Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G02145 Aquilegia oxysepala HOM05D007398 ORTHO05D004912 1.7e-59 232.6 129 100.0
TAR629G1636 Trochodendron aralioides HOM05D007398 ORTHO05D004912 3.8e-24 115.2 139 54.0
TAR627G0987 Trochodendron aralioides HOM05D007398 ORTHO05D004912 1.1e-23 113.6 138 53.6
Hma1.2p1_0328F.1_g126925 Hydrangea macrophylla HOM05D007398 ORTHO05D004912 1.9e-23 112.8 134 50.7
Hma1.2p1_0328F.1_g126930 Hydrangea macrophylla HOM05D007398 ORTHO05D004912 1.9e-23 112.8 134 50.7
Dinv39711 Davidia involucrata HOM05D007398 ORTHO05D004912 4.7e-22 108.2 132 49.2
TAR626G0532 Trochodendron aralioides HOM05D007398 ORTHO05D004912 4.7e-22 108.2 139 51.8
CSS0017183 Camellia sinensis var. sinensis HOM05D007398 ORTHO05D004912 4.0e-21 105.1 136 50.7
Nn1g03511 Nelumbo nucifera HOM05D007398 ORTHO05D004912 4.0e-21 105.1 127 52.8
Actinidia30523 Actinidia chinensis HOM05D007398 ORTHO05D004912 2.9e-19 99.0 135 51.1
Lsat_1_v5_gn_7_92201 Lactuca sativa HOM05D007398 ORTHO05D004912 3.5e-17 92.0 145 46.2
Cfa014400 Carpinus fangiana HOM05D007398 ORTHO05D004912 8.6e-16 87.4 145 44.1
CiPaw.03G160000 Carya illinoinensis HOM05D007398 ORTHO05D004912 1.5e-15 86.7 145 44.1
Prupe.3G217200 Prunus persica HOM05D007398 ORTHO05D004912 1.9e-15 86.3 138 46.4
RcHm_v2.0_Chr2g0159281 Rosa chinensis HOM05D007398 ORTHO05D004912 5.6e-15 84.7 136 44.1
FAN14G0586 Fragaria x ananassa HOM05D007398 ORTHO05D004912 7.3e-15 84.3 137 44.5
PSO541G0095 Papaver somniferum HOM05D007398 ORTHO05D004912 1.2e-14 83.6 143 44.8
TWI75G1275 Tripterygium wilfordii HOM05D007398 ORTHO05D004912 1.2e-14 83.6 137 43.8
Haze_12865 Corylus avellana HOM05D007398 ORTHO05D004912 1.6e-14 83.2 146 42.5
FAN05G1963 Fragaria x ananassa HOM05D007398 ORTHO05D004912 1.6e-14 83.2 137 43.8
Atru.chr6.3184 Acer truncatum HOM05D007398 ORTHO05D004912 3.6e-14 82.0 135 42.2
FAN09G1954 Fragaria x ananassa HOM05D007398 ORTHO05D004912 4.7e-14 81.6 116 44.8
CANSAT64G0797 Cannabis sativa HOM05D007398 ORTHO05D004912 6.2e-14 81.3 137 42.3
FvH4_6g43180 Fragaria vesca HOM05D007398 ORTHO05D004912 6.2e-14 81.3 137 43.8
FAN10G4171 Fragaria x ananassa HOM05D007398 ORTHO05D004912 6.2e-14 81.3 137 43.8
Lsat_1_v5_gn_9_106500 Lactuca sativa HOM05D007398 ORTHO05D004912 1.4e-13 80.1 143 42.0
TWI18G0787 Tripterygium wilfordii HOM05D007398 ORTHO05D004912 1.4e-13 80.1 137 42.3
Atru.chr6.3183 Acer truncatum HOM05D007398 ORTHO05D004912 1.8e-13 79.7 135 42.2
QL08p033081 Quercus lobata HOM05D007398 ORTHO05D004912 1.8e-13 79.7 145 41.4
