Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G01504 Aquilegia oxysepala HOM05D005284 ORTHO05D006609 2.9e-165 585.1 286 100.0
Aqoxy1G01508 Aquilegia oxysepala HOM05D005284 ORTHO05D006609 2.9e-165 585.1 286 100.0
TAR626G0222 Trochodendron aralioides HOM05D005284 ORTHO05D006609 3.7e-120 435.3 284 75.0
Dinv04290 Davidia involucrata HOM05D005284 ORTHO05D006609 1.1e-116 423.7 284 71.8
Ciclev10016195m.g Citrus clementina HOM05D005284 ORTHO05D006609 1.6e-115 419.9 285 70.5
PSO541G1959 Papaver somniferum HOM05D005284 ORTHO05D006609 2.8e-115 419.1 287 70.4
PSO675G4367 Papaver somniferum HOM05D005284 ORTHO05D006609 2.8e-115 419.1 287 70.4
Atru.chr10.695 Acer truncatum HOM05D005284 ORTHO05D006609 4.0e-114 415.2 288 69.1
Nn7g37791 Nelumbo nucifera HOM05D005284 ORTHO05D006609 6.8e-114 414.5 284 71.8
HanXRQChr12g0359761 Helianthus annuus HOM05D005284 ORTHO05D006609 8.9e-114 414.1 284 70.4
Rhsim13G0125000 Rhododendron simsii HOM05D005284 ORTHO05D006609 1.5e-113 413.3 284 70.8
vmacro03466 Vaccinium macrocarpon HOM05D005284 ORTHO05D006609 2.0e-113 412.9 284 69.0
Gohir.D10G005900 Gossypium hirsutum HOM05D005284 ORTHO05D006609 4.4e-113 411.8 284 68.0
MSTRG.7559 Avicennia marina HOM05D005284 ORTHO05D006609 5.8e-113 411.4 284 68.7
DCAR_000834 Daucus carota HOM05D005284 ORTHO05D006609 7.5e-113 411.0 284 69.0
Gorai.011G006700 Gossypium raimondii HOM05D005284 ORTHO05D006609 7.5e-113 411.0 284 68.0
CAN.G39.30 Capsicum annuum HOM05D005284 ORTHO05D006609 2.2e-112 409.5 284 69.4
Sopen02g006280 Solanum pennellii HOM05D005284 ORTHO05D006609 3.7e-112 408.7 284 70.1
Gohir.A10G005900 Gossypium hirsutum HOM05D005284 ORTHO05D006609 4.9e-112 408.3 284 67.6
Ah.01g003600 Amaranthus hybridus HOM05D005284 ORTHO05D006609 1.1e-111 407.1 284 66.9
Actinidia29265 Actinidia chinensis HOM05D005284 ORTHO05D006609 1.4e-111 406.8 284 68.3
Lsat_1_v5_gn_5_75320 Lactuca sativa HOM05D005284 ORTHO05D006609 1.4e-111 406.8 284 70.1
Cpa.g.sc489.2 Carica papaya HOM05D005284 ORTHO05D006609 3.2e-111 405.6 284 66.9
Migut.M01924 Erythranthe guttata HOM05D005284 ORTHO05D006609 3.2e-111 405.6 289 67.8
CDE02G0074 Ceratophyllum demersum HOM05D005284 ORTHO05D006609 7.0e-111 404.4 272 71.0
Cc08_g07170 Coffea canephora HOM05D005284 ORTHO05D006609 1.6e-110 403.3 284 69.0
Duzib235G1425 Durio zibethinus HOM05D005284 ORTHO05D006609 4.6e-110 401.7 284 66.5
MD10G1243300 Malus domestica HOM05D005284 ORTHO05D006609 1.3e-109 400.2 285 68.4
Eucgr.D01014 Eucalyptus grandis HOM05D005284 ORTHO05D006609 2.3e-109 399.4 284 68.0
Thecc.06G009000 Theobroma cacao HOM05D005284 ORTHO05D006609 6.6e-109 397.9 286 66.8
Prupe.4G100600 Prunus persica HOM05D005284 ORTHO05D006609 8.6e-109 397.5 285 68.8
RcHm_v2.0_Chr5g0018081 Rosa chinensis HOM05D005284 ORTHO05D006609 1.5e-108 396.7 285 67.7
CANSAT78G1346 Cannabis sativa HOM05D005284 ORTHO05D006609 1.9e-108 396.4 286 66.1
CiPaw.09G147600 Carya illinoinensis HOM05D005284 ORTHO05D006609 1.9e-108 396.4 284 66.5
CsaV3_6G052590 Cucumis sativus L. HOM05D005284 ORTHO05D006609 4.3e-108 395.2 284 67.3
