Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G01332 Aquilegia oxysepala HOM05D000010 ORTHO05D000063 2.7e-82 308.5 149 100.0
TAR624G0903 Trochodendron aralioides HOM05D000010 ORTHO05D000063 1.2e-24 117.1 141 52.5
Haze_18445 Corylus avellana HOM05D000010 ORTHO05D000063 2.0e-24 116.3 153 49.7
Atru.chr1.2 Acer truncatum HOM05D000010 ORTHO05D000063 1.3e-23 113.6 149 50.3
Manes.16G055200 Manihot esculenta HOM05D000010 ORTHO05D000063 1.7e-23 113.2 143 50.3
Phvul.005G044600 Phaseolus vulgaris HOM05D000010 ORTHO05D000063 3.8e-23 112.1 151 45.7
Nn4g26681 Nelumbo nucifera HOM05D000010 ORTHO05D000063 8.4e-23 110.9 133 51.1
Thecc.07G193800 Theobroma cacao HOM05D000010 ORTHO05D000063 4.2e-22 108.6 138 47.1
Duzib187G1558 Durio zibethinus HOM05D000010 ORTHO05D000063 7.1e-22 107.8 140 46.4
MBI10_g30428_MAGBIO Magnolia biondii HOM05D000010 ORTHO05D000063 4.6e-21 105.1 138 49.3
Ciclev10006623m.g Citrus clementina HOM05D000010 ORTHO05D000063 7.8e-21 104.4 145 49.0
VMungo1080G0286 Vigna mungo HOM05D000010 ORTHO05D000063 1.0e-20 104.0 151 43.0
Potri.008G080000 Populus trichocarpa HOM05D000010 ORTHO05D000063 1.3e-20 103.6 143 47.6
Potri.010G176600 Populus trichocarpa HOM05D000010 ORTHO05D000063 1.7e-20 103.2 143 49.7
Glyma.08G161300 Glycine max HOM05D000010 ORTHO05D000063 2.3e-20 102.8 149 47.0
Sabra10G0135800 Salix brachista HOM05D000010 ORTHO05D000063 5.1e-20 101.7 143 48.3
Glyma.15G266500 Glycine max HOM05D000010 ORTHO05D000063 1.1e-19 100.5 143 48.3
Manes.03G076500 Manihot esculenta HOM05D000010 ORTHO05D000063 1.5e-19 100.1 162 45.7
QL04p096632 Quercus lobata HOM05D000010 ORTHO05D000063 3.3e-19 99.0 155 45.2
Dinv42446 Davidia involucrata HOM05D000010 ORTHO05D000063 4.8e-18 95.1 135 47.4
CSS0002515 Camellia sinensis var. sinensis HOM05D000010 ORTHO05D000063 6.2e-18 94.7 156 44.9
RcHm_v2.0_Chr5g0022511 Rosa chinensis HOM05D000010 ORTHO05D000063 6.2e-18 94.7 164 42.1
Lalb_Chr25g0284001 Lupinus albus HOM05D000010 ORTHO05D000063 8.1e-18 94.4 147 43.5
MD10G1220600 Malus domestica HOM05D000010 ORTHO05D000063 8.1e-18 94.4 173 42.8
Lalb_Chr01g0015701 Lupinus albus HOM05D000010 ORTHO05D000063 1.1e-17 94.0 150 44.7
FAN25G0548 Fragaria x ananassa HOM05D000010 ORTHO05D000063 1.8e-17 93.2 156 43.6
Peaxi162Scf00006g00229 Petunia axillaris HOM05D000010 ORTHO05D000063 4.0e-17 92.0 134 47.0
CiPaw.16G078600 Carya illinoinensis HOM05D000010 ORTHO05D000063 6.9e-17 91.3 147 41.5
Nitab4.5_0001995g0010 Nicotiana tabacum HOM05D000010 ORTHO05D000063 6.9e-17 91.3 154 45.5
MD00G1085300 Malus domestica HOM05D000010 ORTHO05D000063 2.0e-16 89.7 174 41.4
Nitab4.5_0000007g0400 Nicotiana tabacum HOM05D000010 ORTHO05D000063 2.6e-16 89.4 154 44.8
FvH4_3g13550 Fragaria vesca HOM05D000010 ORTHO05D000063 4.5e-16 88.6 169 39.6
Lj3g0002573 Lotus japonicus HOM05D000010 ORTHO05D000063 7.6e-16 87.8 156 42.9
arahy.Tifrunner.gnm1.ann1.YSLF5V Arachis hypogaea HOM05D000010 ORTHO05D000063 9.9e-16 87.4 154 40.9
FAN16G1539 Fragaria x ananassa HOM05D000010 ORTHO05D000063 1.3e-15 87.0 169 38.5
