Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G01498 Aquilegia oxysepala HOM05D002733 ORTHO05D003856 1.1e-95 353.2 174 100.0
Aqoxy1G01499 Aquilegia oxysepala HOM05D002733 ORTHO05D003856 3.4e-31 139.0 180 46.7
FAN23G1126 Fragaria x ananassa HOM05D002733 ORTHO05D003856 1.3e-19 100.5 128 41.4
FvH4_1g24261 Fragaria vesca HOM05D002733 ORTHO05D003856 2.3e-19 99.8 128 41.4
FAN26G1179 Fragaria x ananassa HOM05D002733 ORTHO05D003856 2.3e-19 99.8 128 41.4
FAN28G1642 Fragaria x ananassa HOM05D000949 ORTHO05D001276 2.9e-19 99.4 128 41.4
Aqoxy2G03580 Aquilegia oxysepala HOM05D002733 ORTHO05D003856 2.5e-18 96.3 167 39.5
COL.COLO4_34789 Corchorus olitorius HOM05D002733 ORTHO05D003856 1.2e-17 94.0 126 42.1
MD15G1316300 Malus domestica HOM05D002733 ORTHO05D003856 1.2e-17 94.0 125 41.6
Gohir.D06G064250 Gossypium hirsutum HOM05D002733 ORTHO05D003856 1.6e-17 93.6 148 38.5
Gorai.010G075000 Gossypium raimondii HOM05D002733 ORTHO05D003856 1.6e-17 93.6 148 38.5
MD00G1107900 Malus domestica HOM05D002733 ORTHO05D003856 2.8e-17 92.8 125 41.6
Prupe.7G223900 Prunus persica HOM05D002733 ORTHO05D003856 2.8e-17 92.8 127 38.6
CAN.G1774.3 Capsicum annuum HOM05D002733 ORTHO05D003856 6.1e-17 91.7 133 37.6
MD02G1059300 Malus domestica HOM05D002733 ORTHO05D003856 6.1e-17 91.7 125 40.0
RcHm_v2.0_Chr7g0192641 Rosa chinensis HOM05D002733 ORTHO05D003856 6.1e-17 91.7 125 40.0
Ciclev10007038m.g Citrus clementina HOM05D002733 ORTHO05D003856 8.0e-17 91.3 128 38.3
Sed0022151 Sechium edule HOM05D002733 ORTHO05D003856 8.0e-17 91.3 114 40.4
Thecc.09G104200 Theobroma cacao HOM05D002733 ORTHO05D003856 1.8e-16 90.1 126 42.1
Lj1g0000886 Lotus japonicus HOM05D002733 ORTHO05D003856 2.3e-16 89.7 123 38.2
Thecc.07G171000 Theobroma cacao HOM05D002733 ORTHO05D003856 5.2e-16 88.6 126 39.7
Gohir.A06G065650 Gossypium hirsutum HOM05D002733 ORTHO05D003856 6.8e-16 88.2 148 36.5
Hma1.2p1_1080F.1_g255020 Hydrangea macrophylla HOM05D002733 ORTHO05D003856 8.9e-16 87.8 124 38.7
Manes.03G176000 Manihot esculenta HOM05D002733 ORTHO05D003856 8.9e-16 87.8 126 38.1
Manes.03G176200 Manihot esculenta HOM05D002733 ORTHO05D003856 1.2e-15 87.4 126 38.1
Duzib168G2229 Durio zibethinus HOM05D002733 ORTHO05D003856 3.4e-15 85.9 185 33.0
COL.COLO4_32232 Corchorus olitorius HOM05D002733 ORTHO05D003856 4.4e-15 85.5 143 36.4
Eucgr.L02178 Eucalyptus grandis HOM05D002733 ORTHO05D003856 5.8e-15 85.1 150 34.7
VMungo1080G0152 Vigna mungo HOM05D002733 ORTHO05D003856 5.8e-15 85.1 104 41.3
CiPaw.03G015000 Carya illinoinensis HOM05D002733 ORTHO05D003856 1.3e-14 84.0 127 40.2
CiPaw.03G014700 Carya illinoinensis HOM05D002733 ORTHO05D003856 1.7e-14 83.6 127 38.6
Actinidia09441 Actinidia chinensis HOM05D002733 ORTHO05D003856 2.2e-14 83.2 132 35.6
PGSC0003DMG400000368 Solanum tuberosum HOM05D002733 ORTHO05D003856 2.2e-14 83.2 127 37.8
Actinidia20408 Actinidia chinensis HOM05D002733 ORTHO05D003856 2.9e-14 82.8 135 37.0
Aa31LG8G17220 Aethionema arabicum HOM05D002733 ORTHO05D003856 2.9e-14 82.8 126 35.7
