Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G01484 Aquilegia oxysepala HOM05D003670 ORTHO05D004767 3.1e-215 751.5 374 100.0
PSO675G6901 Papaver somniferum HOM05D003670 ORTHO05D004767 9.1e-167 590.5 376 76.3
PSO541G1524 Papaver somniferum HOM05D003670 ORTHO05D004767 1.7e-165 586.3 376 76.1
TAR583G0001 Trochodendron aralioides HOM05D003670 ORTHO05D004767 1.4e-164 583.2 372 75.8
Lsat_1_v5_gn_7_110680 Lactuca sativa HOM05D003670 ORTHO05D004767 1.0e-162 577.0 375 76.5
CSS0006756 Camellia sinensis var. sinensis HOM05D003670 ORTHO05D004767 2.3e-162 575.9 377 74.0
MBI02_g18168_MAGBIO Magnolia biondii HOM05D003670 ORTHO05D004767 3.0e-162 575.5 374 75.1
GSVIVG01036786001 Vitis vinifera HOM05D003670 ORTHO05D004767 1.7e-160 569.7 377 73.7
Nitab4.5_0006241g0010 Nicotiana tabacum HOM05D003670 ORTHO05D004767 3.7e-160 568.5 375 74.1
TWI39G0091 Tripterygium wilfordii HOM05D003670 ORTHO05D004767 1.1e-159 567.0 377 74.8
Hma1.2p1_0151F.1_g067325 Hydrangea macrophylla HOM05D003670 ORTHO05D004767 1.4e-159 566.6 377 74.8
Manes.14G010300 Manihot esculenta HOM05D003670 ORTHO05D004767 1.4e-159 566.6 375 74.1
Potri.007G069300 Populus trichocarpa HOM05D003670 ORTHO05D004767 2.4e-159 565.8 376 73.7
Manes.06G175700 Manihot esculenta HOM05D003670 ORTHO05D004767 3.1e-159 565.5 378 73.5
HanXRQChr11g0335601 Helianthus annuus HOM05D003670 ORTHO05D004767 4.1e-159 565.1 375 75.7
PGSC0003DMG400022232 Solanum tuberosum HOM05D003670 ORTHO05D004767 2.0e-158 562.8 375 74.7
Ciclev10005196m.g Citrus clementina HOM05D003670 ORTHO05D004767 2.6e-158 562.4 376 73.9
Migut.H01671 Erythranthe guttata HOM05D003670 ORTHO05D004767 7.7e-158 560.8 371 73.6
TWI38G1711 Tripterygium wilfordii HOM05D003670 ORTHO05D004767 7.7e-158 560.8 377 74.8
FvH4_3g14990 Fragaria vesca HOM05D003670 ORTHO05D004767 1.0e-157 560.5 377 73.2
Rhsim06G0242300 Rhododendron simsii HOM05D003670 ORTHO05D004767 1.0e-157 560.5 400 69.8
FAN11G2825 Fragaria x ananassa HOM05D003670 ORTHO05D004767 1.7e-157 559.7 377 73.2
Sopen07g034740 Solanum pennellii HOM05D003670 ORTHO05D004767 1.7e-157 559.7 374 74.1
CiPaw.11G061900 Carya illinoinensis HOM05D003670 ORTHO05D004767 2.9e-157 558.9 377 73.2
MD05G1228000 Malus domestica HOM05D003670 ORTHO05D004767 2.9e-157 558.9 377 73.5
Peaxi162Scf00452g00333 Petunia axillaris HOM05D003670 ORTHO05D004767 2.9e-157 558.9 377 72.7
Prupe.4G134300 Prunus persica HOM05D003670 ORTHO05D004767 3.8e-157 558.5 378 72.5
FAN21G1395 Fragaria x ananassa HOM05D003670 ORTHO05D004767 6.5e-157 557.8 377 72.9
ECA236G3562 Erigeron canadensis HOM05D003670 ORTHO05D004767 1.9e-156 556.2 311 83.9
Solyc07g066580.3 Solanum lycopersicum HOM05D003670 ORTHO05D004767 4.2e-156 555.1 373 73.7
