-25 119.8 301 35.5
Rhsim06G0204700 Rhododendron simsii HOM05D006105 ORTHO05D006345 6.9e-25 119.4 462 32.9
Atru.chr2.2260 Acer truncatum HOM05D006105 ORTHO05D006345 1.5e-24 118.2 408 32.1
AUR62037870 Chenopodium quinoa HOM05D006105 ORTHO05D006345 7.6e-24 115.9 425 32.9
Actinidia07497 Actinidia chinensis HOM05D006105 ORTHO05D006345 9.9e-24 115.5 434 32.0
MD11G1258600 Malus domestica HOM05D006105 ORTHO05D006345 1.3e-23 115.2 453 30.7
Medtr2g078220 Medicago truncatula HOM05D006105 ORTHO05D006345 2.4e-22 110.9 450 28.2
Nn1g04330 Nelumbo nucifera HOM05D006105 ORTHO05D006345 4.2e-22 110.2 248 40.3
Sc03g0010360 Simmondsia chinensis HOM05D006105 ORTHO05D006345 4.2e-22 110.2 269 37.5
Glyma.13G271900 Glycine max HOM05D006105 ORTHO05D006345 9.3e-22 109.0 424 33.0
Lj3g0024128 Lotus japonicus HOM05D006105 ORTHO05D006345 9.3e-22 109.0 423 30.7
Nitab4.5_0003202g0040 Nicotiana tabacum HOM05D006105 ORTHO05D006345 1.6e-21 108.2 429 29.1
Aqoxy4G00493 Aquilegia oxysepala HOM05D006105 ORTHO05D006345 3.5e-21 107.1 483 28.8
Eucgr.F01202 Eucalyptus grandis HOM05D006105 ORTHO05D006345 7.9e-21 105.9 300 32.7
Lalb_Chr25g0286021 Lupinus albus HOM05D006105 ORTHO05D006345 7.9e-21 105.9 423 30.3
Gohir.A01G059000 Gossypium hirsutum HOM05D006105 ORTHO05D006345 1.3e-20 105.1 297 35.0
MSTRG.14950 Avicennia marina HOM05D006105 ORTHO05D006345 3.0e-20 104.0 445 29.9
Sed0005720 Sechium edule HOM05D006105 ORTHO05D006345 3.0e-20 104.0 431 31.3
TAR627G0886 Trochodendron aralioides HOM05D000157 ORTHO05D006345 5.1e-20 103.2 250 36.0
Gohir.A13G148200 Gossypium hirsutum HOM05D006105 ORTHO05D006345 1.9e-19 101.3 319 30.7
HanXRQChr10g0304731 Helianthus annuus HOM05D006105 ORTHO05D006345 3.3e-19 100.5 440 31.1
Cc05_g11450 Coffea canephora HOM05D006105 ORTHO05D006345 5.6e-19 99.8 258 32.2
AUR62019562 Chenopodium quinoa HOM05D006105 ORTHO05D006345 7.4e-19 99.4 438 32.0
Oeu059277.1 Olea europaea HOM05D006105 ORTHO05D006345 7.4e-19 99.4 429 31.7
DCAR_021012 Daucus carota HOM05D006105 ORTHO05D006345 9.6e-19 99.0 322 33.2
Glyma.06G232600 Glycine max HOM05D006105 ORTHO05D006345 1.3e-18 98.6 424 30.9
Psat5g240600 Pisum sativum HOM05D006105 ORTHO05D006345 1.6e-18 98.2 325 30.8
CSS0004572 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 2.8e-18 97.4 235 36.2
TWI39G0145 Tripterygium wilfordii HOM05D006105 ORTHO05D006345 2.8e-18 97.4 423 30.3
Sed0015488 Sechium edule HOM05D006105 ORTHO05D006345 3.7e-18 97.1 420 30.2
arahy.Tifrunner.gnm1.ann1.KE6FEG Arachis hypogaea HOM05D006105 ORTHO05D006345 1.1e-17 95.5 427 30.9
MSTRG.14216 Avicennia marina HOM05D006105 ORTHO05D006345 1.4e-17 95.1 433 29.6
DCAR_013141 Daucus carota HOM05D006105 ORTHO05D006345 1.8e-17 94.7 451 30.6
Lj8A152T79 Lonicera japonica HOM05D006105 ORTHO05D006345 3.1e-17 94.0 281 32.7
CsaV3_4G008420 Cucumis sativus L. HOM05D006105 ORTHO05D006345 4.0e-17 93.6 433 30.7
Manes.17G052800 Manihot esculenta HOM05D013066 ORTHO05D010890 9.0e-17 92.4 429 28.4