VMungo1080G0686 Vigna mungo HOM05D002733 ORTHO05D003856 2.9e-14 82.8 104 39.4
CsaV3_3G004840 Cucumis sativus L. HOM05D002733 ORTHO05D003856 4.9e-14 82.0 128 36.7
Lj3g0006952 Lotus japonicus HOM05D002733 ORTHO05D003856 8.3e-14 81.3 127 33.1
Solyc12g007300.1 Solanum lycopersicum HOM05D002733 ORTHO05D003856 1.4e-13 80.5 127 36.2
Sopen12g003260 Solanum pennellii HOM05D002733 ORTHO05D003856 1.4e-13 80.5 127 36.2
CiPaw.03G015300 Carya illinoinensis HOM05D002733 ORTHO05D003856 1.8e-13 80.1 127 39.4
Duzib213G1035 Durio zibethinus HOM05D002733 ORTHO05D003856 1.8e-13 80.1 130 36.9
Eucgr.C01014 Eucalyptus grandis HOM05D002733 ORTHO05D003856 1.8e-13 80.1 112 37.5
Glyma.04G133200 Glycine max HOM05D002733 ORTHO05D003856 2.4e-13 79.7 146 30.8
TPR.G1412 Trifolium pratense HOM05D002733 ORTHO05D003856 2.4e-13 79.7 125 36.0
Cfa016244 Carpinus fangiana HOM05D002733 ORTHO05D003856 4.1e-13 79.0 128 35.2
Phvul.005G031300 Phaseolus vulgaris HOM05D002733 ORTHO05D003856 7.0e-13 78.2 122 32.0
Rhsim05G0042200 Rhododendron simsii HOM05D002733 ORTHO05D003856 7.0e-13 78.2 131 34.4
DCAR_028226 Daucus carota HOM05D002733 ORTHO05D003856 9.2e-13 77.8 134 35.1
Potri.001G397100 Populus trichocarpa HOM05D002733 ORTHO05D003856 9.2e-13 77.8 114 36.8
TPR.G1447 Trifolium pratense HOM05D002733 ORTHO05D003856 1.2e-12 77.4 127 34.6
TPR.G18869 Trifolium pratense HOM05D004715 ORTHO05D005644 1.2e-12 77.4 113 35.4
Aa31LG8G11380 Aethionema arabicum HOM05D002733 ORTHO05D003856 1.6e-12 77.0 128 34.4
Duzib213G0038 Durio zibethinus HOM05D002733 ORTHO05D003856 2.0e-12 76.6 127 36.2
Aa31LG3G6410 Aethionema arabicum HOM05D002733 ORTHO05D003856 4.6e-12 75.5 104 35.6
BcaC02g07356 Brassica carinata HOM05D002733 ORTHO05D003856 4.6e-12 75.5 144 34.7
Sed0027145 Sechium edule HOM05D002733 ORTHO05D003856 6.0e-12 75.1 170 33.5
BolC4t28286H Brassica oleracea HOM05D002733 ORTHO05D003856 1.0e-11 74.3 144 34.7
DCAR_003268 Daucus carota HOM05D002733 ORTHO05D003856 1.0e-11 74.3 124 37.9
Peaxi162Scf00665g00126 Petunia axillaris HOM05D002733 ORTHO05D003856 1.0e-11 74.3 117 37.6
QL02p042807 Quercus lobata HOM05D002733 ORTHO05D003856 1.0e-11 74.3 129 33.3
A04p30010 Brassica napus HOM05D002733 ORTHO05D003856 1.3e-11 73.9 144 33.3
BraA04t18506Z Brassica rapa HOM05D002733 ORTHO05D003856 1.3e-11 73.9 144 33.3
QL02p042555 Quercus lobata HOM05D002733 ORTHO05D003856 1.7e-11 73.6 129 33.3
CiPaw.03G014800 Carya illinoinensis HOM05D002733 ORTHO05D003856 2.3e-11 73.2 130 40.8
Prupe.7G224100 Prunus persica HOM05D002733 ORTHO05D003856 2.3e-11 73.2 155 31.6
Aa31LG8G17140 Aethionema arabicum HOM05D002733 ORTHO05D003856 3.9e-11 72.4 104 34.6
Aa31LG8G17210 Aethionema arabicum HOM05D002733 ORTHO05D003856 3.9e-11 72.4 104 35.6
Medtr0267s0030 Medicago truncatula HOM05D002733 ORTHO05D003856 5.0e-11 72.0 126 31.7
Medtr3g013820 Medicago truncatula HOM05D002733 ORTHO05D003856 5.0e-11 72.0 126 32.5
Medtr3g013900 Medicago truncatula HOM05D002733 ORTHO05D003856 5.0e-11 72.0 126 32.5