Nitab4.5_0000029g0340 Nicotiana tabacum HOM05D003670 ORTHO05D004767 5.5e-156 554.7 375 73.1
Gohir.A13G123400 Gossypium hirsutum HOM05D003670 ORTHO05D004767 7.2e-156 554.3 377 72.9
Nn7g37780 Nelumbo nucifera HOM05D003670 ORTHO05D004767 7.2e-156 554.3 343 77.6
Nitab4.5_0005765g0040 Nicotiana tabacum HOM05D003670 ORTHO05D004767 7.2e-156 554.3 379 74.1
Gohir.D13G127300 Gossypium hirsutum HOM05D003670 ORTHO05D004767 1.0e-154 550.4 377 72.4
CAN.G943.51 Capsicum annuum HOM05D003670 ORTHO05D004767 1.4e-154 550.1 377 72.1
RcHm_v2.0_Chr5g0024611 Rosa chinensis HOM05D003670 ORTHO05D004767 1.4e-154 550.1 377 72.4
QL04p088520 Quercus lobata HOM05D003670 ORTHO05D004767 2.3e-154 549.3 402 68.2
Thecc.07G180400 Theobroma cacao HOM05D003670 ORTHO05D004767 2.3e-154 549.3 377 71.9
Lj3g0014239 Lotus japonicus HOM05D003670 ORTHO05D004767 3.0e-154 548.9 377 71.6
Gorai.013G142500 Gossypium raimondii HOM05D003670 ORTHO05D004767 3.9e-154 548.5 378 72.5
Peaxi162Scf00006g00159 Petunia axillaris HOM05D003670 ORTHO05D004767 3.9e-154 548.5 376 71.5
Cc05_g16310 Coffea canephora HOM05D003670 ORTHO05D004767 5.2e-154 548.1 379 70.7
FAN25G1710 Fragaria x ananassa HOM05D003670 ORTHO05D004767 5.2e-154 548.1 391 69.8
Lalb_Chr25g0284691 Lupinus albus HOM05D003670 ORTHO05D004767 5.7e-153 544.7 378 70.9
MD10G1208500 Malus domestica HOM05D003670 ORTHO05D004767 7.4e-153 544.3 377 72.1
COL.COLO4_32264 Corchorus olitorius HOM05D003670 ORTHO05D004767 2.2e-152 542.7 307 81.1
Psat1g013760 Pisum sativum HOM05D003670 ORTHO05D004767 2.8e-152 542.3 375 70.4
PGR031G1669 Punica granatum HOM05D003670 ORTHO05D004767 2.8e-152 542.3 380 70.5
ATR0763G120 Amborella trichopoda HOM05D003670 ORTHO05D004767 6.3e-152 541.2 379 71.5
TPR.G33813 Trifolium pratense HOM05D003670 ORTHO05D004767 8.2e-152 540.8 376 69.7
Medtr2g067080 Medicago truncatula HOM05D003670 ORTHO05D004767 1.1e-151 540.4 378 71.4
Glyma.08G167100 Glycine max HOM05D003670 ORTHO05D004767 1.4e-151 540.0 380 70.3
Phvul.005G050400 Phaseolus vulgaris HOM05D003670 ORTHO05D004767 9.1e-151 537.3 381 70.3
VMungo1080G1660 Vigna mungo HOM05D003670 ORTHO05D004767 1.2e-150 537.0 363 72.7
CARHR016930 Cardamine hirsuta HOM05D003670 ORTHO05D004767 5.9e-150 534.6 378 68.0
Oeu002796.1 Olea europaea HOM05D003670 ORTHO05D004767 1.0e-149 533.9 333 75.4
CANSAT80G2697 Cannabis sativa HOM05D003670 ORTHO05D004767 1.3e-149 533.5 381 69.3
Ca_03600_v3 Cicer arietinum L. HOM05D003670 ORTHO05D004767 1.7e-149 533.1 376 70.2
Duzib187G0441 Durio zibethinus HOM05D003670 ORTHO05D004767 2.9e-149 532.3 307 79.8
Sabra07G0056700 Salix brachista HOM05D003670 ORTHO05D004767 5.0e-149 531.6 394 68.0