Cfa000771 Carpinus fangiana HOM05D005284 ORTHO05D006609 1.2e-107 393.7 284 68.0
MD05G1265300 Malus domestica HOM05D005284 ORTHO05D006609 2.1e-107 392.9 284 66.9
CDE05G2614 Ceratophyllum demersum HOM05D005284 ORTHO05D006609 3.6e-107 392.1 287 66.9
MELO3C007049.2 Cucumis melo HOM05D005284 ORTHO05D006609 4.7e-107 391.7 284 66.2
FvH4_3g11170 Fragaria vesca HOM05D005284 ORTHO05D006609 4.7e-107 391.7 285 66.3
Sed0002797 Sechium edule HOM05D005284 ORTHO05D006609 4.7e-107 391.7 285 66.7
THA.LOC104812070 Tarenaya hassleriana HOM05D005284 ORTHO05D006609 1.8e-106 389.8 284 65.5
EL10Ac9g22329 Beta vulgaris HOM05D005284 ORTHO05D006609 5.2e-106 388.3 284 65.5
TWI38G1381 Tripterygium wilfordii HOM05D005284 ORTHO05D006609 1.5e-105 386.7 284 64.4
QL05p064527 Quercus lobata HOM05D005284 ORTHO05D006609 5.8e-105 384.8 284 66.5
BraA06t27590Z Brassica rapa HOM05D005284 ORTHO05D006609 2.2e-104 382.9 284 63.7
Thhalv10000956m.g Eutrema salsugineum HOM05D005284 ORTHO05D006609 2.9e-104 382.5 284 62.7
Lalb_Chr12g0208701 Lupinus albus HOM05D005284 ORTHO05D006609 6.4e-104 381.3 286 66.4
Medtr4g094452 Medicago truncatula HOM05D005284 ORTHO05D006609 6.4e-104 381.3 285 64.6
A06p47190 Brassica napus HOM05D005284 ORTHO05D006609 1.1e-103 380.6 284 63.4
Potri.011G157500 Populus trichocarpa HOM05D005284 ORTHO05D006609 1.1e-103 380.6 284 64.1
CARHR178630 Cardamine hirsuta HOM05D005284 ORTHO05D006609 9.2e-103 377.5 284 63.0
Glyma.08G079300 Glycine max HOM05D005284 ORTHO05D006609 1.6e-102 376.7 286 64.7
Glyma.05G124100 Glycine max HOM05D005284 ORTHO05D006609 2.7e-102 375.9 286 64.3
Lj4g0006881 Lotus japonicus HOM05D005284 ORTHO05D006609 2.7e-102 375.9 276 65.9
Psat7g094280 Pisum sativum HOM05D005284 ORTHO05D006609 2.7e-102 375.9 286 64.0
Nitab4.5_0000607g0120 Nicotiana tabacum HOM05D005284 ORTHO05D006609 3.5e-102 375.6 394 51.5
Aa31LG9G8740 Aethionema arabicum HOM05D005284 ORTHO05D006609 4.6e-102 375.2 284 62.7
BcaC06g31615 Brassica carinata HOM05D005284 ORTHO05D006609 6.0e-102 374.8 280 63.6
BcaC06g34553 Brassica carinata HOM05D005284 ORTHO05D006609 6.0e-102 374.8 284 63.0
C07p27240 Brassica napus HOM05D005284 ORTHO05D006609 6.0e-102 374.8 284 63.0
BolC7t43252H Brassica oleracea HOM05D005284 ORTHO05D006609 6.0e-102 374.8 284 63.0
Carub.0008s0404 Capsella rubella HOM05D005284 ORTHO05D006609 6.0e-102 374.8 284 63.0
BcaC04g21829 Brassica carinata HOM05D005284 ORTHO05D006609 7.8e-102 374.4 284 62.7
Os03g0780900 Oryza sativa ssp. japonica HOM05D005284 ORTHO05D006609 3.9e-101 372.1 292 62.3
SalBow8G0467 Salvia bowleyana HOM05D005284 ORTHO05D006609 5.1e-101 371.7 318 58.8
arahy.Tifrunner.gnm1.ann1.06Y4PY Arachis hypogaea HOM05D005284 ORTHO05D006609 1.1e-100 370.5 284 64.8
A09p21140 Brassica napus HOM05D005284 ORTHO05D006609 1.1e-100 370.5 285 62.8
BraA09t37720Z Brassica rapa HOM05D005284 ORTHO05D006609 1.1e-100 370.5 285 62.8
Ca_18306_v3 Cicer arietinum L. HOM05D005284 ORTHO05D006609 1.1e-100 370.5 286 62.9
