Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G01934 Aquilegia oxysepala HOM05D007438 ORTHO05D009395 2.2e-157 558.9 277 100.0
TAR629G3405 Trochodendron aralioides HOM05D007438 ORTHO05D009395 7.1e-68 261.5 283 54.1
MBI06_g16570_MAGBIO Magnolia biondii HOM05D007438 ORTHO05D009395 1.1e-63 247.7 284 50.7
Nn3g21054 Nelumbo nucifera HOM05D007438 ORTHO05D009395 7.6e-62 241.5 263 49.8
COL.COLO4_33655 Corchorus olitorius HOM05D007438 ORTHO05D009395 9.3e-60 234.6 256 49.6
GSVIVG01020783001 Vitis vinifera HOM05D007438 ORTHO05D009395 1.2e-59 234.2 287 48.4
Duzib264G0748 Durio zibethinus HOM05D007438 ORTHO05D009395 6.1e-59 231.9 283 47.7
Thecc.01G156400 Theobroma cacao HOM05D007438 ORTHO05D009395 1.5e-57 227.3 282 45.4
CSS0044063 Camellia sinensis var. sinensis HOM05D007438 ORTHO05D009395 2.5e-52 209.9 288 45.1
QL08p043052 Quercus lobata HOM05D007438 ORTHO05D009395 1.2e-51 207.6 318 40.9
CSS0040852 Camellia sinensis var. sinensis HOM05D007438 ORTHO05D009395 2.7e-51 206.5 288 44.4
Actinidia30518 Actinidia chinensis HOM05D007438 ORTHO05D009395 1.0e-50 204.5 292 45.2
vmacro09194 Vaccinium macrocarpon HOM05D007438 ORTHO05D009395 3.0e-50 203.0 285 45.3
Cfa021395 Carpinus fangiana HOM05D007438 ORTHO05D009395 6.7e-50 201.8 326 39.6
PGR042G1218 Punica granatum HOM05D007438 ORTHO05D009395 8.8e-50 201.4 287 42.5
Potri.014G141500 Populus trichocarpa HOM05D007438 ORTHO05D009395 2.6e-49 199.9 290 43.4
Sabra14G0106800 Salix brachista HOM05D007438 ORTHO05D009395 5.7e-49 198.7 266 47.0
Gorai.006G004700 Gossypium raimondii HOM05D007438 ORTHO05D009395 7.4e-49 198.4 284 43.0
MSTRG.6772 Avicennia marina HOM05D007438 ORTHO05D009395 2.8e-48 196.4 290 42.1
Glyma.02G288700 Glycine max HOM05D007438 ORTHO05D009395 4.8e-48 195.7 283 41.0
Gohir.D09G003400 Gossypium hirsutum HOM05D007438 ORTHO05D009395 6.3e-48 195.3 284 42.6
Medtr5g091960 Medicago truncatula HOM05D007438 ORTHO05D009395 2.4e-47 193.4 283 42.4
Cc05_g09010 Coffea canephora HOM05D007438 ORTHO05D009395 4.1e-47 192.6 277 44.4
Gohir.A09G003800 Gossypium hirsutum HOM05D007438 ORTHO05D009395 6.9e-47 191.8 284 42.6
Glyma.14G026100 Glycine max HOM05D007438 ORTHO05D009395 9.1e-47 191.4 283 41.3
Rhsim04G0081300 Rhododendron simsii HOM05D007438 ORTHO05D009395 9.1e-47 191.4 290 44.5
TAR626G1821 Trochodendron aralioides HOM05D007438 ORTHO05D009395 2.0e-46 190.3 202 54.5
Ciclev10016256m.g Citrus clementina HOM05D007438 ORTHO05D009395 2.6e-46 189.9 291 43.6
CiPaw.03G193300 Carya illinoinensis HOM05D007438 ORTHO05D009395 3.4e-46 189.5 313 40.9
CAN.G803.12 Capsicum annuum HOM05D007438 ORTHO05D009395 2.2e-45 186.8 281 42.0
Cpa.g.sc50.57 Carica papaya HOM05D007438 ORTHO05D009395 3.8e-45 186.0 292 40.1
CSS0035465 Camellia sinensis var. sinensis HOM05D007438 ORTHO05D009395 6.5e-45 185.3 291 41.9
DCAR_013288 Daucus carota HOM05D007438 ORTHO05D009395 1.9e-44 183.7 260 42.3
Eucgr.A01949 Eucalyptus grandis HOM05D007438 ORTHO05D009395 1.9e-44 183.7 287 41.8