FAN21G3699 Fragaria x ananassa HOM05D000010 ORTHO05D000063 1.3e-15 87.0 170 38.8
FAN11G1545 Fragaria x ananassa HOM05D000010 ORTHO05D000063 1.7e-15 86.7 169 39.1
Rhsim04G0004000 Rhododendron simsii HOM05D000010 ORTHO05D000063 1.7e-15 86.7 162 40.7
CAN.G67.3 Capsicum annuum HOM05D000010 ORTHO05D000063 2.2e-15 86.3 155 45.2
arahy.Tifrunner.gnm1.ann1.GDX8G8 Arachis hypogaea HOM05D000010 ORTHO05D000063 3.8e-15 85.5 140 42.1
MBI07_g23434_MAGBIO Magnolia biondii HOM05D000010 ORTHO05D000063 3.8e-15 85.5 149 38.9
ATR0737G021 Amborella trichopoda HOM05D000010 ORTHO05D000063 4.9e-15 85.1 142 43.7
vmacro09757 Vaccinium macrocarpon HOM05D000010 ORTHO05D000063 6.4e-15 84.7 179 38.0
Prupe.4G123700 Prunus persica HOM05D000010 ORTHO05D000063 1.1e-14 84.0 167 38.9
MBI07_g10949_MAGBIO Magnolia biondii HOM05D000010 ORTHO05D000063 5.4e-14 81.6 137 40.1
COL.COLO4_32266 Corchorus olitorius HOM05D000010 ORTHO05D000063 7.1e-14 81.3 160 37.5
Gohir.D08G251800 Gossypium hirsutum HOM05D000010 ORTHO05D000063 9.3e-14 80.9 168 35.1
CiPaw.15G109900 Carya illinoinensis HOM05D000010 ORTHO05D000063 1.2e-13 80.5 153 40.5
Cc00_g09070 Coffea canephora HOM05D000010 ORTHO05D000063 1.2e-13 80.5 125 41.6
Gorai.004G268500 Gossypium raimondii HOM05D000010 ORTHO05D000063 1.2e-13 80.5 167 35.3
Medtr2g062730 Medicago truncatula HOM05D000010 ORTHO05D000063 1.2e-13 80.5 167 40.7
A02p22990 Brassica napus HOM05D000010 ORTHO05D000063 2.7e-13 79.3 149 39.6
BraA02t07295Z Brassica rapa HOM05D000010 ORTHO05D000063 2.7e-13 79.3 149 39.6
Gohir.A08G231400 Gossypium hirsutum HOM05D000010 ORTHO05D000063 2.7e-13 79.3 162 37.0
Aa31LG4G1390 Aethionema arabicum HOM05D000010 ORTHO05D000063 1.3e-12 77.0 130 39.2
BcaB05g25207 Brassica carinata HOM05D000010 ORTHO05D000063 1.8e-12 76.6 151 38.4
ECA247G1306 Erigeron canadensis HOM05D000010 ORTHO05D000063 5.1e-12 75.1 150 41.3
Oeu029458.1 Olea europaea HOM05D000010 ORTHO05D000063 6.7e-12 74.7 142 41.5
Psat1g130480 Pisum sativum HOM05D000010 ORTHO05D000063 6.7e-12 74.7 176 37.5
Actinidia03635 Actinidia chinensis HOM05D000010 ORTHO05D000063 8.7e-12 74.3 136 42.6
BraA07t31970Z Brassica rapa HOM05D000010 ORTHO05D000063 1.5e-11 73.6 136 38.2
Hma1.2p1_1866F.1_g305840 Hydrangea macrophylla HOM05D000010 ORTHO05D000063 1.5e-11 73.6 150 40.0
Hma1.2p1_1417F.1_g282160 Hydrangea macrophylla HOM05D000010 ORTHO05D000063 1.9e-11 73.2 150 40.0
Carub.0002s2646 Capsella rubella HOM05D000010 ORTHO05D000063 2.5e-11 72.8 170 33.5
Oeu016923.2 Olea europaea HOM05D000010 ORTHO05D000063 2.5e-11 72.8 128 43.8
A07p44610 Brassica napus HOM05D000010 ORTHO05D000063 3.3e-11 72.4 137 38.7
PGSC0003DMG400009665 Solanum tuberosum HOM05D000010 ORTHO05D000063 3.3e-11 72.4 137 44.5
BcaC08g47518 Brassica carinata HOM05D000010 ORTHO05D000063 7.4e-11 71.2 140 36.4
C06p53450 Brassica napus HOM05D000010 ORTHO05D000063 7.4e-11 71.2 140 36.4
BolC6t40360H Brassica oleracea HOM05D000010 ORTHO05D000063 7.4e-11 71.2 140 36.4
BcaB02g07227 Brassica carinata HOM05D000010 ORTHO05D000063 1.3e-10 70.5 157 35.7
C06p29790 Brassica napus HOM05D000010 ORTHO05D000063 1.3e-10 70.5 157 35.7
