Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G01395 Aquilegia oxysepala HOM05D004432 ORTHO05D005427 1.8e-151 539.3 279 100.0
TAR624G0396 Trochodendron aralioides HOM05D004432 ORTHO05D005427 2.1e-35 153.7 370 34.3
MBI18_g00544_MAGBIO Magnolia biondii HOM05D004432 ORTHO05D005427 3.0e-34 149.8 367 34.3
Cpa.g.sc30.114 Carica papaya HOM05D004432 ORTHO05D005427 4.0e-34 149.4 351 33.6
Dinv31191 Davidia involucrata HOM05D004432 ORTHO05D005427 1.2e-33 147.9 365 34.2
GSVIVG01012145001 Vitis vinifera HOM05D004432 ORTHO05D005427 4.4e-33 146.0 366 34.4
PSO541G2602 Papaver somniferum HOM05D004432 ORTHO05D005427 2.2e-32 143.7 372 32.5
Gohir.A12G049500 Gossypium hirsutum HOM05D004432 ORTHO05D005427 4.9e-32 142.5 353 33.7
Gohir.D12G047900 Gossypium hirsutum HOM05D004432 ORTHO05D005427 4.9e-32 142.5 353 33.4
Nn7g38330 Nelumbo nucifera HOM05D004432 ORTHO05D005427 1.1e-31 141.4 360 34.4
Hma1.2p1_0088F.1_g045180 Hydrangea macrophylla HOM05D004432 ORTHO05D005427 2.4e-31 140.2 364 33.2
Thecc.02G004200 Theobroma cacao HOM05D004432 ORTHO05D005427 2.4e-31 140.2 358 32.7
GSVIVG01015880001 Vitis vinifera HOM05D004432 ORTHO05D005427 3.2e-31 139.8 358 31.6
HanXRQChr09g0257831 Helianthus annuus HOM05D004432 ORTHO05D005427 5.4e-31 139.0 341 34.6
COL.COLO4_18029 Corchorus olitorius HOM05D004432 ORTHO05D003521 7.0e-31 138.7 369 32.5
ECA232G3357 Erigeron canadensis HOM05D004432 ORTHO05D005427 1.2e-30 137.9 347 31.7
FAN21G3105 Fragaria x ananassa HOM05D004432 ORTHO05D005427 2.7e-30 136.7 350 33.1
Gorai.008G050900 Gossypium raimondii HOM05D004432 ORTHO05D005427 3.5e-30 136.3 346 33.2
Aqoxy1G01396 Aquilegia oxysepala HOM05D004432 ORTHO05D005427 4.6e-30 136.0 360 34.2
FvH4_3g12940 Fragaria vesca HOM05D004432 ORTHO05D005427 4.6e-30 136.0 350 33.4
FAN25G3492 Fragaria x ananassa HOM05D004432 ORTHO05D005427 4.6e-30 136.0 350 33.4
PSO675G3183 Papaver somniferum HOM05D004432 ORTHO05D005427 4.6e-30 136.0 356 32.9
Sabra03G0044900 Salix brachista HOM05D004432 ORTHO05D005427 4.6e-30 136.0 367 32.7
Duzib132G0752 Durio zibethinus HOM05D004432 ORTHO05D005427 5.9e-30 135.6 352 33.0
MD05G1247000 Malus domestica HOM05D004432 ORTHO05D005427 5.9e-30 135.6 348 32.8
MD10G1227600 Malus domestica HOM05D004432 ORTHO05D005427 1.0e-29 134.8 349 32.7
Potri.001G160700 Populus trichocarpa HOM05D004432 ORTHO05D005427 1.0e-29 134.8 353 33.4
FAN16G2829 Fragaria x ananassa HOM05D004432 ORTHO05D005427 2.3e-29 133.7 350 33.1
Manes.03G075400 Manihot esculenta HOM05D004432 ORTHO05D005427 2.3e-29 133.7 360 31.9
Actinidia33704 Actinidia chinensis HOM05D004432 ORTHO05D005427 3.9e-29 132.9 349 31.8
Lj1A1149G74 Lonicera japonica HOM05D004432 ORTHO05D005427 5.0e-29 132.5 375 31.2
Ciclev10015448m.g Citrus clementina HOM05D004432 ORTHO05D005427 1.1e-28 131.3 360 32.5
Peaxi162Scf00048g01413 Petunia axillaris HOM05D004432 ORTHO05D005427 1.1e-28 131.3 348 30.7
FAN11G2748 Fragaria x ananassa HOM05D004432 ORTHO05D005427 1.9e-28 130.6 343 33.2
CSS0046356 Camellia sinensis var. sinensis HOM05D004432 ORTHO05D005427 2.5e-28 130.2 320 35.0
