Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G01627 Aquilegia oxysepala HOM05D006946 ORTHO05D008634 5.0e-199 697.6 355 100.0
Aqoxy5G04137 Aquilegia oxysepala HOM05D006946 ORTHO05D008634 8.8e-196 686.8 353 98.9
GSVIVG01018284001 Vitis vinifera HOM05D006946 ORTHO05D008634 7.7e-107 391.3 351 59.0
TAR629G0179 Trochodendron aralioides HOM05D006946 ORTHO05D008634 2.4e-100 369.8 357 56.3
PSO717G0092 Papaver somniferum HOM05D006946 ORTHO05D008634 4.5e-99 365.5 353 55.8
Atru.chr5.122 Acer truncatum HOM05D006946 ORTHO05D008634 5.9e-99 365.2 355 56.9
Thecc.01G395400 Theobroma cacao HOM05D006946 ORTHO05D008634 1.0e-98 364.4 351 56.1
Rhsim07G0036200 Rhododendron simsii HOM05D006946 ORTHO05D008634 1.3e-98 364.0 352 56.2
CSS0010598 Camellia sinensis var. sinensis HOM05D006946 ORTHO05D008634 6.5e-98 361.7 350 58.6
PSO675G1257 Papaver somniferum HOM05D006946 ORTHO05D008634 8.5e-98 361.3 352 54.5
QL04p030124 Quercus lobata HOM05D006946 ORTHO05D008634 1.9e-97 360.1 347 56.8
Duzib133G0968 Durio zibethinus HOM05D006946 ORTHO05D008634 2.5e-97 359.8 352 54.5
Haze_02851 Corylus avellana HOM05D006946 ORTHO05D008634 7.2e-97 358.2 356 54.2
Ciclev10020918m.g Citrus clementina HOM05D006946 ORTHO05D008634 9.4e-97 357.8 350 54.9
vmacro13499 Vaccinium macrocarpon HOM05D006946 ORTHO05D008634 1.6e-96 357.1 351 55.0
Actinidia32506 Actinidia chinensis HOM05D006946 ORTHO05D008634 1.0e-95 354.4 350 55.1
PGR042G0965 Punica granatum HOM05D006946 ORTHO05D008634 1.8e-95 353.6 360 51.4
Phvul.010G049700 Phaseolus vulgaris HOM05D006946 ORTHO05D008634 1.1e-94 350.9 362 54.4
COL.COLO4_12403 Corchorus olitorius HOM05D006946 ORTHO05D008634 5.7e-94 348.6 351 53.6
Cfa011066 Carpinus fangiana HOM05D006946 ORTHO05D008634 1.7e-93 347.1 355 54.4
VMungo0331G1797 Vigna mungo HOM05D006946 ORTHO05D008634 2.8e-93 346.3 365 51.8
Glyma.03G110700 Glycine max HOM05D006946 ORTHO05D008634 3.5e-91 339.3 364 51.9
Hma1.2p1_0072F.1_g038310 Hydrangea macrophylla HOM05D006946 ORTHO05D008634 7.7e-91 338.2 352 53.1
FAN10G0617 Fragaria x ananassa HOM05D006946 ORTHO05D008634 1.0e-90 337.8 351 53.0
FAN03G2893 Fragaria x ananassa HOM05D006946 ORTHO05D008634 1.1e-89 334.3 351 52.1
arahy.Tifrunner.gnm1.ann1.4A1F8H Arachis hypogaea HOM05D006946 ORTHO05D008634 1.5e-89 334.0 359 50.7
MSTRG.20688 Avicennia marina HOM05D006946 ORTHO05D008634 2.5e-89 333.2 349 51.0
FAN06G0853 Fragaria x ananassa HOM05D006946 ORTHO05D008634 2.5e-89 333.2 351 52.1
FAN10G1802 Fragaria x ananassa HOM05D006946 ORTHO05D008634 3.2e-89 332.8 351 52.4
arahy.Tifrunner.gnm1.ann1.GB8G30 Arachis hypogaea HOM05D006946 ORTHO05D008634 9.4e-89 331.3 359 49.9
FvH4_7g10220 Fragaria vesca HOM05D006946 ORTHO05D008634 9.4e-89 331.3 351 51.9
FAN06G0591 Fragaria x ananassa HOM05D006946 ORTHO05D008634 1.6e-88 330.5 351 52.1
HanXRQChr13g0423251 Helianthus annuus HOM05D006946 ORTHO05D008634 3.6e-88 329.3 337 52.8
Gorai.008G109100 Gossypium raimondii HOM05D006946 ORTHO05D008634 6.1e-88 328.6 352 54.5
Nn1g00836 Nelumbo nucifera HOM05D006946 ORTHO05D008634 6.1e-88 328.6 350 52.9
vmacro13524 Vaccinium macrocarpon HOM05D006946 ORTHO05D008634 1.1e-86 324.3 411 46.2
RcHm_v2.0_Chr1g0347961 Rosa chinensis HOM05D006946 ORTHO05D008634 2.6e-86 323.2 350 50.9
CANSAT25G1232 Cannabis sativa HOM05D006946 ORTHO05D008634 5.7e-86 322.0 357 49.6