Medtr3g013810 Medicago truncatula HOM05D002733 ORTHO05D003856 6.6e-11 71.6 126 32.5
Medtr3g013920 Medicago truncatula HOM05D002733 ORTHO05D003856 6.6e-11 71.6 126 32.5
AL7G49890 Arabidopsis lyrata HOM05D002733 ORTHO05D003856 1.9e-10 70.1 106 40.6
PSO566G0305 Papaver somniferum HOM05D002733 ORTHO05D003856 1.9e-10 70.1 108 32.4
Aa31LG7G1530 Aethionema arabicum HOM05D002733 ORTHO05D003856 2.5e-10 69.7 107 34.6
Aa31LG7G1520 Aethionema arabicum HOM05D002733 ORTHO05D003856 3.3e-10 69.3 104 35.6
AL8G24310 Arabidopsis lyrata HOM05D002733 ORTHO05D003856 3.3e-10 69.3 106 39.6
Sed0017653 Sechium edule HOM05D002733 ORTHO05D003856 3.3e-10 69.3 143 30.1
Sp4g22050 Schrenkiella parvula HOM05D002733 ORTHO05D003856 4.3e-10 68.9 128 38.3
Aqoxy7G01497 Aquilegia oxysepala HOM05D002733 ORTHO05D003856 9.5e-10 67.8 159 34.0
BcaC01g05431 Brassica carinata HOM05D002733 ORTHO05D003856 1.6e-09 67.0 163 35.0
QL01p018928 Quercus lobata HOM05D002733 ORTHO05D003856 1.6e-09 67.0 133 38.3
C03p26740 Brassica napus HOM05D002733 ORTHO05D003856 2.1e-09 66.6 163 35.0
BolC3t15059H Brassica oleracea HOM05D002733 ORTHO05D003856 2.1e-09 66.6 163 35.0
Carub.0003s2754 Capsella rubella HOM05D002733 ORTHO05D003856 2.1e-09 66.6 130 33.8
PSO782G1409 Papaver somniferum HOM05D002733 ORTHO05D003856 2.8e-09 66.2 110 35.5
Aa31LG8G17160 Aethionema arabicum HOM05D002733 ORTHO05D003856 3.6e-09 65.9 107 34.6
MD02G1060300 Malus domestica HOM05D002733 ORTHO05D003856 3.6e-09 65.9 103 36.9
Carub.0004s2232 Capsella rubella HOM05D002733 ORTHO05D003856 1.1e-08 64.3 105 37.1
AT4G03160 Arabidopsis thaliana HOM05D002733 ORTHO05D003856 1.8e-08 63.5 104 37.5
Aa31LG8G17200 Aethionema arabicum HOM05D002733 ORTHO05D003856 2.3e-08 63.2 109 33.9
PGSC0003DMG400000371 Solanum tuberosum HOM05D002733 ORTHO05D003856 1.5e-07 60.5 132 31.1
AT1G20600 Arabidopsis thaliana HOM05D002733 ORTHO05D003856 2.0e-07 60.1 84 41.7
Aa31LG7G1590 Aethionema arabicum HOM05D002733 ORTHO05D003856 3.4e-07 59.3 140 30.0
Aa31LG8G17150 Aethionema arabicum HOM05D002733 ORTHO05D003856 5.8e-07 58.5 140 30.0
AL4G37790 Arabidopsis lyrata HOM05D002733 ORTHO05D003856 5.8e-07 58.5 105 35.2
Aa31LG7G1540 Aethionema arabicum HOM05D002733 ORTHO05D003856 9.8e-07 57.8 107 33.6
Phvul.004G169400 Phaseolus vulgaris HOM05D022012 ORTHO05D003856 9.8e-07 57.8 76 35.5
BraA10t42685Z Brassica rapa HOM05D000896 ORTHO05D000594 1.3e-06 57.4 124 29.8
A10p04160 Brassica napus HOM05D000896 ORTHO05D000594 2.2e-06 56.6 124 29.8
AL1G46070 Arabidopsis lyrata HOM05D000896 ORTHO05D000594 2.9e-06 56.2 124 30.6
BcaC05g24385 Brassica carinata HOM05D000896 ORTHO05D000594 2.9e-06 56.2 126 30.2
C05p03790 Brassica napus HOM05D000896 ORTHO05D000594 2.9e-06 56.2 126 30.2
BolC5t29156H Brassica oleracea HOM05D000896 ORTHO05D000594 2.9e-06 56.2 126 30.2
Phvul.004G029250 Phaseolus vulgaris HOM05D022012 ORTHO05D003856 6.4e-06 55.1 76 35.5


User provided reference genes

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