Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G01487 Aquilegia oxysepala HOM05D004305 ORTHO05D005159 6.4e-217 757.3 430 100.0
BraA03t14328Z Brassica rapa HOM05D004305 ORTHO05D005159 3.5e-13 80.5 429 29.4
A03p52530 Brassica napus HOM05D004305 ORTHO05D005159 2.3e-12 77.8 425 30.8
PSO675G0053 Papaver somniferum HOM05D004305 ORTHO05D005159 3.9e-12 77.0 500 26.4
PGR083G0011 Punica granatum HOM05D004305 ORTHO05D005159 1.6e-10 71.6 77 57.1
Thecc.06G003200 Theobroma cacao HOM05D004305 ORTHO05D005159 1.6e-10 71.6 458 27.5
Rhsim02G0163100 Rhododendron simsii HOM05D004305 ORTHO05D005159 2.8e-10 70.9 224 36.6
BolC7t45599H Brassica oleracea HOM05D004305 ORTHO05D005159 8.1e-10 69.3 432 28.9
C07p50970 Brassica napus HOM05D004305 ORTHO05D005159 1.8e-09 68.2 424 30.9
Ciclev10015182m.g Citrus clementina HOM05D004305 ORTHO05D005159 3.1e-09 67.4 488 28.1
Nn1g07139 Nelumbo nucifera HOM05D004305 ORTHO05D005159 3.1e-09 67.4 58 67.2
Prupe.4G095400 Prunus persica HOM05D004305 ORTHO05D005159 3.1e-09 67.4 192 32.3
GSVIVG01021709001 Vitis vinifera HOM05D004305 ORTHO05D005159 3.1e-09 67.4 187 34.2
Cfa000806 Carpinus fangiana HOM05D004305 ORTHO05D005159 4.0e-09 67.0 449 26.9
BcaNung05413 Brassica carinata HOM05D004305 ORTHO05D005159 5.2e-09 66.6 423 31.0
Sp7g18970 Schrenkiella parvula HOM05D004305 ORTHO05D005159 5.2e-09 66.6 58 63.8
CARHR178780 Cardamine hirsuta HOM05D004305 ORTHO05D005159 8.9e-09 65.9 60 60.0
CANSAT35G0942 Cannabis sativa HOM05D004305 ORTHO05D005159 1.5e-08 65.1 480 27.5
Nn1g03508 Nelumbo nucifera HOM05D004305 ORTHO05D005159 1.5e-08 65.1 459 25.1
BcaC06g34566 Brassica carinata HOM05D004305 ORTHO05D005159 2.0e-08 64.7 121 38.0
C07p27080 Brassica napus HOM05D004305 ORTHO05D005159 2.0e-08 64.7 121 38.0
COL.COLO4_26846 Corchorus olitorius HOM05D004305 ORTHO05D005159 3.4e-08 63.9 58 60.3
Psat1g165840 Pisum sativum HOM05D004305 ORTHO05D005159 3.4e-08 63.9 445 25.6
Atru.chr10.781 Acer truncatum HOM05D004305 ORTHO05D005159 4.4e-08 63.5 430 26.0
Duzib235G0167 Durio zibethinus HOM05D004305 ORTHO05D005159 4.4e-08 63.5 424 26.9
Sp2g09190 Schrenkiella parvula HOM05D004305 ORTHO05D005159 4.4e-08 63.5 57 64.9
EL10Ac4g07786 Beta vulgaris HOM05D023924 ORTHO05D023401 7.6e-08 62.8 135 39.3
Gorai.010G144500 Gossypium raimondii HOM05D004305 ORTHO05D005159 1.3e-07 62.0 414 25.6
AUR62014849 Chenopodium quinoa HOM05D002349 ORTHO05D002464 1.7e-07 61.6 81 48.1
FAN16G1832 Fragaria x ananassa HOM05D004305 ORTHO05D005159 1.7e-07 61.6 454 26.9
QL05p063597 Quercus lobata HOM05D004305 ORTHO05D005159 1.7e-07 61.6 452 25.9
QL93p0201_0023 Quercus lobata HOM05D004305 ORTHO05D005159 1.7e-07 61.6 452 25.9
A02p28380 Brassica napus HOM05D004305 ORTHO05D005159 2.2e-07 61.2 268 28.0