Eucgr.F04458 Eucalyptus grandis HOM05D003670 ORTHO05D004767 6.5e-149 531.2 377 69.2
MSTRG.14566 Avicennia marina HOM05D003670 ORTHO05D004767 8.5e-149 530.8 380 70.5
AUR62037644 Chenopodium quinoa HOM05D003670 ORTHO05D004767 1.1e-148 530.4 379 68.6
CsaV3_3G018980 Cucumis sativus L. HOM05D003670 ORTHO05D004767 1.1e-148 530.4 376 68.6
HPP92_013192 Vanilla planifolia HOM05D003670 ORTHO05D004767 1.9e-148 529.6 377 67.9
Carub.0001s1620 Capsella rubella HOM05D003670 ORTHO05D004767 3.2e-148 528.9 377 68.2
Ah.10g033690 Amaranthus hybridus HOM05D003670 ORTHO05D004767 9.4e-148 527.3 399 66.2
AUR62039184 Chenopodium quinoa HOM05D003670 ORTHO05D004767 1.2e-147 526.9 379 68.1
AL2G39700 Arabidopsis lyrata HOM05D003670 ORTHO05D004767 1.6e-147 526.6 374 67.9
Aa31LG4G1790 Aethionema arabicum HOM05D003670 ORTHO05D004767 2.1e-147 526.2 358 69.8
Thhalv10018699m.g Eutrema salsugineum HOM05D003670 ORTHO05D004767 1.0e-146 523.9 377 67.4
BolC5t30186H Brassica oleracea HOM05D003670 ORTHO05D004767 2.3e-146 522.7 375 67.2
Sed0012107 Sechium edule HOM05D003670 ORTHO05D004767 4.0e-146 521.9 376 67.3
BcaC05g25571 Brassica carinata HOM05D003670 ORTHO05D004767 1.5e-145 520.0 375 66.9
C05p14650 Brassica napus HOM05D003670 ORTHO05D004767 2.0e-145 519.6 375 66.9
EL10Ac2g03264 Beta vulgaris HOM05D003670 ORTHO05D004767 2.6e-145 519.2 380 67.4
Sp5g34280 Schrenkiella parvula HOM05D003670 ORTHO05D004767 2.6e-145 519.2 374 67.4
CARHR072860 Cardamine hirsuta HOM05D003670 ORTHO05D004767 4.4e-145 518.5 306 76.5
Solyc02g078990.4 Solanum lycopersicum HOM05D003670 ORTHO05D004767 5.7e-145 518.1 320 75.6
vmacro11699 Vaccinium macrocarpon HOM05D003670 ORTHO05D004767 9.7e-145 517.3 363 68.9
AT1G79230 Arabidopsis thaliana HOM05D003670 ORTHO05D004767 1.3e-144 516.9 374 67.1
BcaB02g07206 Brassica carinata HOM05D003670 ORTHO05D004767 1.7e-144 516.5 309 75.7
Zm00001eb031400 Zea mays HOM05D003670 ORTHO05D004767 1.7e-144 516.5 341 72.4
Sopen02g023800 Solanum pennellii HOM05D003670 ORTHO05D004767 2.2e-144 516.2 311 77.5
BraA07t31943Z Brassica rapa HOM05D003670 ORTHO05D004767 2.8e-144 515.8 372 67.7
BcaC08g45368 Brassica carinata HOM05D003670 ORTHO05D004767 6.3e-144 514.6 326 73.3
C06p30000 Brassica napus HOM05D003670 ORTHO05D004767 6.3e-144 514.6 326 73.3
BolC6t38160H Brassica oleracea HOM05D003670 ORTHO05D004767 6.3e-144 514.6 326 73.3
Potri.005G095300 Populus trichocarpa HOM05D003670 ORTHO05D004767 8.2e-144 514.2 297 79.8
Cfa022976 Carpinus fangiana HOM05D003670 ORTHO05D004767 1.1e-143 513.8 377 68.2
THA.LOC104813608 Tarenaya hassleriana HOM05D003670 ORTHO05D004767 1.1e-143 513.8 373 66.0
