Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G01418 Aquilegia oxysepala HOM05D004872 ORTHO05D006050 4.1e-108 394.8 208 100.0
Aqoxy72s001 Aquilegia oxysepala HOM05D004872 ORTHO05D006050 2.2e-85 319.3 171 99.4
Aqoxy2G00467 Aquilegia oxysepala HOM05D004872 ORTHO05D006050 1.5e-78 296.6 172 93.0
Aqoxy7G03169 Aquilegia oxysepala HOM05D004872 ORTHO05D006050 5.7e-78 294.7 172 90.7
Aqoxy7G03168 Aquilegia oxysepala HOM05D004872 ORTHO05D006050 9.2e-36 154.5 126 67.5
Dinv22205 Davidia involucrata HOM05D004872 ORTHO05D006050 2.3e-34 149.8 166 53.6
SalBow1G8122 Salvia bowleyana HOM05D004872 ORTHO05D006050 3.0e-34 149.4 150 57.3
TAR633G0253 Trochodendron aralioides HOM05D004872 ORTHO05D006050 3.0e-34 149.4 165 55.8
MSTRG.1742 Avicennia marina HOM05D004872 ORTHO05D006050 3.9e-34 149.1 171 54.4
SalBow6G3136 Salvia bowleyana HOM05D004872 ORTHO05D006050 8.6e-34 147.9 159 55.3
QL01p016491 Quercus lobata HOM05D004872 ORTHO05D006050 1.5e-33 147.1 145 56.6
QL01p024148 Quercus lobata HOM05D004872 ORTHO05D006050 1.5e-33 147.1 145 56.6
Cpa.g.sc34.184 Carica papaya HOM05D004872 ORTHO05D006050 3.3e-33 146.0 164 51.8
Duzib150G1163 Durio zibethinus HOM05D004872 ORTHO05D006050 4.3e-33 145.6 164 51.8
RcHm_v2.0_Chr5g0046151 Rosa chinensis HOM05D004872 ORTHO05D006050 5.6e-33 145.2 140 57.1
Sabra13G0065000 Salix brachista HOM05D004872 ORTHO05D006050 5.6e-33 145.2 183 49.2
FAN25G2824 Fragaria x ananassa HOM05D004872 ORTHO05D006050 7.3e-33 144.8 142 57.0
FvH4_3g25170 Fragaria vesca HOM05D004872 ORTHO05D006050 9.5e-33 144.4 142 57.0
GSVIVG01037356001 Vitis vinifera HOM05D004872 ORTHO05D006050 9.5e-33 144.4 162 54.3
Thecc.09G254600 Theobroma cacao HOM05D004872 ORTHO05D006050 1.2e-32 144.1 164 50.6
Atru.chr4.2930 Acer truncatum HOM05D004872 ORTHO05D006050 1.6e-32 143.7 174 50.6
Rhsim07G0167900 Rhododendron simsii HOM05D004872 ORTHO05D006050 2.8e-32 142.9 166 47.6
CiPaw.14G110500 Carya illinoinensis HOM05D004872 ORTHO05D006050 3.6e-32 142.5 120 61.7
Eucgr.J02277 Eucalyptus grandis HOM05D004872 ORTHO05D006050 6.2e-32 141.7 145 58.6
Hma1.2p1_0299F.1_g117840 Hydrangea macrophylla HOM05D004872 ORTHO05D006050 6.2e-32 141.7 169 50.9
Manes.09G068000 Manihot esculenta HOM05D004872 ORTHO05D006050 6.2e-32 141.7 162 51.9
Potri.013G075500 Populus trichocarpa HOM05D004872 ORTHO05D006050 6.2e-32 141.7 170 49.4
MD12G1010900 Malus domestica HOM05D004872 ORTHO05D006050 8.1e-32 141.4 158 51.9
Peaxi162Scf00025g02826 Petunia axillaris HOM05D004872 ORTHO05D006050 8.1e-32 141.4 144 54.9
Ciclev10006059m.g Citrus clementina HOM05D004872 ORTHO05D006050 1.1e-31 141.0 131 59.5
SGA_v2.0_scaffold144G35815 Striga asiatica HOM05D004872 ORTHO05D006050 1.1e-31 141.0 145 55.9
Prupe.7G012800 Prunus persica HOM05D004872 ORTHO05D006050 2.4e-31 139.8 159 50.3
CANSAT54G2026 Cannabis sativa HOM05D004872 ORTHO05D006050 5.2e-31 138.7 166 52.4
Lsat_1_v5_gn_3_110040 Lactuca sativa HOM05D004872 ORTHO05D006050 6.8e-31 138.3 179 46.4