Ca_25802_v3 Cicer arietinum L. HOM05D006946 ORTHO05D008634 1.7e-85 320.5 368 49.2
THA.LOC104817188 Tarenaya hassleriana HOM05D006946 ORTHO05D008634 1.7e-85 320.5 351 50.4
Gohir.D12G100200 Gossypium hirsutum HOM05D006946 ORTHO05D008634 2.2e-85 320.1 352 53.1
PGSC0003DMG400025996 Solanum tuberosum HOM05D006946 ORTHO05D008634 3.7e-85 319.3 358 50.3
Lj3g0014310 Lotus japonicus HOM05D006946 ORTHO05D008634 6.3e-85 318.5 343 51.6
Solyc01g090220.4 Solanum lycopersicum HOM05D006946 ORTHO05D008634 6.3e-85 318.5 332 53.0
CAN.G1473.5 Capsicum annuum HOM05D006946 ORTHO05D008634 1.1e-84 317.8 328 54.6
Sopen01g036020 Solanum pennellii HOM05D006946 ORTHO05D008634 1.1e-84 317.8 358 50.3
TPR.G33124 Trifolium pratense HOM05D006946 ORTHO05D008634 1.4e-84 317.4 368 48.6
Cc02_g25140 Coffea canephora HOM05D006946 ORTHO05D008634 1.8e-84 317.0 352 51.7
Potri.002G138000 Populus trichocarpa HOM05D006946 ORTHO05D008634 5.3e-84 315.5 355 50.7
ECA240G0199 Erigeron canadensis HOM05D006946 ORTHO05D008634 1.6e-83 313.9 341 52.2
Medtr8g006950 Medicago truncatula HOM05D006946 ORTHO05D008634 1.6e-83 313.9 361 49.9
TWI14G0580 Tripterygium wilfordii HOM05D006946 ORTHO05D008634 2.0e-83 313.5 332 52.7
Zm00001eb200010 Zea mays HOM05D006946 ORTHO05D008634 4.5e-83 312.4 362 49.7
Nitab4.5_0007027g0020 Nicotiana tabacum HOM05D006946 ORTHO05D008634 1.0e-82 311.2 348 50.3
Lsat_1_v5_gn_3_126900 Lactuca sativa HOM05D006946 ORTHO05D008634 5.0e-82 308.9 364 50.8
Migut.B01532 Erythranthe guttata HOM05D006946 ORTHO05D008634 6.5e-82 308.5 357 50.4
Sc02g0003120 Simmondsia chinensis HOM05D006946 ORTHO05D008634 8.5e-82 308.1 365 48.2
SalBow5G3575 Salvia bowleyana HOM05D006946 ORTHO05D008634 3.2e-81 306.2 369 49.1
Gohir.A12G097300 Gossypium hirsutum HOM05D006946 ORTHO05D008634 1.6e-80 303.9 250 61.6
Carub.0005s2704 Capsella rubella HOM05D006946 ORTHO05D008634 2.7e-80 303.1 280 54.3
CARHR170620 Cardamine hirsuta HOM05D006946 ORTHO05D008634 1.0e-79 301.2 281 55.5
Lalb_Chr07g0195411 Lupinus albus HOM05D006946 ORTHO05D008634 3.0e-79 299.7 368 48.6
SGA_v2.0_scaffold340G49324 Striga asiatica HOM05D006946 ORTHO05D008634 6.8e-79 298.5 374 47.6
Thhalv10006060m.g Eutrema salsugineum HOM05D006946 ORTHO05D008634 3.4e-78 296.2 289 54.3
HPP92_022105 Vanilla planifolia HOM05D006946 ORTHO05D008634 1.3e-77 294.3 351 46.4
Sp5g02920 Schrenkiella parvula HOM05D006946 ORTHO05D008634 2.8e-77 293.1 354 47.2
AT3G60300 Arabidopsis thaliana HOM05D006946 ORTHO05D008634 3.7e-77 292.7 286 54.2
ATR0057G021 Amborella trichopoda HOM05D006946 ORTHO05D008634 1.4e-76 290.8 349 48.1
Eucgr.E01546 Eucalyptus grandis HOM05D006946 ORTHO05D008634 1.8e-76 290.4 369 44.4
Psat4g224200 Pisum sativum HOM05D006946 ORTHO05D008634 3.5e-75 286.2 355 47.3
HPP92_022132 Vanilla planifolia HOM05D006946 ORTHO05D008634 7.7e-75 285.0 351 45.6
EL10Ac1g00757 Beta vulgaris HOM05D006946 ORTHO05D008634 1.2e-72 277.7 370 45.1
Aa31LG10G14420 Aethionema arabicum HOM05D006946 ORTHO05D008634 4.7e-72 275.8 359 44.8
Nitab4.5_0000920g0010 Nicotiana tabacum HOM05D006946 ORTHO05D008634 9.8e-70 268.1 365 46.0
Sabra02G0106500 Salix brachista HOM05D006946 ORTHO05D008634 2.8e-69 266.5 438 41.1
AL5G42520 Arabidopsis lyrata HOM05D006946 ORTHO05D008634 1.4e-68 264.2 280 51.8