CSS0030674 Camellia sinensis var. sinensis HOM05D004432 ORTHO05D005427 3.3e-28 129.8 360 31.7
TAR629G1033 Trochodendron aralioides HOM05D004432 ORTHO05D005427 5.6e-28 129.0 220 41.4
Actinidia22430 Actinidia chinensis HOM05D004432 ORTHO05D005427 7.3e-28 128.6 352 31.5
SalBow8G1652 Salvia bowleyana HOM05D004432 ORTHO05D005427 7.3e-28 128.6 368 29.3
RcHm_v2.0_Chr5g0021051 Rosa chinensis HOM05D004432 ORTHO05D005427 1.2e-27 127.9 360 32.5
CANSAT35G1493 Cannabis sativa HOM05D004432 ORTHO05D005427 1.6e-27 127.5 350 32.6
CAN.G809.71 Capsicum annuum HOM05D004432 ORTHO05D005427 1.6e-27 127.5 343 32.4
Duzib248G0466 Durio zibethinus HOM05D004432 ORTHO05D005427 1.6e-27 127.5 346 32.1
Cc09_g05240 Coffea canephora HOM05D004432 ORTHO05D005427 2.8e-27 126.7 360 30.3
TWI15G0381 Tripterygium wilfordii HOM05D004432 ORTHO05D005427 2.8e-27 126.7 367 30.2
Peaxi162Scf00198g01525 Petunia axillaris HOM05D004432 ORTHO05D005427 3.6e-27 126.3 360 30.8
Atru.chr10.352 Acer truncatum HOM05D004432 ORTHO05D005427 6.2e-27 125.6 361 30.7
PGSC0003DMG401017733 Solanum tuberosum HOM05D004432 ORTHO05D005427 8.0e-27 125.2 352 31.5
HPP92_006155 Vanilla planifolia HOM05D004432 ORTHO05D005427 8.0e-27 125.2 317 35.0
Nitab4.5_0006794g0040 Nicotiana tabacum HOM05D004432 ORTHO05D005427 1.1e-26 124.8 347 30.5
Nitab4.5_0010401g0010 Nicotiana tabacum HOM05D004432 ORTHO05D005427 1.1e-26 124.8 347 30.3
SGA_v2.0_scaffold298G47706 Striga asiatica HOM05D004432 ORTHO05D005427 4.0e-26 122.9 368 31.0
Oeu018409.2 Olea europaea HOM05D004432 ORTHO05D005427 5.2e-26 122.5 360 31.4
Os09g0560900 Oryza sativa ssp. japonica HOM05D004432 ORTHO05D005427 6.8e-26 122.1 338 30.2
arahy.Tifrunner.gnm1.ann1.AGE02H Arachis hypogaea HOM05D004432 ORTHO05D005427 8.9e-26 121.7 351 32.2
CsaV3_6G052770 Cucumis sativus L. HOM05D004432 ORTHO05D005427 1.5e-25 120.9 365 31.2
TWI63G0296 Tripterygium wilfordii HOM05D004432 ORTHO05D005427 1.5e-25 120.9 370 29.7
Solyc02g081620.3 Solanum lycopersicum HOM05D004432 ORTHO05D005427 2.0e-25 120.6 352 31.5
TWI15G1036 Tripterygium wilfordii HOM05D004432 ORTHO05D005427 3.4e-25 119.8 367 30.0
HPP92_024334 Vanilla planifolia HOM05D004432 ORTHO05D005427 3.4e-25 119.8 338 34.3
arahy.Tifrunner.gnm1.ann1.GLQ3B3 Arachis hypogaea HOM05D004432 ORTHO05D005427 4.4e-25 119.4 351 31.9
BraA08t33081Z Brassica rapa HOM05D004432 ORTHO05D005427 4.4e-25 119.4 328 30.5
CiPaw.10G104800 Carya illinoinensis HOM05D004432 ORTHO05D005427 4.4e-25 119.4 361 32.1
TPR.G12851 Trifolium pratense HOM05D004432 ORTHO05D005427 4.4e-25 119.4 368 30.2
Sc16g0004480 Simmondsia chinensis HOM05D004432 ORTHO05D005427 5.8e-25 119.0 365 30.4
DCAR_003760 Daucus carota HOM05D004432 ORTHO05D005427 7.5e-25 118.6 357 29.7
Prupe.4G117400 Prunus persica HOM05D004432 ORTHO05D005427 9.8e-25 118.2 349 30.7
Aa31LG6G12370 Aethionema arabicum HOM05D004432 ORTHO05D005427 1.7e-24 117.5 349 30.7
MELO3C007033.2 Cucumis melo HOM05D004432 ORTHO05D005427 1.7e-24 117.5 358 31.3
Dinv05655 Davidia involucrata HOM05D004432 ORTHO05D005427 2.9e-24 116.7 366 30.3