A07p44350 Brassica napus HOM05D003670 ORTHO05D004767 2.4e-143 512.7 371 67.1
Carub.0002s2610 Capsella rubella HOM05D003670 ORTHO05D004767 5.3e-143 511.5 378 66.7
Os12g0608600 Oryza sativa ssp. japonica HOM05D003670 ORTHO05D004767 1.2e-142 510.4 325 74.2
A07p27230 Brassica napus HOM05D003670 ORTHO05D004767 2.0e-142 509.6 375 65.9
BraA07t30367Z Brassica rapa HOM05D003670 ORTHO05D004767 2.0e-142 509.6 375 65.9
Thhalv10007910m.g Eutrema salsugineum HOM05D003670 ORTHO05D004767 3.5e-142 508.8 315 74.6
BcaB05g25180 Brassica carinata HOM05D003670 ORTHO05D004767 4.5e-142 508.4 314 75.2
unitig_578.g16333 Utricularia gibba HOM05D003670 ORTHO05D004767 4.5e-142 508.4 309 74.4
BraA06t24401Z Brassica rapa HOM05D003670 ORTHO05D004767 2.2e-141 506.1 375 66.4
THA.LOC104812362 Tarenaya hassleriana HOM05D003670 ORTHO05D004767 3.8e-141 505.4 378 65.6
A06p12380 Brassica napus HOM05D003670 ORTHO05D004767 1.1e-140 503.8 374 64.7
BcaB02g06624 Brassica carinata HOM05D003670 ORTHO05D004767 1.5e-140 503.4 357 67.2
Sabra05G0078800 Salix brachista HOM05D003670 ORTHO05D004767 2.7e-139 499.2 339 70.8
SGA_v2.0_scaffold186G40197 Striga asiatica HOM05D003670 ORTHO05D004767 4.7e-139 498.4 304 74.0
Hund20101 Selenicereus undatus HOM05D003670 ORTHO05D004767 1.8e-138 496.5 376 66.5
AL1G28600 Arabidopsis lyrata HOM05D003670 ORTHO05D004767 2.3e-138 496.1 308 73.7
DCAR_019919 Daucus carota HOM05D003670 ORTHO05D004767 3.0e-138 495.7 375 66.7
Sp1g14610 Schrenkiella parvula HOM05D003670 ORTHO05D004767 1.4e-135 486.9 311 71.4
Oeu043724.2 Olea europaea HOM05D003670 ORTHO05D004767 7.0e-135 484.6 322 70.5
Glyma.15G260300 Glycine max HOM05D003670 ORTHO05D004767 1.6e-134 483.4 349 69.3
MSTRG.7076 Avicennia marina HOM05D003670 ORTHO05D004767 2.0e-134 483.0 322 69.6
Duzib213G1009 Durio zibethinus HOM05D003670 ORTHO05D004767 2.0e-134 483.0 382 64.9
Aa31LG7G1000 Aethionema arabicum HOM05D003670 ORTHO05D004767 3.5e-134 482.3 312 70.2
AT1G16460 Arabidopsis thaliana HOM05D003670 ORTHO05D004767 3.5e-134 482.3 313 71.2
arahy.Tifrunner.gnm1.ann1.36F1KB Arachis hypogaea HOM05D003670 ORTHO05D004767 6.6e-133 478.0 348 69.5
Sc06g0002800 Simmondsia chinensis HOM05D003670 ORTHO05D004767 6.6e-133 478.0 301 75.7
ClCG05G009800 Citrullus lanatus HOM05D003670 ORTHO05D000003 7.2e-132 474.6 377 63.1
SEGI_21826 Sequoiadendron giganteum HOM05D003670 ORTHO05D004767 1.5e-129 466.8 319 67.7
unitig_8.g4750 Utricularia gibba HOM05D003670 ORTHO05D004767 2.0e-129 466.5 373 63.5
arahy.Tifrunner.gnm1.ann1.YZ7E83 Arachis hypogaea HOM05D003670 ORTHO05D004767 8.3e-128 461.1 348 68.4
Nitab4.5_0000388g0140 Nicotiana tabacum HOM05D003670 ORTHO05D004767 1.6e-126 456.8 325 72.0