BolC6t38140H Brassica oleracea HOM05D000010 ORTHO05D000063 1.3e-10 70.5 157 35.7
Thhalv10019534m.g Eutrema salsugineum HOM05D000010 ORTHO05D000063 1.3e-10 70.5 167 34.7
THA.LOC104812398 Tarenaya hassleriana HOM05D000010 ORTHO05D000063 1.3e-10 70.5 145 37.2
Sp5g34640 Schrenkiella parvula HOM05D000010 ORTHO05D000063 1.6e-10 70.1 171 34.5
vmacro04433 Vaccinium macrocarpon HOM05D000010 ORTHO05D000063 1.6e-10 70.1 161 41.6
Zm00001eb277900 Zea mays HOM05D000010 ORTHO05D000063 3.7e-10 68.9 176 34.7
AT1G79580 Arabidopsis thaliana HOM05D000010 ORTHO05D000063 8.1e-10 67.8 149 36.2
Sopen12g008180 Solanum pennellii HOM05D000010 ORTHO05D000063 8.1e-10 67.8 145 42.1
TWI38G0844 Tripterygium wilfordii HOM05D000010 ORTHO05D000063 1.1e-09 67.4 129 39.5
PSO675G1053 Papaver somniferum HOM05D000010 ORTHO05D000063 1.4e-09 67.0 169 35.5
HanXRQChr05g0160511 Helianthus annuus HOM05D000010 ORTHO05D000063 1.8e-09 66.6 183 34.4
Migut.H01646 Erythranthe guttata HOM05D000010 ORTHO05D000063 2.4e-09 66.2 119 43.7
BcaC03g15911 Brassica carinata HOM05D000010 ORTHO05D000063 3.1e-09 65.9 144 37.5
AL2G40250 Arabidopsis lyrata HOM05D000010 ORTHO05D000063 4.0e-09 65.5 164 32.9
PSO541G0767 Papaver somniferum HOM05D000010 ORTHO05D000063 4.0e-09 65.5 170 34.7
Solyc12g017400.3 Solanum lycopersicum HOM05D000010 ORTHO05D000063 4.0e-09 65.5 145 40.7
C02p36740 Brassica napus HOM05D000010 ORTHO05D000063 9.0e-09 64.3 144 36.8
Sc18g0003460 Simmondsia chinensis HOM05D000010 ORTHO05D000063 1.2e-08 63.9 142 37.3
DCAR_016856 Daucus carota HOM05D000010 ORTHO05D000063 1.5e-08 63.5 133 36.8
TPR.G3633 Trifolium pratense HOM05D000010 ORTHO05D000063 2.0e-08 63.2 109 44.0
Zm00001eb383230 Zea mays HOM05D000010 ORTHO05D000063 2.0e-08 63.2 167 34.7
THA.LOC104808156 Tarenaya hassleriana HOM05D000010 ORTHO05D000063 2.6e-08 62.8 151 35.8
GSVIVG01036682001 Vitis vinifera HOM05D000010 ORTHO05D000063 4.5e-08 62.0 129 37.2
ECA248G1130 Erigeron canadensis HOM05D000010 ORTHO05D000063 5.8e-08 61.6 145 33.8
HanXRQChr08g0232351 Helianthus annuus HOM05D000010 ORTHO05D000063 5.8e-08 61.6 148 35.1
CARHR073310 Cardamine hirsuta HOM05D000010 ORTHO05D000063 1.3e-07 60.5 167 31.1
EL10Ac1g01508 Beta vulgaris HOM05D000010 ORTHO05D000063 2.2e-07 59.7 142 33.1
Cpa.g.sc118.26 Carica papaya HOM05D000010 ORTHO05D000063 2.2e-07 59.7 143 35.0
A07p27050 Brassica napus HOM05D000010 ORTHO05D000063 2.9e-07 59.3 155 31.6
BraA07t30349Z Brassica rapa HOM05D000010 ORTHO05D000063 2.9e-07 59.3 155 31.6
Migut.M01489 Erythranthe guttata HOM05D000010 ORTHO05D000063 2.9e-07 59.3 105 41.0
EL10Ac1g01507 Beta vulgaris HOM05D000010 ORTHO05D000063 3.8e-07 58.9 140 32.1
AUR62013541 Chenopodium quinoa HOM05D000010 ORTHO05D000063 4.9e-07 58.5 85 45.9
Oeu025988.1 Olea europaea HOM05D000010 ORTHO05D000063 6.4e-07 58.2 75 50.7
PGR031G2726 Punica granatum HOM05D000010 ORTHO05D000063 1.4e-06 57.0 180 33.9
Ca_03282_v3 Cicer arietinum L. HOM05D000010 ORTHO05D000063 1.9e-06 56.6 105 40.0


User provided reference genes

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