Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G01780 Aquilegia oxysepala HOM05D007472 ORTHO05D009477 1.6e-109 399.4 204 100.0
Aqoxy1G01920 Aquilegia oxysepala HOM05D007472 ORTHO05D009477 3.0e-47 192.6 166 62.0
TAR622G0243 Trochodendron aralioides HOM05D007472 ORTHO05D009477 1.7e-26 123.6 185 43.8
MBI14_g12118_MAGBIO Magnolia biondii HOM05D007472 ORTHO05D009477 5.0e-26 122.1 178 42.7
Cfa007540 Carpinus fangiana HOM05D007472 ORTHO05D009477 7.0e-20 101.7 139 41.0
TWI60G0556 Tripterygium wilfordii HOM05D007472 ORTHO05D009477 2.6e-19 99.8 139 39.6
RcHm_v2.0_Chr6g0246231 Rosa chinensis HOM05D007472 ORTHO05D009477 3.5e-19 99.4 149 38.3
Haze_14546 Corylus avellana HOM05D007472 ORTHO05D009477 5.9e-19 98.6 139 40.3
Prupe.3G268600 Prunus persica HOM05D007472 ORTHO05D009477 1.7e-18 97.1 170 32.9
Manes.01G090001 Manihot esculenta HOM05D007472 ORTHO05D009477 2.2e-18 96.7 191 34.0
RcHm_v2.0_Chr2g0168671 Rosa chinensis HOM05D007472 ORTHO05D009477 6.5e-18 95.1 121 42.1
FvH4_6g49850 Fragaria vesca HOM05D007472 ORTHO05D009477 8.5e-18 94.7 139 38.8
QL04p014554 Quercus lobata HOM05D007472 ORTHO05D009477 8.5e-18 94.7 140 39.3
QL04p014916 Quercus lobata HOM05D007472 ORTHO05D009477 8.5e-18 94.7 140 39.3
SEGI_07251 Sequoiadendron giganteum HOM05D007472 ORTHO05D009477 8.5e-18 94.7 149 38.3
MD09G1050300 Malus domestica HOM05D007472 ORTHO05D009477 1.1e-17 94.4 170 32.4
PGR142G1798 Punica granatum HOM05D007472 ORTHO05D009477 2.5e-17 93.2 141 38.3
Zm00001eb029370 Zea mays HOM05D007472 ORTHO05D009477 2.1e-16 90.1 99 45.5
FAN05G4432 Fragaria x ananassa HOM05D007472 ORTHO05D009477 2.7e-16 89.7 121 38.8
FvH4_6g48800 Fragaria vesca HOM05D007472 ORTHO05D009477 8.0e-16 88.2 170 31.8
FAN02G3469 Fragaria x ananassa HOM05D007472 ORTHO05D009477 8.0e-16 88.2 140 35.7
FAN14G2920 Fragaria x ananassa HOM05D007472 ORTHO05D009477 1.0e-15 87.8 139 36.0
SHI06832 Sapria himalayana HOM05D007472 ORTHO05D000001 3.0e-15 86.3 134 35.1
ATR0037G017 Amborella trichopoda HOM05D007472 ORTHO05D009477 4.0e-15 85.9 173 35.8
FAN09G3065 Fragaria x ananassa HOM05D007472 ORTHO05D009477 4.0e-15 85.9 140 35.0
Aa31LG2G4320 Aethionema arabicum HOM05D007472 ORTHO05D009477 7.5e-14 81.6 136 35.3
Gohir.D07G211400 Gossypium hirsutum HOM05D007472 ORTHO05D009477 9.7e-14 81.3 156 35.9
Gorai.001G238800 Gossypium raimondii HOM05D007472 ORTHO05D009477 9.7e-14 81.3 156 35.9
Potri.004G129100 Populus trichocarpa HOM05D007472 ORTHO05D009477 9.7e-14 81.3 137 34.3
Thecc.04G080300 Theobroma cacao HOM05D007472 ORTHO05D009477 9.7e-14 81.3 155 36.1
Gohir.A07G205200 Gossypium hirsutum HOM05D007472 ORTHO05D009477 1.3e-13 80.9 156 35.3
Os12g0572800 Oryza sativa ssp. japonica HOM05D007472 ORTHO05D009477 1.7e-13 80.5 121 36.4
FvH4_1g02370 Fragaria vesca HOM05D007472 ORTHO05D009477 2.2e-13 80.1 139 35.3
Carub.0005s0743 Capsella rubella HOM05D007472 ORTHO05D009477 4.8e-13 79.0 139 32.4
CARHR151910 Cardamine hirsuta HOM05D007472 ORTHO05D009477 6.3e-13 78.6 135 35.6
AT3G28875 Arabidopsis thaliana HOM05D007472 ORTHO05D009477 1.4e-12 77.4 83 43.4
Thhalv10003677m.g Eutrema salsugineum HOM05D007472 ORTHO05D009477 2.4e-12 76.6 132 34.1
Thhalv10009510m.g Eutrema salsugineum HOM05D007472 ORTHO05D009477 2.4e-12 76.6 139 33.8
AL5G18670 Arabidopsis lyrata HOM05D007472 ORTHO05D009477 7.0e-12 75.1 139 30.9
C02p55120 Brassica napus HOM05D007472 ORTHO05D009477 9.1e-12 74.7 160 31.9
BcaC03g17537 Brassica carinata HOM05D007472 ORTHO05D009477 2.0e-11 73.6 134 32.8
A02p36140 Brassica napus HOM05D007472 ORTHO05D009477 2.0e-11 73.6 146 32.9
BolC2t11563H Brassica oleracea HOM05D007472 ORTHO05D009477 2.0e-11 73.6 134 32.8
BraA02t08613Z Brassica rapa HOM05D007472 ORTHO05D009477 2.0e-11 73.6 146 32.9
EL10Ac2g02974 Beta vulgaris HOM05D007472 ORTHO05D009477 4.5e-11 72.4 132 36.4
AUR62039817 Chenopodium quinoa HOM05D007472 ORTHO05D009477 1.0e-10 71.2 146 34.2
Sp2g17510 Schrenkiella parvula HOM05D007472 ORTHO05D009477 1.0e-10 71.2 132 31.1
THA.LOC104805462 Tarenaya hassleriana HOM05D007472 ORTHO05D009477 1.0e-10 71.2 131 33.6
BcaB07g30111 Brassica carinata HOM05D007472 ORTHO05D009477 2.2e-10 70.1 135 33.3
AUR62034397 Chenopodium quinoa HOM05D007472 ORTHO05D009477 4.2e-09 65.9 118 34.7
Ciclev10011009m.g Citrus clementina HOM05D007472 ORTHO05D009477 2.7e-08 63.2 46 65.2
Mapoly0003s0158 Marchantia polymorpha HOM05D007472 ORTHO05D009477 5.2e-07 58.9 87 37.9
Duzib147G0661 Durio zibethinus HOM05D007472 ORTHO05D009477 4.4e-06 55.8 56 53.6


User provided reference genes

Program Settings