Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G01599 Aquilegia oxysepala HOM05D007055 ORTHO05D008943 5.3e-80 301.2 182 100.0
PSO541G2194 Papaver somniferum HOM05D007055 ORTHO05D008943 1.5e-37 160.2 110 72.7
PSO675G8693 Papaver somniferum HOM05D007055 ORTHO05D008943 1.5e-37 160.2 110 72.7
TAR627G0757 Trochodendron aralioides HOM05D007055 ORTHO05D008943 7.3e-37 157.9 105 74.3
Cfa019436 Carpinus fangiana HOM05D007055 ORTHO05D008943 6.8e-35 151.4 109 72.5
Psat1g002720 Pisum sativum HOM05D007055 ORTHO05D008943 1.2e-34 150.6 104 73.1
Nn7g37868 Nelumbo nucifera HOM05D007055 ORTHO05D008943 1.5e-34 150.2 104 69.2
Atru.chr12.2186 Acer truncatum HOM05D007055 ORTHO05D008943 2.0e-34 149.8 105 73.3
CiPaw.12G045200 Carya illinoinensis HOM05D007055 ORTHO05D008943 2.0e-34 149.8 105 73.3
Glyma.08G173000 Glycine max HOM05D007055 ORTHO05D008943 3.4e-34 149.1 100 77.0
Lalb_Chr25g0285111 Lupinus albus HOM05D007055 ORTHO05D008943 4.4e-34 148.7 100 77.0
arahy.Tifrunner.gnm1.ann1.4D1XNM Arachis hypogaea HOM05D007055 ORTHO05D008943 7.6e-34 147.9 104 72.1
arahy.Tifrunner.gnm1.ann1.FS1PG6 Arachis hypogaea HOM05D007055 ORTHO05D008943 2.2e-33 146.4 101 73.3
CSS0027098 Camellia sinensis var. sinensis HOM05D007055 ORTHO05D008943 2.9e-33 146.0 107 70.1
Ca_03690_v3 Cicer arietinum L. HOM05D007055 ORTHO05D008943 3.8e-33 145.6 104 71.2
PGR031G2131 Punica granatum HOM05D007055 ORTHO05D008943 4.9e-33 145.2 102 71.6
TWI38G0074 Tripterygium wilfordii HOM05D007055 ORTHO05D008943 6.4e-33 144.8 108 72.2
Actinidia07345 Actinidia chinensis HOM05D007055 ORTHO05D008943 1.1e-32 144.1 95 75.8
Glyma.15G254500 Glycine max HOM05D007055 ORTHO05D008943 1.1e-32 144.1 100 75.0
Lj3g0013500 Lotus japonicus HOM05D007055 ORTHO05D008943 1.1e-32 144.1 107 69.2
Manes.06G171200 Manihot esculenta HOM05D007055 ORTHO05D008943 1.1e-32 144.1 109 71.6
MBI18_g28200_MAGBIO Magnolia biondii HOM05D007055 ORTHO05D008943 1.4e-32 143.7 98 75.5
Ciclev10022701m.g Citrus clementina HOM05D007055 ORTHO05D008943 1.9e-32 143.3 105 73.3
Thecc.09G245700 Theobroma cacao HOM05D007055 ORTHO05D008943 2.4e-32 142.9 106 68.9
Lj5A202T45 Lonicera japonica HOM05D007055 ORTHO05D008943 5.4e-32 141.7 94 73.4
Sc03g0007920 Simmondsia chinensis HOM05D007055 ORTHO05D008943 5.4e-32 141.7 104 70.2
Medtr2g069750 Medicago truncatula HOM05D007055 ORTHO05D008943 9.2e-32 141.0 98 73.5
Phvul.005G056000 Phaseolus vulgaris HOM05D007055 ORTHO05D008943 9.2e-32 141.0 100 72.0
Duzib168G0293 Durio zibethinus HOM05D007055 ORTHO05D008943 2.1e-31 139.8 112 67.9
Rhsim06G0238300 Rhododendron simsii HOM05D007055 ORTHO05D008943 2.1e-31 139.8 175 47.4
Sabra11G0128800 Salix brachista HOM05D007055 ORTHO05D008943 2.1e-31 139.8 95 74.7
FAN11G2295 Fragaria x ananassa HOM05D007055 ORTHO05D008943 3.5e-31 139.0 111 60.4
Manes.06G170400 Manihot esculenta HOM05D007055 ORTHO05D008943 3.5e-31 139.0 98 73.5
Potri.011G144400 Populus trichocarpa HOM05D007055 ORTHO05D008943 3.5e-31 139.0 99 71.7
FAN21G0096 Fragaria x ananassa HOM05D007055 ORTHO05D008943 4.6e-31 138.7 111 60.4
RcHm_v2.0_Chr5g0026941 Rosa chinensis HOM05D007055 ORTHO05D008943 4.6e-31 138.7 109 64.2
Hund02291 Selenicereus undatus HOM05D007055 ORTHO05D008943 4.6e-31 138.7 105 62.9
Lsat_1_v5_gn_7_72120 Lactuca sativa HOM05D007055 ORTHO05D008943 6.0e-31 138.3 99 71.7