Phvul.002G325100 Phaseolus vulgaris HOM05D004432 ORTHO05D005427 2.9e-24 116.7 361 30.5
Oeu056059.4 Olea europaea HOM05D004432 ORTHO05D005427 4.9e-24 115.9 368 29.3
Sed0004537 Sechium edule HOM05D004432 ORTHO05D005427 4.9e-24 115.9 368 31.2
A08p10850 Brassica napus HOM05D004432 ORTHO05D005427 6.4e-24 115.5 331 29.9
ATR0568G227 Amborella trichopoda HOM05D004432 ORTHO05D005427 8.3e-24 115.2 378 29.6
TWI34G0639 Tripterygium wilfordii HOM05D004432 ORTHO05D005427 8.3e-24 115.2 358 29.3
Atru.chr8.662 Acer truncatum HOM05D004432 ORTHO05D005427 1.1e-23 114.8 358 31.0
Eucgr.E04313 Eucalyptus grandis HOM05D004432 ORTHO05D005427 1.1e-23 114.8 353 32.0
BcaC07g37789 Brassica carinata HOM05D004432 ORTHO05D005427 1.4e-23 114.4 324 30.6
PGR042G3514 Punica granatum HOM05D004432 ORTHO05D005427 1.9e-23 114.0 367 29.2
ClCG01G025530 Citrullus lanatus HOM05D004432 ORTHO05D005427 2.4e-23 113.6 368 30.2
Sopen02g010370 Solanum pennellii HOM05D004432 ORTHO05D005427 3.2e-23 113.2 356 30.3
Sopen02g026240 Solanum pennellii HOM05D004432 ORTHO05D005427 3.2e-23 113.2 345 31.0
Solyc02g032120.3 Solanum lycopersicum HOM05D004432 ORTHO05D005427 9.2e-23 111.7 356 30.3
Psat7g005440 Pisum sativum HOM05D004432 ORTHO05D005427 1.6e-22 110.9 361 30.7
Sabra01G0131600 Salix brachista HOM05D004432 ORTHO05D005427 2.7e-22 110.2 359 31.5
Glyma.08G049300 Glycine max HOM05D004432 ORTHO05D005427 3.5e-22 109.8 374 29.7
BolC8t48181H Brassica oleracea HOM05D004432 ORTHO05D005427 4.6e-22 109.4 320 30.0
AT1G30970 Arabidopsis thaliana HOM05D004432 ORTHO05D005427 6.0e-22 109.0 358 28.5
Carub.0001s2938 Capsella rubella HOM05D004432 ORTHO05D005427 7.8e-22 108.6 355 29.6
QL11p012272 Quercus lobata HOM05D004432 ORTHO05D005427 7.8e-22 108.6 225 35.6
BcaB07g32757 Brassica carinata HOM05D004432 ORTHO05D005427 1.0e-21 108.2 347 31.4
unitig_748.g7489 Utricularia gibba HOM05D004432 ORTHO05D005427 1.0e-21 108.2 355 30.4
MSTRG.16369 Avicennia marina HOM05D004432 ORTHO05D005427 1.7e-21 107.5 362 28.5
Thhalv10008022m.g Eutrema salsugineum HOM05D004432 ORTHO05D005427 1.7e-21 107.5 350 30.0
Medtr8g106220 Medicago truncatula HOM05D004432 ORTHO05D005427 2.3e-21 107.1 364 30.5
BraA09t39051Z Brassica rapa HOM05D004432 ORTHO05D005427 3.0e-21 106.7 334 30.5
Lsat_1_v5_gn_8_106840 Lactuca sativa HOM05D004432 ORTHO05D005427 3.0e-21 106.7 351 29.9
Lalb_Chr05g0222011 Lupinus albus HOM05D004432 ORTHO05D005427 6.6e-21 105.5 366 28.4
BolC5t31752H Brassica oleracea HOM05D004432 ORTHO05D005427 8.6e-21 105.1 335 31.0
Glyma.05G241800 Glycine max HOM05D004432 ORTHO05D005427 8.6e-21 105.1 366 30.9
Migut.M02008 Erythranthe guttata HOM05D004432 ORTHO05D005427 2.5e-20 103.6 372 28.5
BcaC05g27130 Brassica carinata HOM05D004432 ORTHO05D005427 3.3e-20 103.2 335 30.7
C05p30150 Brassica napus HOM05D004432 ORTHO05D005427 3.3e-20 103.2 335 30.7
Potri.003G074200 Populus trichocarpa HOM05D004432 ORTHO05D005427 3.3e-20 103.2 230 34.3
SGA_v2.0_scaffold175G39329 Striga asiatica HOM05D004432 ORTHO05D005427 7.3e-20 102.1 432 26.9
Ca_17239_v3 Cicer arietinum L. HOM05D004432 ORTHO05D005427 9.5e-20 101.7 360 28.6
