Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G02133 Aquilegia oxysepala HOM05D000001 ORTHO05D000501 1.3e-87 326.2 153 100.0
Aqoxy7G03524 Aquilegia oxysepala HOM05D003294 ORTHO05D004060 5.2e-20 101.7 120 45.8
Aa31LG2G7350 Aethionema arabicum HOM05D000001 ORTHO05D000501 1.2e-08 63.9 86 44.2
ClCG09G018200 Citrullus lanatus HOM05D000001 ORTHO05D000501 2.1e-08 63.2 141 32.6
COL.COLO4_22960 Corchorus olitorius HOM05D000001 ORTHO05D000501 3.5e-08 62.4 89 41.6
Thecc.02G345200 Theobroma cacao HOM05D000001 ORTHO05D000501 3.5e-08 62.4 109 38.5
Gorai.008G180800 Gossypium raimondii HOM05D000001 ORTHO05D000501 4.6e-08 62.0 89 41.6
CsaV3_5G038060 Cucumis sativus L. HOM05D000001 ORTHO05D000501 6.0e-08 61.6 140 30.0
HanXRQChr08g0210941 Helianthus annuus HOM05D000001 ORTHO05D000501 6.0e-08 61.6 86 39.5
Potri.008G086700 Populus trichocarpa HOM05D000001 ORTHO05D000501 7.8e-08 61.2 83 42.2
Atru.chr5.2392 Acer truncatum HOM05D000001 ORTHO05D000501 1.3e-07 60.5 98 36.7
Hma1.2p1_0795F.1_g218870 Hydrangea macrophylla HOM05D000001 ORTHO05D000501 1.3e-07 60.5 83 43.4
Gohir.A12G164800 Gossypium hirsutum HOM05D000001 ORTHO05D000501 1.7e-07 60.1 89 40.4
THA.LOC104805163 Tarenaya hassleriana HOM05D000001 ORTHO05D000501 1.7e-07 60.1 89 40.4
MSTRG.702 Avicennia marina HOM05D000001 ORTHO05D000501 2.3e-07 59.7 84 38.1
Carub.0005s0189 Capsella rubella HOM05D000001 ORTHO05D000501 2.3e-07 59.7 86 40.7
Manes.04G084851 Manihot esculenta HOM05D000001 ORTHO05D000501 2.3e-07 59.7 114 33.3
AL5G12610 Arabidopsis lyrata HOM05D000001 ORTHO05D000501 3.0e-07 59.3 86 40.7
Lalb_Chr21g0318791 Lupinus albus HOM05D000001 ORTHO05D000501 3.0e-07 59.3 96 38.5
Manes.05G102500 Manihot esculenta HOM05D000001 ORTHO05D000501 3.0e-07 59.3 86 39.5
AT2G02990 Arabidopsis thaliana HOM05D000001 ORTHO05D000501 3.9e-07 58.9 86 40.7
CARHR145410 Cardamine hirsuta HOM05D000001 ORTHO05D000501 3.9e-07 58.9 86 39.5
Duzib114G0102 Durio zibethinus HOM05D000001 ORTHO05D000501 3.9e-07 58.9 112 32.1
Thhalv10004863m.g Eutrema salsugineum HOM05D000001 ORTHO05D000501 5.1e-07 58.5 86 39.5
Medtr5g040960 Medicago truncatula HOM05D000001 ORTHO05D000501 5.1e-07 58.5 84 41.7
Actinidia04106 Actinidia chinensis HOM05D000001 ORTHO05D000501 6.6e-07 58.2 83 42.2
Sp2g14030 Schrenkiella parvula HOM05D000001 ORTHO05D000501 6.6e-07 58.2 86 39.5
Lsat_1_v5_gn_8_52600 Lactuca sativa HOM05D000001 ORTHO05D000501 8.6e-07 57.8 93 35.5
A06p43340 Brassica napus HOM05D000001 ORTHO05D000501 1.1e-06 57.4 86 38.4
BraA06t27220Z Brassica rapa HOM05D000001 ORTHO05D000501 1.1e-06 57.4 86 38.4
TWI79G0341 Tripterygium wilfordii HOM05D000001 ORTHO05D000501 1.1e-06 57.4 83 39.8
BcaC06g31207 Brassica carinata HOM05D000001 ORTHO05D000501 1.5e-06 57.0 86 38.4
