Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G01586 Aquilegia oxysepala HOM05D006002 ORTHO05D007651 7.4e-217 756.9 379 100.0
Nn3g20175 Nelumbo nucifera HOM05D006002 ORTHO05D007651 4.5e-129 465.3 374 63.6
TAR627G1081 Trochodendron aralioides HOM05D006002 ORTHO05D007651 1.3e-128 463.8 376 64.9
PSO675G3741 Papaver somniferum HOM05D006002 ORTHO05D007651 2.5e-124 449.5 383 61.6
PSO541G1619 Papaver somniferum HOM05D006002 ORTHO05D007651 9.6e-124 447.6 383 61.1
Prupe.4G144100 Prunus persica HOM05D006002 ORTHO05D007651 1.6e-123 446.8 340 65.3
QL04p088541 Quercus lobata HOM05D006002 ORTHO05D007651 1.4e-122 443.7 351 61.3
Rhsim04G0006400 Rhododendron simsii HOM05D006002 ORTHO05D007651 6.9e-122 441.4 352 61.6
Eucgr.F01438 Eucalyptus grandis HOM05D006002 ORTHO05D007651 2.6e-121 439.5 331 63.4
Actinidia37107 Actinidia chinensis HOM05D006002 ORTHO05D007651 1.7e-120 436.8 370 59.7
Nitab4.5_0001235g0050 Nicotiana tabacum HOM05D006002 ORTHO05D007651 8.4e-120 434.5 347 60.5
CAN.G943.23 Capsicum annuum HOM05D006002 ORTHO05D007651 1.1e-119 434.1 349 61.6
Sopen07g034460 Solanum pennellii HOM05D006002 ORTHO05D007651 2.4e-119 433.0 350 61.4
PGSC0003DMG400022243 Solanum tuberosum HOM05D006002 ORTHO05D007651 2.4e-119 433.0 349 61.3
Ciclev10020646m.g Citrus clementina HOM05D006002 ORTHO05D007651 3.2e-119 432.6 374 58.3
Lsat_1_v5_gn_7_116060 Lactuca sativa HOM05D006002 ORTHO05D007651 4.2e-119 432.2 354 61.0
Potri.003G221400 Populus trichocarpa HOM05D006002 ORTHO05D007651 4.2e-119 432.2 353 61.2
RcHm_v2.0_Chr5g0027061 Rosa chinensis HOM05D006002 ORTHO05D007651 4.2e-119 432.2 352 62.2
Hma1.2p1_0193F.1_g084470 Hydrangea macrophylla HOM05D006002 ORTHO05D007651 9.3e-119 431.0 329 62.3
Psat3g026200 Pisum sativum HOM05D006002 ORTHO05D007651 9.3e-119 431.0 340 62.6
Hma1.2p1_0193F.1_g084460 Hydrangea macrophylla HOM05D006002 ORTHO05D007651 1.2e-118 430.6 344 60.5
CSS0008604 Camellia sinensis var. sinensis HOM05D006002 ORTHO05D007651 2.7e-118 429.5 357 60.5
vmacro09790 Vaccinium macrocarpon HOM05D006002 ORTHO05D007651 2.7e-118 429.5 352 61.1
Glyma.15G260100 Glycine max HOM05D006002 ORTHO05D007651 3.5e-118 429.1 370 58.9
MD10G1197800 Malus domestica HOM05D006002 ORTHO05D007651 4.6e-118 428.7 382 58.6
Manes.03G102600 Manihot esculenta HOM05D006002 ORTHO05D007651 1.8e-117 426.8 361 59.8
Solyc07g066280.3 Solanum lycopersicum HOM05D006002 ORTHO05D007651 1.8e-117 426.8 349 60.2
Medtr7g107330 Medicago truncatula HOM05D006002 ORTHO05D007651 5.1e-117 425.2 354 60.2
Nitab4.5_0000294g0110 Nicotiana tabacum HOM05D006002 ORTHO05D007651 8.7e-117 424.5 347 59.1
TWI53G1943 Tripterygium wilfordii HOM05D006002 ORTHO05D007651 3.3e-116 422.5 345 60.9
arahy.Tifrunner.gnm1.ann1.HWL53Q Arachis hypogaea HOM05D006002 ORTHO05D007651 1.3e-115 420.6 379 58.0
arahy.Tifrunner.gnm1.ann1.0RH0I3 Arachis hypogaea HOM05D006002 ORTHO05D007651 1.6e-115 420.2 376 58.0