CSS0006428 Camellia sinensis var. sinensis HOM05D004872 ORTHO05D006050 1.2e-30 137.5 178 48.9
Cc11_g04500 Coffea canephora HOM05D004872 ORTHO05D006050 1.2e-30 137.5 180 48.9
Cfa009914 Carpinus fangiana HOM05D004872 ORTHO05D006050 2.6e-30 136.3 156 50.6
ECA233G5422 Erigeron canadensis HOM05D004872 ORTHO05D006050 3.4e-30 136.0 153 48.4
Lsat_1_v5_gn_8_24740 Lactuca sativa HOM05D004872 ORTHO05D006050 3.4e-30 136.0 160 51.9
PGSC0003DMG400003977 Solanum tuberosum HOM05D004872 ORTHO05D006050 3.4e-30 136.0 156 53.8
CAN.G1549.27 Capsicum annuum HOM05D004872 ORTHO05D006050 4.4e-30 135.6 155 52.3
Haze_23271 Corylus avellana HOM05D004500 ORTHO05D005775 7.6e-30 134.8 156 52.6
Nn2g15815 Nelumbo nucifera HOM05D004872 ORTHO05D006050 1.7e-29 133.7 175 50.3
COL.COLO4_24934 Corchorus olitorius HOM05D004872 ORTHO05D006050 2.2e-29 133.3 130 54.6
arahy.Tifrunner.gnm1.ann1.EX2XSN Arachis hypogaea HOM05D004872 ORTHO05D006050 2.9e-29 132.9 174 47.1
Gohir.A09G108400 Gossypium hirsutum HOM05D004872 ORTHO05D006050 2.9e-29 132.9 160 48.8
CiPaw.13G148000 Carya illinoinensis HOM05D004872 ORTHO05D006050 3.8e-29 132.5 152 50.7
FAN11G3172 Fragaria x ananassa HOM05D004872 ORTHO05D006050 3.8e-29 132.5 100 69.0
Nn8g39701 Nelumbo nucifera HOM05D004872 ORTHO05D006050 3.8e-29 132.5 175 49.1
HanXRQChr08g0217181 Helianthus annuus HOM05D004872 ORTHO05D006050 4.9e-29 132.1 159 48.4
Sc11g0003110 Simmondsia chinensis HOM05D004872 ORTHO05D006050 1.1e-28 131.0 166 50.6
Gohir.D09G105300 Gossypium hirsutum HOM05D004872 ORTHO05D006050 1.4e-28 130.6 143 51.0
arahy.Tifrunner.gnm1.ann1.U00P2R Arachis hypogaea HOM05D004872 ORTHO05D006050 1.9e-28 130.2 174 46.0
DCAR_030961 Daucus carota HOM05D004872 ORTHO05D006050 1.9e-28 130.2 177 48.6
Prupe.4G268800 Prunus persica HOM05D004872 ORTHO05D006050 1.9e-28 130.2 183 45.4
Actinidia06989 Actinidia chinensis HOM05D004500 ORTHO05D005775 4.2e-28 129.0 113 58.4
HanXRQChr10g0315331 Helianthus annuus HOM05D004872 ORTHO05D006050 4.2e-28 129.0 160 47.5
Glyma.01G027700 Glycine max HOM05D004872 ORTHO05D006050 7.1e-28 128.3 154 48.1
Nitab4.5_0002138g0010 Nicotiana tabacum HOM05D004872 ORTHO05D006050 7.1e-28 128.3 138 52.9
MBI17_g09534_MAGBIO Magnolia biondii HOM05D004872 ORTHO05D006050 9.2e-28 127.9 165 48.5
THA.LOC104816943 Tarenaya hassleriana HOM05D004872 ORTHO05D006050 1.2e-27 127.5 131 51.9
PSO017G2452 Papaver somniferum HOM05D004872 ORTHO05D006050 1.6e-27 127.1 142 53.5
PSO017G5814 Papaver somniferum HOM05D004872 ORTHO05D006050 1.6e-27 127.1 142 53.5
PSO529G0002 Papaver somniferum HOM05D004872 ORTHO05D006050 1.6e-27 127.1 142 53.5
PSO591G0356 Papaver somniferum HOM05D004872 ORTHO05D006050 1.6e-27 127.1 142 53.5
PSO705G0001 Papaver somniferum HOM05D004872 ORTHO05D006050 1.6e-27 127.1 142 53.5
PSO591G0248 Papaver somniferum HOM05D004872 ORTHO05D006050 2.7e-27 126.3 142 53.5
AL4G43900 Arabidopsis lyrata HOM05D004872 ORTHO05D006050 4.6e-27 125.6 128 53.1
AUR62000220 Chenopodium quinoa HOM05D004872 ORTHO05D006050 4.6e-27 125.6 135 51.9