arahy.Tifrunner.gnm1.ann1.2XI8FI Arachis hypogaea HOM05D007438 ORTHO05D009395 4.2e-44 182.6 297 39.1
arahy.Tifrunner.gnm1.ann1.9R49YU Arachis hypogaea HOM05D007438 ORTHO05D009395 4.2e-44 182.6 297 39.1
Sopen07g029090 Solanum pennellii HOM05D007438 ORTHO05D009395 1.2e-43 181.0 279 41.6
Manes.01G129800 Manihot esculenta HOM05D007438 ORTHO05D009395 1.6e-43 180.6 261 43.7
PGSC0003DMG401017288 Solanum tuberosum HOM05D007438 ORTHO05D009395 4.7e-43 179.1 285 41.1
Peaxi162Scf00154g01024 Petunia axillaris HOM05D007438 ORTHO05D009395 1.0e-42 177.9 254 44.5
Solyc07g055720.4 Solanum lycopersicum HOM05D007438 ORTHO05D009395 1.0e-42 177.9 282 41.8
Nitab4.5_0003133g0060 Nicotiana tabacum HOM05D007438 ORTHO05D009395 1.4e-42 177.6 280 39.6
TPR.G12671 Trifolium pratense HOM05D007438 ORTHO05D009395 2.3e-42 176.8 284 39.4
ClCG09G022220 Citrullus lanatus HOM05D007438 ORTHO05D009395 3.9e-42 176.0 288 39.6
MELO3C014451.2 Cucumis melo HOM05D007438 ORTHO05D009395 1.1e-41 174.5 288 39.6
VMungo1215G1664 Vigna mungo HOM05D007438 ORTHO05D009395 1.1e-41 174.5 269 41.3
TWI74G0447 Tripterygium wilfordii HOM05D007438 ORTHO05D009395 1.5e-41 174.1 264 40.5
CsaV3_6G037900 Cucumis sativus L. HOM05D007438 ORTHO05D009395 4.4e-41 172.6 285 40.0
Dinv11426 Davidia involucrata HOM05D007438 ORTHO05D009395 4.4e-41 172.6 263 41.4
AUR62031789 Chenopodium quinoa HOM05D007438 ORTHO05D009395 1.7e-40 170.6 296 40.2
Ca_06297_v3 Cicer arietinum L. HOM05D007438 ORTHO05D009395 4.8e-40 169.1 283 37.5
EL10Ac9g21031 Beta vulgaris HOM05D007438 ORTHO05D009395 1.4e-39 167.5 290 40.3
CANSAT64G1631 Cannabis sativa HOM05D007438 ORTHO05D009395 3.1e-39 166.4 322 37.6
Sed0004780 Sechium edule HOM05D007438 ORTHO05D009395 3.1e-39 166.4 285 38.6
Lalb_Chr10g0106871 Lupinus albus HOM05D007438 ORTHO05D009395 4.1e-39 166.0 285 38.2
Atru.chr6.3569 Acer truncatum HOM05D007438 ORTHO05D009395 5.3e-39 165.6 301 37.2
Migut.M00210 Erythranthe guttata HOM05D007438 ORTHO05D009395 5.3e-39 165.6 279 38.7
Lj3C1012T3 Lonicera japonica HOM05D007438 ORTHO05D009395 1.6e-38 164.1 271 41.0
LjContig00310g0012276 Lotus japonicus HOM05D007438 ORTHO05D009395 2.0e-38 163.7 284 38.4
SalBow7G1752 Salvia bowleyana HOM05D007438 ORTHO05D009395 4.5e-38 162.5 287 37.3
Hund07732 Selenicereus undatus HOM05D007438 ORTHO05D009395 4.5e-38 162.5 301 38.2
AUR62023994 Chenopodium quinoa HOM05D007438 ORTHO05D009395 5.9e-38 162.2 271 40.6
ECA234G1517 Erigeron canadensis HOM05D007438 ORTHO05D009395 1.5e-36 157.5 290 39.0
ATR0127G021 Amborella trichopoda HOM05D007438 ORTHO05D009395 1.9e-36 157.1 222 45.0
arahy.Tifrunner.gnm1.ann1.K6S8U8 Arachis hypogaea HOM05D007438 ORTHO05D009395 2.7e-35 153.3 289 37.4
Phvul.008G264700 Phaseolus vulgaris HOM05D007438 ORTHO05D009395 3.6e-35 152.9 283 34.6
CARHR006070 Cardamine hirsuta HOM05D007438 ORTHO05D009395 5.2e-34 149.1 298 34.6
Carub.0001s0582 Capsella rubella HOM05D007438 ORTHO05D009395 6.7e-34 148.7 325 34.5
Lsat_1_v5_gn_4_26780 Lactuca sativa HOM05D007438 ORTHO05D009395 2.6e-33 146.7 287 34.5