DCAR_016837 Daucus carota HOM05D003670 ORTHO05D004767 2.7e-126 456.1 298 69.8
Lj2A15G76 Lonicera japonica HOM05D003670 ORTHO05D004767 2.7e-126 456.1 347 67.7
C06p53140 Brassica napus HOM05D003670 ORTHO05D004767 7.3e-124 448.0 290 71.0
BolC6t40330H Brassica oleracea HOM05D003670 ORTHO05D004767 4.0e-122 442.2 292 70.5
Os02g0167100 Oryza sativa ssp. japonica HOM05D003670 ORTHO05D004767 2.9e-120 436.0 293 65.2
MELO3C019489.2 Cucumis melo HOM05D003670 ORTHO05D004767 4.6e-118 428.7 323 65.3
BcaC08g47490 Brassica carinata HOM05D003670 ORTHO05D004767 1.7e-117 426.8 375 59.5
Mapoly0058s0078 Marchantia polymorpha HOM05D003670 ORTHO05D004767 8.6e-117 424.5 303 64.0
AagrBONN_evm.TU.Sc2ySwM_344.5346 Anthoceros agrestis HOM05D003670 ORTHO05D004767 1.9e-116 423.3 333 61.0
QL04p088965 Quercus lobata HOM05D003670 ORTHO05D004767 1.9e-116 423.3 241 82.2
SGA_v2.0_scaffold49G18190 Striga asiatica HOM05D003670 ORTHO05D004767 1.9e-111 406.8 277 70.4
Pp3c9_17670 Physcomitrium patens HOM05D003670 ORTHO05D004767 2.1e-110 403.3 332 58.1
Haze_07818 Corylus avellana HOM05D003670 ORTHO05D004767 8.6e-109 397.9 323 64.7
Zm00001eb207410 Zea mays HOM05D003670 ORTHO05D004767 1.1e-108 397.5 326 57.1
HPP92_013209 Vanilla planifolia HOM05D003670 ORTHO05D004767 4.3e-108 395.6 377 55.4
CDE06G2006 Ceratophyllum demersum HOM05D003670 ORTHO05D004767 2.2e-104 383.3 233 75.5
Dinv19592 Davidia involucrata HOM05D003670 ORTHO05D004767 3.7e-104 382.5 289 68.2
Rhsim05G0210500 Rhododendron simsii HOM05D003670 ORTHO05D004767 2.8e-99 366.3 240 72.1
SMO119G0061 Selaginella moellendorffii HOM05D003670 ORTHO05D004767 1.8e-98 363.6 296 58.4
Actinidia12766 Actinidia chinensis HOM05D003670 ORTHO05D004767 9.6e-92 341.3 231 74.0
CDE02G0962 Ceratophyllum demersum HOM05D003670 ORTHO05D004767 2.1e-91 340.1 233 69.5
MD05G1228700 Malus domestica HOM05D003670 ORTHO05D004767 1.5e-89 334.0 196 79.1
FAN16G2550 Fragaria x ananassa HOM05D003670 ORTHO05D004767 5.8e-89 332.0 196 78.6
Cpa.g.sc34.17 Carica papaya HOM05D003670 ORTHO05D004767 1.2e-81 307.8 217 67.7
RcHm_v2.0_Chr5g0024731 Rosa chinensis HOM05D003670 ORTHO05D004767 8.4e-72 275.0 202 70.3
CBR_g17038 Chara braunii HOM05D003670 ORTHO05D004767 7.1e-71 271.9 358 41.6
A02p22680 Brassica napus HOM05D003670 ORTHO05D004767 2.1e-70 270.4 374 42.8
PRCOL_00006295 Prasinoderma coloniale HOM05D003670 ORTHO05D004767 2.8e-67 260.0 306 46.4
Cre13.g607050 Chlamydomonas reinhardtii HOM05D003670 ORTHO05D004767 3.7e-67 259.6 330 42.7
C02p36310 Brassica napus HOM05D003670 ORTHO05D004767 4.8e-67 259.2 219 60.7
MCO09G588 Micromonas commoda HOM05D003670 ORTHO05D004767 2.9e-64 250.0 299 45.8