FvH4_3g16000 Fragaria vesca HOM05D007055 ORTHO05D008943 7.8e-31 137.9 99 66.7
COL.COLO4_07385 Corchorus olitorius HOM05D007055 ORTHO05D008943 1.0e-30 137.5 104 68.3
Gohir.A05G073500 Gossypium hirsutum HOM05D007055 ORTHO05D008943 1.3e-30 137.1 112 67.9
Potri.008G043200 Populus trichocarpa HOM05D007055 ORTHO05D008943 1.3e-30 137.1 99 70.7
FAN16G3461 Fragaria x ananassa HOM05D007055 ORTHO05D008943 1.7e-30 136.7 100 65.0
FAN21G3903 Fragaria x ananassa HOM05D007055 ORTHO05D008943 1.7e-30 136.7 111 59.5
Gohir.D05G076400 Gossypium hirsutum HOM05D007055 ORTHO05D008943 1.7e-30 136.7 112 67.9
ATR1098G113 Amborella trichopoda HOM05D007055 ORTHO05D008943 3.0e-30 136.0 111 58.6
DCAR_013747 Daucus carota HOM05D007055 ORTHO05D008943 3.0e-30 136.0 94 72.3
MSTRG.22977 Avicennia marina HOM05D007055 ORTHO05D008943 5.1e-30 135.2 101 66.3
HanXRQChr13g0408571 Helianthus annuus HOM05D007055 ORTHO05D008943 6.6e-30 134.8 99 67.7
Solyc07g066370.3 Solanum lycopersicum HOM05D007055 ORTHO05D008943 6.6e-30 134.8 121 60.3
Hma1.2p1_0151F.1_g066890 Hydrangea macrophylla HOM05D007055 ORTHO05D008943 8.6e-30 134.4 104 67.3
Sopen07g034550 Solanum pennellii HOM05D007055 ORTHO05D008943 1.9e-29 133.3 121 59.5
Gorai.009G077700 Gossypium raimondii HOM05D007055 ORTHO05D008943 3.3e-29 132.5 107 68.2
PGSC0003DMG400022130 Solanum tuberosum HOM05D007055 ORTHO05D008943 5.6e-29 131.7 119 59.7
Peaxi162Scf00232g01121 Petunia axillaris HOM05D007055 ORTHO05D008943 7.3e-29 131.3 111 61.3
SalBow5G4782 Salvia bowleyana HOM05D000091 ORTHO05D003024 7.3e-29 131.3 98 67.3
Manes.06G170801 Manihot esculenta HOM05D007055 ORTHO05D008943 9.6e-29 131.0 104 66.3
ECA240G0655 Erigeron canadensis HOM05D007055 ORTHO05D008943 2.8e-28 129.4 100 66.0
Sed0014529 Sechium edule HOM05D007055 ORTHO05D008943 2.8e-28 129.4 98 67.3
GSVIVG01020441001 Vitis vinifera HOM05D007055 ORTHO05D008943 3.6e-28 129.0 89 75.3
CANSAT56G2639 Cannabis sativa HOM05D007055 ORTHO05D008943 8.1e-28 127.9 102 65.7
MD05G1216100 Malus domestica HOM05D007055 ORTHO05D008943 1.4e-27 127.1 108 60.2
MELO3C010559.2 Cucumis melo HOM05D007055 ORTHO05D008943 2.4e-27 126.3 98 64.3
Migut.H02189 Erythranthe guttata HOM05D007055 ORTHO05D008943 3.1e-27 125.9 98 63.3
Ah.06g187070 Amaranthus hybridus HOM05D007055 ORTHO05D008943 4.0e-27 125.6 98 62.2
ClCG11G016330 Citrullus lanatus HOM05D007055 ORTHO05D008943 5.2e-27 125.2 112 58.9
CsaV3_4G031800 Cucumis sativus L. HOM05D007055 ORTHO05D008943 5.2e-27 125.2 98 63.3
Manes.06G169900 Manihot esculenta HOM05D007055 ORTHO05D008943 5.2e-27 125.2 103 64.1
Cc05_g15950 Coffea canephora HOM05D007055 ORTHO05D008943 6.9e-27 124.8 101 61.4
CAN.G943.31 Capsicum annuum HOM05D007055 ORTHO05D008943 5.8e-26 121.7 108 61.1
Thhalv10019307m.g Eutrema salsugineum HOM05D007055 ORTHO05D008943 7.6e-26 121.3 103 57.3
EL10Ac4g08563 Beta vulgaris HOM05D007055 ORTHO05D008943 1.3e-25 120.6 91 67.0
CARHR072740 Cardamine hirsuta HOM05D007055 ORTHO05D008943 1.3e-25 120.6 104 56.7
Duzib150G0143 Durio zibethinus HOM05D007055 ORTHO05D008943 1.3e-25 120.6 84 75.0
Oeu002805.1 Olea europaea HOM05D007055 ORTHO05D008943 1.7e-25 120.2 91 64.8
AT1G79070 Arabidopsis thaliana HOM05D007055 ORTHO05D008943 2.9e-25 119.4 102 55.9