Peaxi162Scf00232g00102 Petunia axillaris HOM05D006002 ORTHO05D007651 1.6e-115 420.2 348 60.1
Phvul.005G050900 Phaseolus vulgaris HOM05D006002 ORTHO05D007651 1.6e-115 420.2 356 60.7
Ca_09098_v3 Cicer arietinum L. HOM05D006002 ORTHO05D007651 2.1e-115 419.9 351 60.1
Sc03g0007860 Simmondsia chinensis HOM05D006002 ORTHO05D007651 2.1e-115 419.9 369 58.3
COL.COLO4_25103 Corchorus olitorius HOM05D006002 ORTHO05D007651 4.8e-115 418.7 347 60.5
FvH4_3g16091 Fragaria vesca HOM05D006002 ORTHO05D007651 8.2e-115 417.9 328 61.0
FAN11G0453 Fragaria x ananassa HOM05D006002 ORTHO05D007651 8.2e-115 417.9 328 61.3
PGR083G2675 Punica granatum HOM05D006002 ORTHO05D007651 8.2e-115 417.9 334 62.0
Lj3g0018048 Lotus japonicus HOM05D006002 ORTHO05D007651 2.4e-114 416.4 374 58.6
Cc05_g15870 Coffea canephora HOM05D006002 ORTHO05D007651 3.1e-114 416.0 343 61.8
FAN16G0275 Fragaria x ananassa HOM05D006002 ORTHO05D007651 6.9e-114 414.8 333 59.8
FAN25G3512 Fragaria x ananassa HOM05D006002 ORTHO05D007651 1.2e-113 414.1 328 61.0
THA.LOC104819332 Tarenaya hassleriana HOM05D006002 ORTHO05D007651 1.5e-113 413.7 339 59.3
Glyma.08G167200 Glycine max HOM05D006002 ORTHO05D007651 2.0e-113 413.3 371 57.7
HanXRQChr11g0335201 Helianthus annuus HOM05D006002 ORTHO05D007651 7.6e-113 411.4 346 59.2
MBI02_g43301_MAGBIO Magnolia biondii HOM05D006002 ORTHO05D007651 7.6e-113 411.4 368 57.9
Lj8A185G55 Lonicera japonica HOM05D006002 ORTHO05D007651 2.2e-112 409.8 326 60.7
VMungo1080G0998 Vigna mungo HOM05D001395 ORTHO05D002039 1.4e-111 407.1 327 61.8
Hund02296 Selenicereus undatus HOM05D006002 ORTHO05D007651 2.5e-111 406.4 341 58.9
Thhalv10004403m.g Eutrema salsugineum HOM05D006002 ORTHO05D007651 4.2e-111 405.6 339 58.7
Sabra03G0164800 Salix brachista HOM05D006002 ORTHO05D007651 5.5e-111 405.2 331 61.3
Ah.04g163380 Amaranthus hybridus HOM05D006002 ORTHO05D007651 7.1e-111 404.8 363 57.3
Eucgr.F01442 Eucalyptus grandis HOM05D006002 ORTHO05D007651 9.3e-111 404.4 315 61.9
Gorai.009G080200 Gossypium raimondii HOM05D006002 ORTHO05D007651 2.1e-110 403.3 367 57.8
CARHR278060 Cardamine hirsuta HOM05D006002 ORTHO05D007651 3.5e-110 402.5 344 59.9
Haze_07820 Corylus avellana HOM05D006002 ORTHO05D007651 6.0e-110 401.7 306 63.4
Migut.M01570 Erythranthe guttata HOM05D006002 ORTHO05D007651 1.3e-109 400.6 364 54.9
Gohir.A05G076100 Gossypium hirsutum HOM05D006002 ORTHO05D007651 1.3e-109 400.6 367 57.2
ClCG11G016270 Citrullus lanatus HOM05D006002 ORTHO05D007651 2.3e-109 399.8 336 58.3
BolC3t18471H Brassica oleracea HOM05D006002 ORTHO05D007651 6.7e-109 398.3 334 58.4
CANSAT56G1259 Cannabis sativa HOM05D006002 ORTHO05D007651 8.7e-109 397.9 362 57.7
CDE02G2905 Ceratophyllum demersum HOM05D006002 ORTHO05D007651 1.9e-108 396.7 356 56.5
EL10Ac4g08518 Beta vulgaris HOM05D006002 ORTHO05D007651 2.5e-108 396.4 366 55.7