CiPaw.14G020200 Carya illinoinensis HOM05D006946 ORTHO05D008634 1.4e-68 264.2 203 62.1
Ah.05g177890 Amaranthus hybridus HOM05D006946 ORTHO05D008634 1.8e-68 263.8 370 44.1
A04p01710 Brassica napus HOM05D006946 ORTHO05D008634 4.1e-68 262.7 278 51.4
AUR62023403 Chenopodium quinoa HOM05D006946 ORTHO05D008634 7.0e-68 261.9 342 44.4
C04p32350 Brassica napus HOM05D006946 ORTHO05D008634 2.3e-66 256.9 350 44.6
BraA04t15895Z Brassica rapa HOM05D006946 ORTHO05D008634 1.4e-63 247.7 297 48.1
BolC4t24784H Brassica oleracea HOM05D006946 ORTHO05D008634 5.2e-63 245.7 374 42.2
unitig_750.g28410 Utricularia gibba HOM05D006946 ORTHO05D008634 1.4e-60 237.7 362 44.5
Peaxi162Scf00475g00422 Petunia axillaris HOM05D000253 ORTHO05D000149 8.6e-58 228.4 425 39.1
Dinv43613 Davidia involucrata HOM05D006946 ORTHO05D008634 1.0e-55 221.5 241 53.1
Actinidia18349 Actinidia chinensis HOM05D006946 ORTHO05D008634 1.8e-55 220.7 254 50.8
AUR62013748 Chenopodium quinoa HOM05D006946 ORTHO05D008634 1.5e-54 217.6 371 39.6
Hund27407 Selenicereus undatus HOM05D006946 ORTHO05D008634 3.2e-52 209.9 566 30.9
Prupe.2G132200 Prunus persica HOM05D006946 ORTHO05D008634 9.2e-52 208.4 272 47.4
Manes.05G055200 Manihot esculenta HOM05D006946 ORTHO05D008634 6.0e-51 205.7 254 46.5
Mapoly0040s0025 Marchantia polymorpha HOM05D006946 ORTHO05D008634 3.9e-50 203.0 337 39.2
Lj9A556T13 Lonicera japonica HOM05D006946 ORTHO05D008634 2.0e-46 190.7 252 46.4
Medtr5g027110 Medicago truncatula HOM05D006946 ORTHO05D008634 3.4e-46 189.9 250 45.2
Hma1.2p1_0072F.1_g038320 Hydrangea macrophylla HOM05D006946 ORTHO05D008634 1.7e-45 187.6 171 53.8
AagrBONN_evm.TU.Sc2ySwM_117.2461 Anthoceros agrestis HOM05D006946 ORTHO05D008634 3.7e-45 186.4 326 36.8
PSO017G5203 Papaver somniferum HOM05D006946 ORTHO05D008634 2.3e-42 177.2 218 46.3
SMO352G0084 Selaginella moellendorffii HOM05D006946 ORTHO05D008634 1.9e-41 174.1 166 48.2
Potri.014G048000 Populus trichocarpa HOM05D006946 ORTHO05D008634 6.4e-37 159.1 150 58.0
Cpa.g.sc22.64 Carica papaya HOM05D006946 ORTHO05D008634 1.2e-35 154.8 105 70.5
CBR_g38735 Chara braunii HOM05D000019 ORTHO05D000353 1.4e-28 131.3 327 29.4
MCO13G420 Micromonas commoda HOM05D006946 ORTHO05D008634 3.6e-24 116.7 173 35.3
Cre13.g581801 Chlamydomonas reinhardtii HOM05D006946 ORTHO05D008634 3.4e-14 83.6 233 27.5
Cpa.g.sc22.65 Carica papaya HOM05D006946 ORTHO05D008634 9.9e-14 82.0 219 30.6
MD02G1213400 Malus domestica HOM05D006946 ORTHO05D008634 2.4e-12 77.4 106 41.5
Psat1g142640 Pisum sativum HOM05D006946 ORTHO05D008634 2.4e-12 77.4 119 43.7
Hma1.2p1_0072F.1_g038330 Hydrangea macrophylla HOM05D006946 ORTHO05D008634 1.2e-11 75.1 44 72.7
Psat2g026240 Pisum sativum HOM05D006946 ORTHO05D008634 6.0e-11 72.8 118 41.5
Os11g0565400 Oryza sativa ssp. japonica HOM05D006946 ORTHO05D008634 2.3e-10 70.9 48 64.6
Psat5g300840 Pisum sativum HOM05D006946 ORTHO05D008634 2.3e-10 70.9 67 55.2
Psat1g142600 Pisum sativum HOM05D006946 ORTHO05D008634 3.0e-10 70.5 118 41.5
AUR62044571 Chenopodium quinoa HOM05D006946 ORTHO05D008634 6.7e-10 69.3 381 24.9
HPP92_022101 Vanilla planifolia HOM05D006946 ORTHO05D008634 7.4e-09 65.9 52 57.7
QL04p089514 Quercus lobata HOM05D006946 ORTHO05D008634 2.0e-06 57.8 37 64.9


User provided reference genes

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