PSO541G2017 Papaver somniferum HOM05D004872 ORTHO05D006050 4.6e-27 125.6 139 53.2
Glyma.08G136100 Glycine max HOM05D004872 ORTHO05D006050 6.0e-27 125.2 175 44.6
Aa31LG1G26360 Aethionema arabicum HOM05D004872 ORTHO05D006050 1.0e-26 124.4 149 48.3
Gorai.006G122300 Gossypium raimondii HOM05D004872 ORTHO05D006050 1.0e-26 124.4 144 50.0
Lj6g0009628 Lotus japonicus HOM05D004872 ORTHO05D006050 1.7e-26 123.6 180 43.3
Lj6g0013181 Lotus japonicus HOM05D004872 ORTHO05D006050 1.7e-26 123.6 180 43.3
TPR.G29301 Trifolium pratense HOM05D004872 ORTHO05D006050 5.1e-26 122.1 157 46.5
TWI31G0308 Tripterygium wilfordii HOM05D004872 ORTHO05D006050 5.1e-26 122.1 181 47.0
CDE05G2894 Ceratophyllum demersum HOM05D004872 ORTHO05D006050 8.7e-26 121.3 143 50.3
Thhalv10019047m.g Eutrema salsugineum HOM05D004872 ORTHO05D006050 8.7e-26 121.3 165 44.2
Migut.E01400 Erythranthe guttata HOM05D004872 ORTHO05D006050 1.1e-25 120.9 168 47.0
Hund07423 Selenicereus undatus HOM05D004872 ORTHO05D006050 1.5e-25 120.6 122 52.5
AT2G44820 Arabidopsis thaliana HOM05D004872 ORTHO05D006050 2.5e-25 119.8 179 45.3
MELO3C014544.2 Cucumis melo HOM05D004872 ORTHO05D006050 5.6e-25 118.6 148 48.0
Os01g0224500 Oryza sativa ssp. japonica HOM05D004872 ORTHO05D006050 5.6e-25 118.6 155 46.5
Psat2g130480 Pisum sativum HOM05D004872 ORTHO05D006050 5.6e-25 118.6 155 45.8
Solyc11g005570.2 Solanum lycopersicum HOM05D004872 ORTHO05D006050 5.6e-25 118.6 155 48.4
Sopen11g001540 Solanum pennellii HOM05D004872 ORTHO05D006050 5.6e-25 118.6 155 48.4
VMungo0251G0214 Vigna mungo HOM05D004872 ORTHO05D006050 5.6e-25 118.6 177 42.9
ECA236G0590 Erigeron canadensis HOM05D004872 ORTHO05D006050 7.3e-25 118.2 117 57.3
CARHR140030 Cardamine hirsuta HOM05D004872 ORTHO05D006050 9.6e-25 117.9 151 46.4
CsaV3_6G038800 Cucumis sativus L. HOM05D004872 ORTHO05D006050 9.6e-25 117.9 148 48.0
AUR62006565 Chenopodium quinoa HOM05D004872 ORTHO05D006050 1.2e-24 117.5 143 48.3
ClCG02G022680 Citrullus lanatus HOM05D004872 ORTHO05D006050 1.2e-24 117.5 171 45.0
TPR.G26917 Trifolium pratense HOM05D004872 ORTHO05D006050 1.2e-24 117.5 153 45.8
Sp4g26910 Schrenkiella parvula HOM05D004872 ORTHO05D006050 1.6e-24 117.1 161 44.7
BcaB02g10512 Brassica carinata HOM05D004872 ORTHO05D006050 2.1e-24 116.7 175 42.3
Carub.0004s2739 Capsella rubella HOM05D004872 ORTHO05D006050 3.6e-24 115.9 143 46.9
Medtr7g096840 Medicago truncatula HOM05D004872 ORTHO05D006050 3.6e-24 115.9 186 42.5
Ah.04g159640 Amaranthus hybridus HOM05D004872 ORTHO05D006050 4.7e-24 115.5 167 43.7
arahy.Tifrunner.gnm1.ann1.K1U5S9 Arachis hypogaea HOM05D004872 ORTHO05D006050 6.2e-24 115.2 201 40.3
Phvul.002G255800 Phaseolus vulgaris HOM05D004872 ORTHO05D006050 6.2e-24 115.2 176 42.0
EL10Ac4g10086 Beta vulgaris HOM05D004872 ORTHO05D006050 2.4e-23 113.2 143 48.3
HPP92_015870 Vanilla planifolia HOM05D004872 ORTHO05D006050 2.4e-23 113.2 136 50.0
Nitab4.5_0001582g0110 Nicotiana tabacum HOM05D004872 ORTHO05D006050 3.1e-23 112.8 124 53.2