BcaC01g02672 Brassica carinata HOM05D006002 ORTHO05D007651 2.5e-108 396.4 333 58.3
Sp2g27210 Schrenkiella parvula HOM05D006002 ORTHO05D007651 2.5e-108 396.4 349 57.0
MSTRG.16122 Avicennia marina HOM05D006002 ORTHO05D007651 3.3e-108 396.0 360 55.3
ECA236G2913 Erigeron canadensis HOM05D006002 ORTHO05D007651 3.3e-108 396.0 346 57.8
A06p30870 Brassica napus HOM05D006002 ORTHO05D007651 7.4e-108 394.8 349 56.7
Duzib168G0541 Durio zibethinus HOM05D006002 ORTHO05D007651 7.4e-108 394.8 364 57.4
QL04p088993 Quercus lobata HOM05D006002 ORTHO05D007651 7.4e-108 394.8 284 65.1
SGA_v2.0_scaffold7G03564 Striga asiatica HOM05D006002 ORTHO05D007651 7.4e-108 394.8 331 58.3
CsaV3_2G022200 Cucumis sativus L. HOM05D006002 ORTHO05D007651 1.3e-107 394.0 350 57.1
CiPaw.11G062100 Carya illinoinensis HOM05D006002 ORTHO05D007651 1.6e-107 393.7 341 57.8
AT5G64150 Arabidopsis thaliana HOM05D006002 ORTHO05D007651 2.2e-107 393.3 340 57.9
BcaB02g09782 Brassica carinata HOM05D006002 ORTHO05D007651 2.2e-107 393.3 337 58.5
Thecc.03G324000 Theobroma cacao HOM05D006002 ORTHO05D007651 2.8e-107 392.9 385 54.0
unitig_748.g7639 Utricularia gibba HOM05D006002 ORTHO05D007651 2.8e-107 392.9 354 54.2
Aa31LG1G17780 Aethionema arabicum HOM05D006002 ORTHO05D007651 4.8e-107 392.1 344 56.4
Carub.0008s2494 Capsella rubella HOM05D006002 ORTHO05D007651 4.1e-106 389.0 350 57.4
AL8G41420 Arabidopsis lyrata HOM05D006002 ORTHO05D007651 5.3e-106 388.7 349 56.7
Sed0002243 Sechium edule HOM05D006002 ORTHO05D007651 5.3e-106 388.7 348 56.3
C03p62100 Brassica napus HOM05D006002 ORTHO05D007651 1.3e-104 384.0 328 57.6
BraA06t26026Z Brassica rapa HOM05D006002 ORTHO05D007651 1.9e-103 380.2 343 55.4
Lalb_Chr25g0284701 Lupinus albus HOM05D006002 ORTHO05D007651 3.2e-103 379.4 287 63.1
Gohir.D05G078800 Gossypium hirsutum HOM05D006002 ORTHO05D007651 3.0e-101 372.9 334 57.5
MBI02_g20986_MAGBIO Magnolia biondii HOM05D006002 ORTHO05D007651 1.9e-100 370.2 393 53.9
SalBow8G1862 Salvia bowleyana HOM05D006002 ORTHO05D007651 1.3e-99 367.5 326 56.7
MELO3C010553.2 Cucumis melo HOM05D006002 ORTHO05D007651 3.7e-99 365.9 305 58.7
Gohir.1Z049302 Gossypium hirsutum HOM05D006002 ORTHO05D007651 9.1e-98 361.3 354 54.5
GSVIVG01020461001 Vitis vinifera HOM05D006002 ORTHO05D007651 7.7e-97 358.2 253 66.0
HPP92_001894 Vanilla planifolia HOM05D006002 ORTHO05D004222 1.2e-94 350.9 337 55.8
QL03p043202 Quercus lobata HOM05D006002 ORTHO05D007651 8.8e-93 344.7 263 63.9
SEGI_37419 Sequoiadendron giganteum HOM05D006002 ORTHO05D007651 1.2e-89 334.3 285 56.5
ATR0165G036 Amborella trichopoda HOM05D006002 ORTHO05D007651 4.2e-87 325.9 256 61.3
Os12g0612500 Oryza sativa ssp. japonica HOM05D006002 ORTHO05D007651 6.1e-86 322.0 341 49.3
Dinv42524 Davidia involucrata HOM05D006002 ORTHO05D007651 2.0e-84 317.0 359 47.4
Atru.chr2.1886 Acer truncatum HOM05D006002 ORTHO05D007651 2.6e-76 290.0 267 58.1