Rhsim06G0162600 Rhododendron simsii HOM05D007398 ORTHO05D004912 1.8e-13 79.7 140 42.1
Actinidia03605 Actinidia chinensis HOM05D007398 ORTHO05D004912 3.1e-13 79.0 117 47.9
FAN02G4350 Fragaria x ananassa HOM05D007398 ORTHO05D004912 4.0e-13 78.6 137 43.1
MD09G1108900 Malus domestica HOM05D007398 ORTHO05D004912 5.2e-13 78.2 123 43.9
Ca_01601_v3 Cicer arietinum L. HOM05D007398 ORTHO05D004912 8.9e-13 77.4 120 43.3
MD17G1096900 Malus domestica HOM05D007398 ORTHO05D004912 2.0e-12 76.3 138 42.0
Psat5g264000 Pisum sativum HOM05D007398 ORTHO05D004912 3.4e-12 75.5 134 40.3
arahy.Tifrunner.gnm1.ann1.TIC55L Arachis hypogaea HOM05D007398 ORTHO05D004912 5.8e-12 74.7 137 43.1
Ciclev10017196m.g Citrus clementina HOM05D007398 ORTHO05D004912 5.8e-12 74.7 138 42.0
Glyma.13G308800 Glycine max HOM05D007398 ORTHO05D004912 5.8e-12 74.7 121 44.6
TPR.G4189 Trifolium pratense HOM05D007398 ORTHO05D004912 5.8e-12 74.7 132 40.9
VMungo1080G0246 Vigna mungo HOM05D007398 ORTHO05D004912 7.5e-12 74.3 131 43.5
Phvul.005G115200 Phaseolus vulgaris HOM05D007398 ORTHO05D004912 9.8e-12 73.9 131 42.0
Lalb_Chr19g0135871 Lupinus albus HOM05D007398 ORTHO05D004912 2.9e-11 72.4 132 40.9
Medtr2g088320 Medicago truncatula HOM05D007398 ORTHO05D004912 2.9e-11 72.4 113 42.5
Gohir.A12G157600 Gossypium hirsutum HOM05D007398 ORTHO05D004912 4.9e-11 71.6 127 37.8
Glyma.12G193700 Glycine max HOM05D007398 ORTHO05D004912 6.4e-11 71.2 131 49.6
ECA236G3422 Erigeron canadensis HOM05D007398 ORTHO05D004912 1.1e-10 70.5 142 41.5
Duzib251G0280 Durio zibethinus HOM05D007398 ORTHO05D004912 1.4e-10 70.1 127 39.4
Manes.13G070200 Manihot esculenta HOM05D007398 ORTHO05D004912 1.9e-10 69.7 117 41.9
HanXRQChr16g0504931 Helianthus annuus HOM05D007398 ORTHO05D004912 3.2e-10 68.9 138 41.3
Gorai.008G173500 Gossypium raimondii HOM05D007398 ORTHO05D004912 5.4e-10 68.2 127 37.8
Gorai.012G184400 Gossypium raimondii HOM05D007398 ORTHO05D004912 1.2e-09 67.0 107 40.2
Gohir.A04G144600 Gossypium hirsutum HOM05D007398 ORTHO05D004912 1.6e-09 66.6 107 40.2
Thecc.02G314700 Theobroma cacao HOM05D007398 ORTHO05D004912 2.7e-09 65.9 127 38.6
arahy.Tifrunner.gnm1.ann1.X0QM4L Arachis hypogaea HOM05D007398 ORTHO05D004912 3.5e-09 65.5 137 40.9
Manes.15G071300 Manihot esculenta HOM05D007398 ORTHO05D004912 4.6e-09 65.1 137 40.1
ClCG00G003290 Citrullus lanatus HOM05D007398 ORTHO05D004912 6.0e-09 64.7 125 41.6
ClCG02G001930 Citrullus lanatus HOM05D007398 ORTHO05D004912 6.0e-09 64.7 125 41.6