HPP92_002254 Vanilla planifolia HOM05D007055 ORTHO05D008943 2.9e-25 119.4 79 75.9
THA.LOC104808116 Tarenaya hassleriana HOM05D007055 ORTHO05D008943 4.9e-25 118.6 94 58.5
CDE12G0729 Ceratophyllum demersum HOM05D007055 ORTHO05D008943 1.1e-24 117.5 107 56.1
Eucgr.F03184 Eucalyptus grandis HOM05D007055 ORTHO05D008943 1.4e-24 117.1 100 59.0
Sp5g34120 Schrenkiella parvula HOM05D007055 ORTHO05D008943 1.4e-24 117.1 102 56.9
AL2G39530 Arabidopsis lyrata HOM05D007055 ORTHO05D008943 2.4e-24 116.3 102 54.9
SGA_v2.0_scaffold2G00966 Striga asiatica HOM05D007055 ORTHO05D008943 3.2e-24 115.9 101 54.5
AUR62044625 Chenopodium quinoa HOM05D007055 ORTHO05D008943 5.4e-24 115.2 84 65.5
BcaB02g08664 Brassica carinata HOM05D007055 ORTHO05D008943 7.1e-24 114.8 102 52.9
Nitab4.5_0001749g0090 Nicotiana tabacum HOM05D007055 ORTHO05D008943 7.1e-24 114.8 131 51.1
Prupe.4G143100 Prunus persica HOM05D007055 ORTHO05D008943 1.2e-23 114.0 102 57.8
A07p44210 Brassica napus HOM05D007055 ORTHO05D008943 1.6e-23 113.6 102 52.9
Manes.06G170100 Manihot esculenta HOM05D007055 ORTHO05D008943 1.6e-23 113.6 89 66.3
BraA07t31929Z Brassica rapa HOM05D007055 ORTHO05D008943 3.5e-23 112.5 91 58.2
BolC6t40312H Brassica oleracea HOM05D007055 ORTHO05D008943 4.6e-23 112.1 102 52.0
C06p52940 Brassica napus HOM05D007055 ORTHO05D008943 1.0e-22 110.9 91 57.1
BcaC08g47470 Brassica carinata HOM05D007055 ORTHO05D008943 1.3e-22 110.5 102 51.0
unitig_699.g19681 Utricularia gibba HOM05D007055 ORTHO05D008943 1.7e-22 110.2 98 57.1
Aa31LG4G1920 Aethionema arabicum HOM05D007055 ORTHO05D008943 3.0e-22 109.4 92 57.6
BcaNung04909 Brassica carinata HOM05D007055 ORTHO05D008943 5.1e-22 108.6 90 56.7
AUR62043058 Chenopodium quinoa HOM05D007055 ORTHO05D008943 6.6e-22 108.2 131 45.0
Pp3c15_3290 Physcomitrium patens HOM05D007055 ORTHO05D008943 8.7e-22 107.8 106 52.8
Carub.0002s2594 Capsella rubella HOM05D007055 ORTHO05D008943 1.1e-21 107.5 91 56.0
Manes.06G171100 Manihot esculenta HOM05D007055 ORTHO05D008943 1.3e-20 104.0 73 75.3
Mapoly0112s0058 Marchantia polymorpha HOM05D007055 ORTHO05D008943 6.9e-19 98.2 94 50.0
Os08g0129900 Oryza sativa ssp. japonica HOM05D007055 ORTHO05D008943 2.6e-18 96.3 106 45.3
SHI01886 Sapria himalayana HOM05D007055 ORTHO05D008943 2.6e-18 96.3 88 56.8
BcaC08g45387 Brassica carinata HOM05D007055 ORTHO05D008943 5.8e-18 95.1 98 48.0
TPR.G9749 Trifolium pratense HOM05D007055 ORTHO05D008943 1.7e-17 93.6 61 78.7
Zm00001eb173230 Zea mays HOM05D007055 ORTHO05D008943 1.7e-17 93.6 98 46.9
CBR_g41533 Chara braunii HOM05D000019 ORTHO05D000048 2.9e-17 92.8 93 47.3
SalBow5G1530 Salvia bowleyana HOM05D000091 ORTHO05D003024 1.9e-16 90.1 71 63.4
vmacro11656 Vaccinium macrocarpon HOM05D007055 ORTHO05D008943 7.1e-16 88.2 53 84.9
SMO367G1177 Selaginella moellendorffii HOM05D007055 ORTHO05D008943 2.1e-15 86.7 90 51.1
AagrBONN_evm.TU.Sc2ySwM_228.2782 Anthoceros agrestis HOM05D007055 ORTHO05D008943 4.6e-15 85.5 94 44.7
Nitab4.5_0007742g0030 Nicotiana tabacum HOM05D007055 ORTHO05D008943 6.7e-14 81.6 90 48.9
TPR.G3235 Trifolium pratense HOM05D007055 ORTHO05D008943 1.8e-06 57.0 42 64.3
Haze_08531 Corylus avellana HOM05D007055 ORTHO05D008943 2.3e-06 56.6 43 60.5


User provided reference genes

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