HanXRQChr01g0028661 Helianthus annuus HOM05D007438 ORTHO05D009395 5.7e-33 145.6 290 35.9
SEGI_11984 Sequoiadendron giganteum HOM05D007438 ORTHO05D009395 7.5e-33 145.2 289 33.2
THA.LOC104800831 Tarenaya hassleriana HOM05D007438 ORTHO05D009395 2.2e-32 143.7 274 35.4
AL1G16470 Arabidopsis lyrata HOM05D007438 ORTHO05D009395 3.7e-32 142.9 297 34.3
Sp1g05220 Schrenkiella parvula HOM05D007438 ORTHO05D009395 2.4e-31 140.2 327 32.7
AT1G06460 Arabidopsis thaliana HOM05D007438 ORTHO05D009395 3.1e-31 139.8 316 32.3
A10p05120 Brassica napus HOM05D007438 ORTHO05D009395 3.1e-31 139.8 311 31.8
C05p04710 Brassica napus HOM05D007438 ORTHO05D009395 5.3e-31 139.0 309 32.0
Psat2g015640 Pisum sativum HOM05D007438 ORTHO05D009395 1.2e-30 137.9 287 36.9
BraA10t42777Z Brassica rapa HOM05D007438 ORTHO05D009395 5.9e-30 135.6 320 30.6
Prupe.3G108500 Prunus persica HOM05D007438 ORTHO05D009395 7.7e-30 135.2 233 38.6
BolC5t29243H Brassica oleracea HOM05D007438 ORTHO05D009395 8.5e-29 131.7 320 30.3
BraA08t35504Z Brassica rapa HOM05D007438 ORTHO05D009395 2.5e-28 130.2 285 32.3
Aa31LG1G7510 Aethionema arabicum HOM05D007438 ORTHO05D009395 3.2e-28 129.8 320 31.9
HPP92_021771 Vanilla planifolia HOM05D007438 ORTHO05D009395 1.6e-27 127.5 285 35.1
Nitab4.5_0005259g0040 Nicotiana tabacum HOM05D007438 ORTHO05D009395 2.1e-27 127.1 225 37.3
BolC8t47053H Brassica oleracea HOM05D007438 ORTHO05D009395 3.6e-27 126.3 271 34.3
BcaB02g06796 Brassica carinata HOM05D007438 ORTHO05D009395 8.0e-27 125.2 313 31.0
A08p35960 Brassica napus HOM05D007438 ORTHO05D009395 3.0e-26 123.2 244 32.8
C08p02600 Brassica napus HOM05D007438 ORTHO05D009395 2.0e-25 120.6 276 34.1
Nitab4.5_0011473g0010 Nicotiana tabacum HOM05D007438 ORTHO05D009395 2.7e-22 110.2 221 32.6
arahy.Tifrunner.gnm1.ann1.AN6F3M Arachis hypogaea HOM05D007438 ORTHO05D009395 1.3e-21 107.8 228 34.2
BcaB03g13417 Brassica carinata HOM05D000181 ORTHO05D002783 5.0e-21 105.9 270 32.2
Thhalv10008353m.g Eutrema salsugineum HOM05D007438 ORTHO05D009395 1.9e-20 104.0 259 33.6
Sc21g0004330 Simmondsia chinensis HOM05D007438 ORTHO05D009395 1.2e-19 101.3 117 45.3
Sc21g0004320 Simmondsia chinensis HOM05D007438 ORTHO05D009395 1.8e-18 97.4 157 41.4
SMO111G0151 Selaginella moellendorffii HOM05D007438 ORTHO05D009395 3.0e-18 96.7 289 28.4
Phvul.003G195300 Phaseolus vulgaris HOM05D007438 ORTHO05D009395 6.8e-18 95.5 154 38.3
Mapoly0109s0048 Marchantia polymorpha HOM05D007438 ORTHO05D009395 2.0e-14 84.0 119 40.3
BcaC07g36810 Brassica carinata HOM05D000181 ORTHO05D002783 2.7e-14 83.6 200 32.5
Haze_13451 Corylus avellana HOM05D007438 ORTHO05D009395 1.0e-13 81.6 133 42.9
HanXRQChr17g0565881 Helianthus annuus HOM05D007438 ORTHO05D009395 6.6e-13 79.0 141 39.7
SalBow8G2019 Salvia bowleyana HOM05D007438 ORTHO05D009395 7.3e-12 75.5 113 42.5
arahy.Tifrunner.gnm1.ann1.28WURV Arachis hypogaea HOM05D007438 ORTHO05D009395 1.2e-11 74.7 104 38.5
Pp3c2_23860 Physcomitrium patens HOM05D007438 ORTHO05D009395 2.3e-10 70.5 228 29.4


User provided reference genes

Program Settings