AL1G45380 Arabidopsis lyrata HOM05D004432 ORTHO05D005427 1.2e-19 101.3 351 28.2
VMungo0251G3730 Vigna mungo HOM05D004432 ORTHO05D005427 1.2e-19 101.3 365 28.5
BcaB04g18194 Brassica carinata HOM05D004432 ORTHO05D005427 1.6e-19 100.9 338 28.4
AUR62017849 Chenopodium quinoa HOM05D004432 ORTHO05D005427 1.6e-19 100.9 355 29.3
AUR62003535 Chenopodium quinoa HOM05D004432 ORTHO05D005427 2.1e-19 100.5 355 29.6
Sp1g26830 Schrenkiella parvula HOM05D004432 ORTHO05D005427 6.2e-19 99.0 348 29.3
SMO239G0124 Selaginella moellendorffii HOM05D004432 ORTHO05D005427 8.1e-19 98.6 290 28.6
THA.LOC104798567 Tarenaya hassleriana HOM05D004432 ORTHO05D005427 8.1e-19 98.6 356 27.2
CDE01G0579 Ceratophyllum demersum HOM05D007061 ORTHO05D009017 1.1e-18 98.2 310 31.6
A09p35240 Brassica napus HOM05D004432 ORTHO05D005427 1.8e-18 97.4 330 30.0
Lj4g0008002 Lotus japonicus HOM05D004432 ORTHO05D005427 1.8e-18 97.4 363 27.5
Lalb_Chr09g0330711 Lupinus albus HOM05D004432 ORTHO05D005427 5.2e-18 95.9 358 28.5
CiPaw.09G137500 Carya illinoinensis HOM05D004432 ORTHO05D005427 5.8e-17 92.4 125 38.4
EL10Ac6g15345 Beta vulgaris HOM05D004432 ORTHO05D005427 9.9e-17 91.7 362 27.3
Hund04373 Selenicereus undatus HOM05D004432 ORTHO05D005427 1.3e-16 91.3 121 39.7
vmacro03556 Vaccinium macrocarpon HOM05D004432 ORTHO05D005427 1.3e-16 91.3 270 31.1
SEGI_03989 Sequoiadendron giganteum HOM05D004432 ORTHO05D005427 3.7e-16 89.7 158 34.2
SEGI_00495 Sequoiadendron giganteum HOM05D004432 ORTHO05D005427 1.9e-15 87.4 380 25.8
Cfa001128 Carpinus fangiana HOM05D004432 ORTHO05D005427 1.3e-13 81.3 320 29.7
AagrBONN_evm.TU.Sc2ySwM_344.4234 Anthoceros agrestis HOM05D004432 ORTHO05D005427 1.7e-13 80.9 388 26.8
Mapoly0070s0095 Marchantia polymorpha HOM05D004432 ORTHO05D005427 1.7e-13 80.9 178 32.0
Rhsim13G0133800 Rhododendron simsii HOM05D004432 ORTHO05D005427 2.5e-12 77.0 258 31.4
RhsimUnG0176800 Rhododendron simsii HOM05D004432 ORTHO05D005427 2.5e-12 77.0 258 31.4
CBR_g1074 Chara braunii HOM05D004432 ORTHO05D005427 5.6e-12 75.9 153 32.0
Lalb_Chr10g0095541 Lupinus albus HOM05D004432 ORTHO05D005427 7.3e-12 75.5 351 26.8
TWI32G0924 Tripterygium wilfordii HOM05D004432 ORTHO05D005427 1.6e-11 74.3 292 27.1
Haze_05262 Corylus avellana HOM05D004432 ORTHO05D005427 2.8e-11 73.6 105 39.0
Rhsim13G0133700 Rhododendron simsii HOM05D004432 ORTHO05D005427 2.8e-11 73.6 106 36.8
RhsimUnG0176700 Rhododendron simsii HOM05D004432 ORTHO05D005427 2.8e-11 73.6 106 36.8
Pp3c22_1400 Physcomitrium patens HOM05D004432 ORTHO05D005427 8.1e-11 72.0 393 24.7
Dinv23014 Davidia involucrata HOM05D004432 ORTHO05D005427 8.9e-10 68.6 102 36.3
Dinv23013 Davidia involucrata HOM05D004432 ORTHO05D005427 1.2e-09 68.2 222 31.1
CiPaw.09G137600 Carya illinoinensis HOM05D004432 ORTHO05D005427 3.8e-08 63.2 66 54.5
Haze_05275 Corylus avellana HOM05D004432 ORTHO05D005427 6.0e-06 55.8 59 54.2
Sopen12g027920 Solanum pennellii HOM05D004432 ORTHO05D005427 6.0e-06 55.8 50 50.0


User provided reference genes

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