Oeu015165.2 Olea europaea HOM05D004305 ORTHO05D005159 2.9e-07 60.8 59 59.3
Actinidia32347 Actinidia chinensis HOM05D004305 ORTHO05D005159 3.7e-07 60.5 100 44.0
Gohir.D06G124500 Gossypium hirsutum HOM05D004305 ORTHO05D005159 3.7e-07 60.5 414 25.1
FAN11G3528 Fragaria x ananassa HOM05D004305 ORTHO05D005159 4.9e-07 60.1 453 28.7
MD05G1269300 Malus domestica HOM05D004305 ORTHO05D005159 4.9e-07 60.1 57 61.4
Ah.04g165990 Amaranthus hybridus HOM05D023924 ORTHO05D023401 8.4e-07 59.3 153 33.3
BcaB03g11678 Brassica carinata HOM05D004305 ORTHO05D005159 8.4e-07 59.3 443 27.8
BcaC03g16656 Brassica carinata HOM05D004305 ORTHO05D005159 8.4e-07 59.3 58 58.6
BraA06t27598Z Brassica rapa HOM05D004305 ORTHO05D005159 8.4e-07 59.3 115 37.4
Carub.0008s0412 Capsella rubella HOM05D004305 ORTHO05D005159 8.4e-07 59.3 60 50.0
BcaNung07356 Brassica carinata HOM05D004305 ORTHO05D005159 1.1e-06 58.9 440 30.7
unitig_32.g10874 Utricularia gibba HOM05D004305 ORTHO05D005159 1.1e-06 58.9 67 52.2
BcaC06g31624 Brassica carinata HOM05D004305 ORTHO05D005159 1.4e-06 58.5 300 26.7
BraA02t07875Z Brassica rapa HOM05D004305 ORTHO05D005159 1.4e-06 58.5 269 27.5
SHI24805 Sapria himalayana HOM05D004305 ORTHO05D005159 1.4e-06 58.5 149 32.9
A01p12300 Brassica napus HOM05D004305 ORTHO05D005159 1.9e-06 58.2 439 29.8
BolC7t43238H Brassica oleracea HOM05D004305 ORTHO05D005159 1.9e-06 58.2 268 28.7
FvH4_3g10700 Fragaria vesca HOM05D004305 ORTHO05D005159 1.9e-06 58.2 445 28.5
Manes.14G124700 Manihot esculenta HOM05D004305 ORTHO05D005159 1.9e-06 58.2 483 25.9
Migut.M01906 Erythranthe guttata HOM05D004305 ORTHO05D005159 2.4e-06 57.8 480 26.9
Sc03g0008520 Simmondsia chinensis HOM05D004305 ORTHO05D005159 2.4e-06 57.8 59 55.9
THA.LOC104812214 Tarenaya hassleriana HOM05D004305 ORTHO05D005159 3.2e-06 57.4 53 62.3
A09p21070 Brassica napus HOM05D004305 ORTHO05D005159 4.1e-06 57.0 84 44.0
BraA09t37708Z Brassica rapa HOM05D004305 ORTHO05D005159 4.1e-06 57.0 84 44.0
Dinv06927 Davidia involucrata HOM05D004305 ORTHO05D005159 4.1e-06 57.0 214 32.7
Gohir.A06G119900 Gossypium hirsutum HOM05D004305 ORTHO05D005159 4.1e-06 57.0 346 25.7
Glyma.09G026200 Glycine max HOM05D004305 ORTHO05D005159 5.4e-06 56.6 58 55.2
CDE02G2479 Ceratophyllum demersum HOM05D006189 ORTHO05D007765 7.1e-06 56.2 135 34.8
Lalb_Chr18g0058121 Lupinus albus HOM05D004305 ORTHO05D005159 7.1e-06 56.2 439 25.3
BcaB07g30530 Brassica carinata HOM05D004305 ORTHO05D005159 9.2e-06 55.8 193 29.5
FAN21G2878 Fragaria x ananassa HOM05D004305 ORTHO05D005159 9.2e-06 55.8 426 27.9
MBI02_g39880_MAGBIO Magnolia biondii HOM05D004305 ORTHO05D005159 9.2e-06 55.8 188 29.3


User provided reference genes

Program Settings