TPR.G9213 Trifolium pratense HOM05D006105 ORTHO05D006345 1.5e-16 91.7 476 28.2
arahy.Tifrunner.gnm1.ann1.LEI4AX Arachis hypogaea HOM05D006105 ORTHO05D006345 2.6e-16 90.9 435 29.9
Sabra16G0247400 Salix brachista HOM05D006105 ORTHO05D006345 2.6e-16 90.9 433 28.9
Nitab4.5_0000246g0110 Nicotiana tabacum HOM05D006105 ORTHO05D006345 5.8e-16 89.7 435 27.8
ClCG07G009910 Citrullus lanatus HOM05D006105 ORTHO05D006345 1.7e-15 88.2 414 31.2
arahy.Tifrunner.gnm1.ann1.TTJ9YL Arachis hypogaea HOM05D006105 ORTHO05D006345 2.2e-15 87.8 422 29.6
SGA_v2.0_scaffold73G24208 Striga asiatica HOM05D006105 ORTHO05D006345 3.8e-15 87.0 436 30.5
MELO3C016090.2 Cucumis melo HOM05D006105 ORTHO05D006345 3.2e-14 84.0 420 31.0
Ca_04016_v3 Cicer arietinum L. HOM05D006105 ORTHO05D006345 1.6e-13 81.6 469 27.3
SalBow7G2198 Salvia bowleyana HOM05D006105 ORTHO05D006345 2.1e-13 81.3 257 34.6
SalBow7G3373 Salvia bowleyana HOM05D006105 ORTHO05D006345 2.7e-13 80.9 257 34.6
Peaxi162Scf00069g01930 Petunia axillaris HOM05D006105 ORTHO05D006345 6.0e-13 79.7 439 28.5
Oeu061338.1 Olea europaea HOM05D006105 ORTHO05D006345 1.8e-12 78.2 222 35.1
SGA_v2.0_scaffold34G13768 Striga asiatica HOM05D006105 ORTHO05D006345 1.8e-12 78.2 422 26.3
Solyc07g062685.2 Solanum lycopersicum HOM05D006105 ORTHO05D006345 5.1e-12 76.6 278 32.7
Solyc12g014120.3 Solanum lycopersicum HOM05D006105 ORTHO05D006345 5.1e-12 76.6 279 31.9
CANSAT35G1552 Cannabis sativa HOM05D006105 ORTHO05D006345 6.7e-12 76.3 453 29.1
Manes.16G035200 Manihot esculenta HOM05D013066 ORTHO05D006345 1.1e-11 75.5 444 25.7
HanXRQChr12g0372831 Helianthus annuus HOM05D006105 ORTHO05D006345 1.5e-11 75.1 322 29.5
Thecc.06G176400 Theobroma cacao HOM05D013066 ORTHO05D010890 1.5e-11 75.1 459 27.0
Sed0026435 Sechium edule HOM05D006105 ORTHO05D006345 3.3e-11 73.9 425 28.7
ATR0602G093 Amborella trichopoda HOM05D006105 ORTHO05D006345 4.3e-11 73.6 447 24.6
DCAR_024487 Daucus carota HOM05D006105 ORTHO05D006345 4.3e-11 73.6 243 32.5
Nitab4.5_0003077g0030 Nicotiana tabacum HOM05D006105 ORTHO05D006345 5.7e-11 73.2 454 28.6
Lsat_1_v5_gn_5_129201 Lactuca sativa HOM05D006105 ORTHO05D006345 9.6e-11 72.4 449 27.2
Sopen07g030920 Solanum pennellii HOM05D006105 ORTHO05D006345 1.3e-10 72.0 255 32.5
Migut.M00751 Erythranthe guttata HOM05D006105 ORTHO05D006345 1.6e-10 71.6 296 30.4
Potri.004G052900 Populus trichocarpa HOM05D058718 ORTHO05D010890 2.1e-10 71.2 429 24.5
PGR083G1480 Punica granatum HOM05D006105 ORTHO05D006345 1.8e-09 68.2 436 27.1
SalBow8G2605 Salvia bowleyana HOM05D006105 ORTHO05D006345 6.9e-09 66.2 319 27.9
SEGI_16969 Sequoiadendron giganteum HOM05D016559 ORTHO05D019650 5.0e-07 60.1 280 28.9
Glyma.06G232800 Glycine max HOM05D006105 ORTHO05D006345 6.5e-07 59.7 499 26.9
Lj6g0011843 Lotus japonicus HOM05D009670 ORTHO05D010890 1.1e-06 58.9 284 30.6


User provided reference genes

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