Phvul.002G201500 Phaseolus vulgaris HOM05D005284 ORTHO05D006609 1.1e-100 370.5 286 64.3
HPP92_000943 Vanilla planifolia HOM05D005284 ORTHO05D006609 1.1e-100 370.5 276 64.5
ATR0763G041 Amborella trichopoda HOM05D005284 ORTHO05D006609 1.5e-100 370.2 273 64.5
C09p26950 Brassica napus HOM05D005284 ORTHO05D006609 1.5e-100 370.2 285 62.5
BolC9t55580H Brassica oleracea HOM05D005284 ORTHO05D006609 1.5e-100 370.2 285 62.5
ECA234G4512 Erigeron canadensis HOM05D005284 ORTHO05D006609 2.5e-100 369.4 266 66.5
SalBow3G1375 Salvia bowleyana HOM05D005284 ORTHO05D006609 4.3e-100 368.6 304 59.9
Sp2g09280 Schrenkiella parvula HOM05D005284 ORTHO05D006609 5.6e-100 368.2 284 62.3
BcaB07g30944 Brassica carinata HOM05D005284 ORTHO05D006609 7.3e-100 367.9 284 61.6
AL8G15400 Arabidopsis lyrata HOM05D005284 ORTHO05D006609 2.8e-99 365.9 284 61.6
Nitab4.5_0000100g0010 Nicotiana tabacum HOM05D005284 ORTHO05D006609 6.2e-99 364.8 387 51.2
VMungo0251G0080 Vigna mungo HOM05D005284 ORTHO05D006609 3.1e-98 362.5 286 63.3
COL.COLO4_26880 Corchorus olitorius HOM05D005284 ORTHO05D006609 5.2e-98 361.7 327 55.7
Oeu000506.1 Olea europaea HOM05D005284 ORTHO05D006609 2.0e-97 359.8 358 52.2
Lj2C336G9 Lonicera japonica HOM05D005284 ORTHO05D006609 2.2e-96 356.3 284 62.3
Peaxi162Scf00155g00513 Petunia axillaris HOM05D005284 ORTHO05D006609 6.4e-96 354.8 284 63.0
Manes.14G126000 Manihot esculenta HOM05D005284 ORTHO05D006609 4.1e-95 352.1 240 68.8
MBI18_g27137_MAGBIO Magnolia biondii HOM05D005284 ORTHO05D006609 7.8e-94 347.8 327 55.0
SEGI_24201 Sequoiadendron giganteum HOM05D005284 ORTHO05D006609 6.6e-93 344.7 284 59.9
Sc04g0004240 Simmondsia chinensis HOM05D005284 ORTHO05D006609 2.5e-92 342.8 240 67.9
Sabra11G0142700 Salix brachista HOM05D005284 ORTHO05D006609 2.1e-91 339.7 240 65.8
unitig_748.g7349 Utricularia gibba HOM05D005284 ORTHO05D006609 1.1e-87 327.4 285 56.5
TPR.G23781 Trifolium pratense HOM05D005284 ORTHO05D006609 4.2e-87 325.5 271 59.8
SGA_v2.0_scaffold1G00293 Striga asiatica HOM05D006189 ORTHO05D007765 7.8e-86 321.2 240 64.2
FAN25G2940 Fragaria x ananassa HOM05D005284 ORTHO05D006609 1.6e-83 313.5 285 56.8
FAN16G1000 Fragaria x ananassa HOM05D005284 ORTHO05D006609 2.8e-83 312.8 285 56.5
FAN21G1306 Fragaria x ananassa HOM05D005284 ORTHO05D006609 2.8e-83 312.8 285 56.5
SMO364G0300 Selaginella moellendorffii HOM05D005284 ORTHO05D006609 1.1e-82 310.8 260 55.8
GSVIVG01021778001 Vitis vinifera HOM05D005284 ORTHO05D006609 3.5e-78 295.8 188 73.9
Zm00001eb059610 Zea mays HOM05D005284 ORTHO05D006609 3.9e-77 292.4 300 51.3
Solyc02g021700.4 Solanum lycopersicum HOM05D005284 ORTHO05D006609 7.4e-76 288.1 189 71.4
PGR083G0243 Punica granatum HOM05D005284 ORTHO05D006609 1.3e-75 287.3 218 63.3
Mapoly0083s0001 Marchantia polymorpha HOM05D005284 ORTHO05D006609 1.4e-74 283.9 282 52.8
AT5G44450 Arabidopsis thaliana HOM05D005284 ORTHO05D006609 2.6e-73 279.6 208 63.9
AUR62042202 Chenopodium quinoa HOM05D005284 ORTHO05D006609 1.9e-71 273.5 230 57.8
CBR_g19259 Chara braunii HOM05D005284 ORTHO05D006609 4.6e-70 268.9 269 51.3