Aqoxy3G03393 Aquilegia oxysepala HOM05D000001 ORTHO05D000501 1.9e-06 56.6 83 41.0
BcaB07g30314 Brassica carinata HOM05D000001 ORTHO05D000501 1.9e-06 56.6 86 38.4
A02p33210 Brassica napus HOM05D000001 ORTHO05D000501 1.9e-06 56.6 86 36.0
C02p51020 Brassica napus HOM05D000001 ORTHO05D000501 1.9e-06 56.6 86 36.0
C07p33610 Brassica napus HOM05D000001 ORTHO05D000501 1.9e-06 56.6 86 38.4
BolC2t11195H Brassica oleracea HOM05D000001 ORTHO05D000501 1.9e-06 56.6 86 36.0
BraA02t08345Z Brassica rapa HOM05D000001 ORTHO05D000501 1.9e-06 56.6 86 36.0
vmacro21102 Vaccinium macrocarpon HOM05D000001 ORTHO05D000501 1.9e-06 56.6 86 40.7
BcaC03g17180 Brassica carinata HOM05D000001 ORTHO05D000501 2.5e-06 56.2 86 36.0
CSS0018995 Camellia sinensis var. sinensis HOM05D000001 ORTHO05D000501 2.5e-06 56.2 83 39.8
Glyma.01G048200 Glycine max HOM05D000001 ORTHO05D000501 2.5e-06 56.2 82 40.2
Lsat_1_v5_gn_8_52560 Lactuca sativa HOM05D000001 ORTHO05D000501 2.5e-06 56.2 83 36.1
Prupe.1G275300 Prunus persica HOM05D000001 ORTHO05D000501 2.5e-06 56.2 90 41.1
BcaC06g34026 Brassica carinata HOM05D000001 ORTHO05D000501 3.3e-06 55.8 86 37.2
BolC7t43871H Brassica oleracea HOM05D000001 ORTHO05D000501 3.3e-06 55.8 84 35.7
MD13G1071600 Malus domestica HOM05D000001 ORTHO05D000501 3.3e-06 55.8 90 38.9
ClCG05G024250 Citrullus lanatus HOM05D000001 ORTHO05D000501 4.3e-06 55.5 83 36.1
DCAR_007156 Daucus carota HOM05D000001 ORTHO05D000501 4.3e-06 55.5 87 39.1
Gorai.013G086100 Gossypium raimondii HOM05D000001 ORTHO05D000501 4.3e-06 55.5 89 37.1
unitig_26.g10301 Utricularia gibba HOM05D000001 ORTHO05D000501 4.3e-06 55.5 84 36.9
VMungo1215G1461 Vigna mungo HOM05D000001 ORTHO05D000501 4.3e-06 55.5 83 38.6
Medtr0002s1200 Medicago truncatula HOM05D000001 ORTHO05D000501 5.6e-06 55.1 108 37.0
Medtr2g021910 Medicago truncatula HOM05D000001 ORTHO05D000501 5.6e-06 55.1 133 33.1
Peaxi162Scf00803g00534 Petunia axillaris HOM05D000001 ORTHO05D011474 5.6e-06 55.1 85 36.5
Rhsim01G0145400 Rhododendron simsii HOM05D000001 ORTHO05D000501 5.6e-06 55.1 86 39.5
Actinidia25576 Actinidia chinensis HOM05D000001 ORTHO05D000501 7.3e-06 54.7 141 27.7
Ca_04803_v3 Cicer arietinum L. HOM05D000001 ORTHO05D000501 7.3e-06 54.7 80 41.2
Ca_04805_v3 Cicer arietinum L. HOM05D000001 ORTHO05D000501 7.3e-06 54.7 80 41.2
HanXRQChr08g0210951 Helianthus annuus HOM05D000001 ORTHO05D000501 7.3e-06 54.7 83 37.3
CsaV3_3G036400 Cucumis sativus L. HOM05D000001 ORTHO05D000039 9.6e-06 54.3 113 30.1
Gohir.D13G075400 Gossypium hirsutum HOM05D000001 ORTHO05D000501 9.6e-06 54.3 88 37.5
vmacro04522 Vaccinium macrocarpon HOM05D000001 ORTHO05D000501 9.6e-06 54.3 95 38.9
HPP92_004330 Vanilla planifolia HOM05D000001 ORTHO05D000501 9.6e-06 54.3 113 36.3


User provided reference genes

Program Settings