SMO145G0236 Selaginella moellendorffii HOM05D006002 ORTHO05D007651 4.4e-76 289.3 333 46.5
MD05G1214000 Malus domestica HOM05D006002 ORTHO05D007651 7.5e-76 288.5 251 58.2
AUR62041934 Chenopodium quinoa HOM05D006002 ORTHO05D007651 5.9e-73 278.9 318 47.8
Pp3c1_22930 Physcomitrium patens HOM05D006002 ORTHO05D007651 3.2e-71 273.1 470 35.5
AUR62035491 Chenopodium quinoa HOM05D006002 ORTHO05D007651 5.5e-71 272.3 306 47.1
Mapoly0051s0043 Marchantia polymorpha HOM05D006002 ORTHO05D007651 8.8e-69 265.0 455 35.8
Cfa022974 Carpinus fangiana HOM05D006002 ORTHO05D007651 1.2e-68 264.6 249 56.6
AagrBONN_evm.TU.Sc2ySwM_344.4971 Anthoceros agrestis HOM05D006002 ORTHO05D007651 5.4e-66 255.8 326 44.2
Potri.018G000850 Populus trichocarpa HOM05D006002 ORTHO05D007651 7.0e-66 255.4 316 47.2
Oeu052016.1 Olea europaea HOM05D006002 ORTHO05D007651 2.7e-65 253.4 227 54.6
Cpa.g.sc42.79 Carica papaya HOM05D006002 ORTHO05D007651 5.0e-64 249.2 222 55.9
CBR_g8978 Chara braunii HOM05D006002 ORTHO05D007651 3.6e-62 243.0 238 51.7
Actinidia35439 Actinidia chinensis HOM05D006002 ORTHO05D007651 2.2e-59 233.8 201 58.2
TPR.G18376 Trifolium pratense HOM05D006002 ORTHO05D007651 1.8e-53 214.2 160 65.0
TPR.G32276 Trifolium pratense HOM05D006002 ORTHO05D007651 2.2e-51 207.2 353 35.1
Potri.001G003632 Populus trichocarpa HOM05D006002 ORTHO05D007651 3.6e-46 189.9 152 61.8
QL04p062372 Quercus lobata HOM05D006002 ORTHO05D007651 3.1e-45 186.8 130 69.2
MCO01G477 Micromonas commoda HOM05D006002 ORTHO05D007651 9.8e-44 181.8 387 32.3
Cpa.g.sc42.82 Carica papaya HOM05D006002 ORTHO05D007651 6.4e-43 179.1 126 66.7
QL04p088694 Quercus lobata HOM05D006002 ORTHO05D007651 5.4e-42 176.0 175 54.3
Zm00001eb031660 Zea mays HOM05D006002 ORTHO05D007651 1.0e-40 171.8 127 62.2
PRCOL_00003514 Prasinoderma coloniale HOM05D006002 ORTHO05D007651 4.0e-37 159.8 418 30.9
Cre07.g337516 Chlamydomonas reinhardtii HOM05D006002 ORTHO05D007651 2.0e-36 157.5 267 37.1
MD05G1214300 Malus domestica HOM05D006002 ORTHO05D007651 2.6e-36 157.1 109 72.5
SEGI_15629 Sequoiadendron giganteum HOM05D006002 ORTHO05D007651 2.1e-33 147.5 128 53.1
COL.COLO4_30126 Corchorus olitorius HOM05D006002 ORTHO05D007651 1.1e-26 125.2 85 64.7
BcaB04g17517 Brassica carinata HOM05D006002 ORTHO05D007651 7.8e-25 119.0 78 67.9
QL04p089617 Quercus lobata HOM05D002182 ORTHO05D004671 2.3e-24 117.5 126 53.2
QL04p089868 Quercus lobata HOM05D006002 ORTHO05D007651 4.6e-17 93.2 65 64.6
QL03p043192 Quercus lobata HOM05D006002 ORTHO05D007651 2.3e-16 90.9 60 70.0
CAN.G42.13 Capsicum annuum HOM05D006002 ORTHO05D007651 5.1e-08 63.2 70 45.7
Cfa023409 Carpinus fangiana HOM05D006002 ORTHO05D126491 6.7e-08 62.8 180 29.4
CAN.G548.23 Capsicum annuum HOM05D006002 ORTHO05D007651 8.7e-08 62.4 119 31.9


User provided reference genes

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