ClCG01G025350 Citrullus lanatus HOM05D005284 ORTHO05D006609 3.0e-69 266.2 328 46.6
AUR62033057 Chenopodium quinoa HOM05D005284 ORTHO05D006609 6.2e-67 258.5 189 63.5
MCO11G684 Micromonas commoda HOM05D005284 ORTHO05D006609 6.7e-61 238.4 254 46.9
Cre06.g274400 Chlamydomonas reinhardtii HOM05D005284 ORTHO05D006609 6.3e-59 231.9 253 44.7
Dinv04294 Davidia involucrata HOM05D005284 ORTHO05D006609 1.5e-57 227.3 145 71.7
PRCOL_00002523 Prasinoderma coloniale HOM05D005284 ORTHO05D006609 2.2e-56 223.4 257 42.4
AagrBONN_evm.TU.Sc2ySwM_344.3509 Anthoceros agrestis HOM05D005284 ORTHO05D006609 1.1e-55 221.1 201 55.7
Thecc.06G010000 Theobroma cacao HOM05D005284 ORTHO05D006609 1.7e-48 197.2 196 52.6
Hma1.2p1_0721F.1_g208670 Hydrangea macrophylla HOM05D005284 ORTHO05D006609 2.0e-36 157.1 116 67.2
Hma1.2p1_0721F.1_g208680 Hydrangea macrophylla HOM05D005284 ORTHO05D006609 2.0e-36 157.1 116 67.2
CARHR114890 Cardamine hirsuta HOM05D005284 ORTHO05D006609 1.9e-31 140.6 98 63.3
vmacro21870 Vaccinium macrocarpon HOM05D005284 ORTHO05D006609 3.7e-27 126.3 93 65.6
PGSC0003DMG400009806 Solanum tuberosum HOM05D005284 ORTHO05D006609 8.2e-27 125.2 96 66.7
Haze_05942 Corylus avellana HOM05D005284 ORTHO05D006609 1.7e-24 117.5 95 62.1
Thecc.06G009200 Theobroma cacao HOM05D005284 ORTHO05D006609 1.7e-24 117.5 97 60.8
Aa31LG2G17800 Aethionema arabicum HOM05D005284 ORTHO05D006609 8.5e-24 115.2 84 60.7
Cfa017779 Carpinus fangiana HOM05D005284 ORTHO05D006609 8.5e-24 115.2 99 61.6
Thecc.06G009800 Theobroma cacao HOM05D005284 ORTHO05D006609 9.4e-23 111.7 97 59.8
Thecc.06G009400 Theobroma cacao HOM05D005284 ORTHO05D006609 1.2e-22 111.3 84 63.1
Pp3c22_8670 Physcomitrium patens HOM05D005284 ORTHO05D006609 3.6e-22 109.8 114 50.9
Dinv09223 Davidia involucrata HOM05D005284 ORTHO05D006609 8.0e-22 108.6 96 62.5
Dinv23919 Davidia involucrata HOM05D005284 ORTHO05D006609 8.8e-21 105.1 89 56.2
GSVIVG01037925001 Vitis vinifera HOM05D005284 ORTHO05D006609 4.4e-20 102.8 77 64.9
Lalb_Chr13g0291531 Lupinus albus HOM05D005284 ORTHO05D006609 3.1e-18 96.7 99 54.5
CSS0000752 Camellia sinensis var. sinensis HOM05D005284 ORTHO05D006609 4.1e-18 96.3 52 78.8
PGSC0003DMG400015105 Solanum tuberosum HOM05D005284 ORTHO05D006609 4.1e-18 96.3 54 70.4
Sabra16G0312400 Salix brachista HOM05D005284 ORTHO05D006609 5.4e-18 95.9 58 72.4
BcaB07g30524 Brassica carinata HOM05D005284 ORTHO05D006609 3.8e-16 89.7 64 64.1
Nitab4.5_0000637g0040 Nicotiana tabacum HOM05D005284 ORTHO05D006609 1.0e-13 81.6 57 66.7
Nitab4.5_0001154g0100 Nicotiana tabacum HOM05D005284 ORTHO05D006609 3.0e-13 80.1 60 65.0
CSS0004293 Camellia sinensis var. sinensis HOM05D005284 ORTHO05D006609 1.7e-11 74.3 38 76.3
Glyma.04G136150 Glycine max HOM05D005284 ORTHO05D006609 7.0e-10 68.9 35 77.1
Prupe.4G100800 Prunus persica HOM05D005284 ORTHO05D006609 5.9e-09 65.9 55 52.7
Migut.D00154 Erythranthe guttata HOM05D005284 ORTHO05D006609 2.3e-08 63.9 83 47.0


User provided reference genes

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