BolC4t22211H Brassica oleracea HOM05D004872 ORTHO05D006050 5.3e-23 112.1 156 45.5
BolC4t23202H Brassica oleracea HOM05D004872 ORTHO05D006050 5.3e-23 112.1 151 45.0
A05p12650 Brassica napus HOM05D004872 ORTHO05D006050 6.9e-23 111.7 152 44.1
Oeu040527.1 Olea europaea HOM05D004872 ORTHO05D006050 6.9e-23 111.7 128 53.1
BraA05t20203Z Brassica rapa HOM05D004872 ORTHO05D006050 9.0e-23 111.3 152 44.1
Lalb_Chr04g0249071 Lupinus albus HOM05D004872 ORTHO05D006050 9.0e-23 111.3 176 43.8
Oeu026038.1 Olea europaea HOM05D004872 ORTHO05D006050 9.0e-23 111.3 128 52.3
Manes.08G069866 Manihot esculenta HOM05D004872 ORTHO05D006050 1.2e-22 110.9 147 44.9
Aa31LG9G10050 Aethionema arabicum HOM05D004872 ORTHO05D006050 2.0e-22 110.2 155 47.1
arahy.Tifrunner.gnm1.ann1.R4J47E Arachis hypogaea HOM05D004872 ORTHO05D006050 2.0e-22 110.2 208 40.4
Sed0007255 Sechium edule HOM05D004872 ORTHO05D006050 2.6e-22 109.8 160 44.4
BcaB02g08868 Brassica carinata HOM05D004872 ORTHO05D006050 3.4e-22 109.4 142 48.6
BcaC02g12267 Brassica carinata HOM05D004872 ORTHO05D006050 4.4e-22 109.0 130 49.2
C04p05820 Brassica napus HOM05D004872 ORTHO05D006050 4.4e-22 109.0 130 49.2
A05p04990 Brassica napus HOM05D004872 ORTHO05D006050 7.6e-22 108.2 159 45.3
BraA05t19473Z Brassica rapa HOM05D004872 ORTHO05D006050 2.2e-21 106.7 130 48.5
vmacro05825 Vaccinium macrocarpon HOM05D004872 ORTHO05D006050 2.9e-21 106.3 160 41.9
Sp2g10980 Schrenkiella parvula HOM05D004872 ORTHO05D006050 3.2e-20 102.8 144 45.8
AL7G43510 Arabidopsis lyrata HOM05D004872 ORTHO05D006050 1.6e-19 100.5 143 43.4
Zm00001eb192850 Zea mays HOM05D004872 ORTHO05D006050 1.3e-18 97.4 164 40.9
CiPaw.13G148200 Carya illinoinensis HOM05D004872 ORTHO05D006050 2.5e-17 93.2 141 46.1
ATR0665G028 Amborella trichopoda HOM05D004872 ORTHO05D006050 4.3e-17 92.4 136 41.2
BcaC02g11364 Brassica carinata HOM05D004872 ORTHO05D006050 1.8e-15 87.0 135 43.7
arahy.Tifrunner.gnm1.ann1.X2Q8UN Arachis hypogaea HOM05D004872 ORTHO05D006050 3.1e-15 86.3 152 37.5
Zm00001eb281550 Zea mays HOM05D004872 ORTHO05D006050 4.5e-14 82.4 133 42.1
Sc11g0003120 Simmondsia chinensis HOM05D004872 ORTHO05D006050 7.6e-14 81.6 104 51.9
AagrBONN_evm.TU.Sc2ySwM_362.236 Anthoceros agrestis HOM05D004872 ORTHO05D006050 3.5e-11 72.8 157 33.1
PGR102G1802 Punica granatum HOM05D004872 ORTHO05D006050 3.5e-11 72.8 175 31.4
SEGI_13451 Sequoiadendron giganteum HOM05D004872 ORTHO05D006050 3.9e-10 69.3 127 36.2
Mapoly0036s0026 Marchantia polymorpha HOM05D004872 ORTHO05D006050 6.7e-10 68.6 150 32.7
HanXRQChr17g0569331 Helianthus annuus HOM05D004872 ORTHO05D006050 4.3e-09 65.9 71 47.9
Zm00001eb416880 Zea mays HOM05D004872 ORTHO05D006050 1.3e-08 64.3 112 40.2
Pp3c23_7100 Physcomitrium patens HOM05D004872 ORTHO05D006050 6.2e-08 62.0 159 31.4
Duzib170G0487 Durio zibethinus HOM05D004872 ORTHO05D006050 5.3e-07 58.9 39 64.1
Ca_21429_v3 Cicer arietinum L. HOM05D004872 ORTHO05D006050 9.9e-06 54.7 81 43.2


User provided reference genes

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