Aqoxy1G03000 Aquilegia oxysepala HOM05D003670 ORTHO05D004767 2.7e-62 243.4 121 95.0
Hma1.2p1_0269F.1_g107810 Hydrangea macrophylla HOM05D003670 ORTHO05D004767 3.4e-49 199.9 153 65.4
Cfa026738 Carpinus fangiana HOM05D003670 ORTHO05D004767 8.8e-45 185.3 334 37.7
MD05G1228600 Malus domestica HOM05D003670 ORTHO05D004767 1.5e-41 174.5 181 56.9
BolC1t01654H Brassica oleracea HOM05D003670 ORTHO05D004767 4.1e-34 149.8 132 59.1
C03p82980 Brassica napus HOM05D003670 ORTHO05D004767 5.3e-34 149.4 95 74.7
CAN.G891.1 Capsicum annuum HOM05D003670 ORTHO05D004767 5.3e-34 149.4 94 76.6
BcaC01g00674 Brassica carinata HOM05D003670 ORTHO05D004767 1.6e-33 147.9 92 76.1
C01p17180 Brassica napus HOM05D003670 ORTHO05D004767 1.3e-32 144.8 132 57.6
BcaC04g18607 Brassica carinata HOM05D003670 ORTHO05D004767 1.7e-32 144.4 92 73.9
BolC9t58925H Brassica oleracea HOM05D003670 ORTHO05D004767 1.1e-31 141.7 132 56.1
Cpa.g.sc34.16 Carica papaya HOM05D003670 ORTHO05D004767 2.3e-29 134.0 75 80.0
Oeu010650.2 Olea europaea HOM05D003670 ORTHO05D004767 2.3e-29 134.0 102 65.7
Mapoly0032s0014 Marchantia polymorpha HOM05D003670 ORTHO05D031137 3.7e-27 126.7 336 27.7
Lsat_1_v5_gn_4_93521 Lactuca sativa HOM05D003670 ORTHO05D004767 3.1e-26 123.6 66 83.3
Oeu034061.1 Olea europaea HOM05D003670 ORTHO05D020012 9.1e-26 122.1 74 75.7
CDE06G0877 Ceratophyllum demersum HOM05D003670 ORTHO05D004767 7.2e-23 112.5 71 73.2
BolC7t42971H Brassica oleracea HOM05D003670 ORTHO05D004767 6.8e-21 105.9 134 45.5
BcaC06g34801 Brassica carinata HOM05D003670 ORTHO05D004767 3.4e-20 103.6 92 58.7
Solyc06g009850.3 Solanum lycopersicum HOM05D003670 ORTHO05D014971 3.7e-19 100.1 116 50.9
BcaC03g15876 Brassica carinata HOM05D003670 ORTHO05D020012 1.8e-18 97.8 61 77.0
AagrBONN_evm.TU.Sc2ySwM_117.2139 Anthoceros agrestis HOM05D003670 ORTHO05D031137 1.1e-15 88.6 247 29.1
BcaC05g28269 Brassica carinata HOM05D003670 ORTHO05D014971 6.1e-14 82.8 107 45.8
QL04p088979 Quercus lobata HOM05D003670 ORTHO05D004767 1.1e-10 72.0 99 45.5
Sopen06g004510 Solanum pennellii HOM05D003670 ORTHO05D014971 1.1e-10 72.0 45 71.1
BcaC02g07679 Brassica carinata HOM05D003670 ORTHO05D014971 1.4e-10 71.6 41 78.0
Solyc06g009860.1 Solanum lycopersicum HOM05D003670 ORTHO05D020012 2.7e-09 67.4 46 65.2
C06p40160 Brassica napus HOM05D003670 ORTHO05D020012 8.6e-08 62.4 42 66.7
BolC6t39098H Brassica oleracea HOM05D003670 ORTHO05D020012 8.6e-08 62.4 42 66.7
Lsat_1_v5_gn_8_160501 Lactuca sativa HOM05D003670 ORTHO05D002209 2.1e-06 57.8 33 78.8
Cre01.g008891 Chlamydomonas reinhardtii HOM05D003670 ORTHO05D031137 2.8e-06 57.4 58 43.1


User provided reference genes

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