Duzib248G0799 Durio zibethinus HOM05D007398 ORTHO05D004912 6.0e-09 64.7 125 38.4
Gohir.D12G159800 Gossypium hirsutum HOM05D007398 ORTHO05D004912 6.0e-09 64.7 127 37.0
QL07p015665 Quercus lobata HOM05D007398 ORTHO05D004912 6.0e-09 64.7 132 38.6
RcHm_v2.0_Chr5g0002951 Rosa chinensis HOM05D011727 ORTHO05D004912 1.0e-08 63.9 92 44.6
Gohir.D04G189100 Gossypium hirsutum HOM05D007398 ORTHO05D004912 1.3e-08 63.5 107 39.3
ATR0794G061 Amborella trichopoda HOM05D007398 ORTHO05D004912 3.0e-08 62.4 142 35.2
MELO3C018817.2 Cucumis melo HOM05D007398 ORTHO05D004912 3.0e-08 62.4 125 40.0
Oeu041920.1 Olea europaea HOM05D007398 ORTHO05D004912 3.0e-08 62.4 141 37.6
Migut.M01320 Erythranthe guttata HOM05D011575 ORTHO05D004912 3.9e-08 62.0 92 44.6
MBI02_g21879_MAGBIO Magnolia biondii HOM05D007398 ORTHO05D004912 3.9e-08 62.0 107 43.0
Eucgr.K00797 Eucalyptus grandis HOM05D007398 ORTHO05D004912 5.0e-08 61.6 136 45.6
HanXRQChr03g0069481 Helianthus annuus HOM05D007398 ORTHO05D004912 6.6e-08 61.2 127 42.5
Haze_06802 Corylus avellana HOM05D061810 ORTHO05D004912 8.6e-08 60.8 93 41.9
Cc05_g04620 Coffea canephora HOM05D007398 ORTHO05D004912 1.1e-07 60.5 137 38.0
COL.COLO4_27711 Corchorus olitorius HOM05D007398 ORTHO05D004912 1.1e-07 60.5 130 37.7
Migut.H01572 Erythranthe guttata HOM05D011575 ORTHO05D004912 1.1e-07 60.5 85 45.9
Manes.03G130000 Manihot esculenta HOM05D007398 ORTHO05D004912 1.5e-07 60.1 124 37.9
Sed0017095 Sechium edule HOM05D007398 ORTHO05D004912 1.5e-07 60.1 125 43.2
CsaV3_7G003580 Cucumis sativus L. HOM05D007398 ORTHO05D004912 1.9e-07 59.7 125 39.2
Lalb_Chr24g0393181 Lupinus albus HOM05D007398 ORTHO05D004912 5.6e-07 58.2 108 40.7
Sed0010410 Sechium edule HOM05D007398 ORTHO05D004912 1.6e-06 56.6 128 40.6
PGSC0003DMG400016452 Solanum tuberosum HOM05D011575 ORTHO05D004912 1.6e-06 56.6 115 37.4
Zm00001eb431260 Zea mays HOM05D007398 ORTHO05D004912 3.6e-06 55.5 114 37.7
ClCG02G008700 Citrullus lanatus HOM05D007398 ORTHO05D004912 4.7e-06 55.1 130 37.7
Phvul.008G166200 Phaseolus vulgaris HOM05D011727 ORTHO05D004912 4.7e-06 55.1 96 40.6
QL05p073125 Quercus lobata HOM05D007398 ORTHO05D004912 4.7e-06 55.1 102 42.2
SGA_v2.0_scaffold7G03838 Striga asiatica HOM05D011575 ORTHO05D004912 4.7e-06 55.1 90 41.1
VMungo0647G2151 Vigna mungo HOM05D011727 ORTHO05D004912 6.2e-06 54.7 96 38.5
ECA240G1365 Erigeron canadensis HOM05D007398 ORTHO05D004912 8.1e-06 54.3 101 43.6


User provided reference genes

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