Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G01263 Aquilegia oxysepala HOM05D007641 ORTHO05D007630 0.0e+00 1706.0 838 100.0
Dinv28733 Davidia involucrata HOM05D007641 ORTHO05D007630 2.8e-99 367.5 826 34.7
QL01p024477 Quercus lobata HOM05D007641 ORTHO05D007630 2.1e-91 341.3 792 34.8
Nn2g10289 Nelumbo nucifera HOM05D007641 ORTHO05D007630 3.0e-85 320.9 854 32.9
CiPaw.13G063300 Carya illinoinensis HOM05D007641 ORTHO05D007630 1.0e-72 279.3 797 32.0
Actinidia34497 Actinidia chinensis HOM05D007641 ORTHO05D007630 8.5e-72 276.2 825 32.1
Atru.chr10.2293 Acer truncatum HOM05D007641 ORTHO05D007630 4.1e-66 257.3 814 31.6
MBI15_g36478_MAGBIO Magnolia biondii HOM05D007641 ORTHO05D007630 8.2e-59 233.0 674 33.7
vmacro14640 Vaccinium macrocarpon HOM05D007641 ORTHO05D007630 1.2e-57 229.2 619 30.7
PSO170G4823 Papaver somniferum HOM05D007641 ORTHO05D007630 1.0e-56 226.1 832 29.7
Thecc.09G364100 Theobroma cacao HOM05D007641 ORTHO05D007630 1.0e-56 226.1 851 29.8
Rhsim01G0243500 Rhododendron simsii HOM05D007641 ORTHO05D007630 1.1e-55 222.6 738 29.1
Potri.013G157800 Populus trichocarpa HOM05D007641 ORTHO05D007630 2.7e-54 218.0 710 30.7
Haze_24474 Corylus avellana HOM05D007641 ORTHO05D007630 1.0e-53 216.1 580 31.7
Sabra13G0126700 Salix brachista HOM05D007641 ORTHO05D002352 2.3e-53 214.9 703 30.4
Manes.02G212232 Manihot esculenta HOM05D007641 ORTHO05D007630 4.4e-52 210.7 708 30.1
CANSAT54G2173 Cannabis sativa HOM05D007641 ORTHO05D007630 1.3e-51 209.1 813 29.8
RcHm_v2.0_Chr5g0073231 Rosa chinensis HOM05D007641 ORTHO05D007630 1.7e-51 208.8 718 30.9
TWI79G1607 Tripterygium wilfordii HOM05D007641 ORTHO05D007630 1.0e-45 189.5 817 29.1
Gorai.004G000600 Gossypium raimondii HOM05D007641 ORTHO05D007630 4.4e-44 184.1 843 27.2
TAR633G1590 Trochodendron aralioides HOM05D007641 ORTHO05D007630 5.7e-44 183.7 358 38.3
FvH4_3g40550 Fragaria vesca HOM05D007641 ORTHO05D007630 7.5e-44 183.3 724 29.3
Gohir.A08G000032 Gossypium hirsutum HOM05D007641 ORTHO05D007630 1.1e-42 179.5 842 28.3
FAN25G3378 Fragaria x ananassa HOM05D007641 ORTHO05D007630 1.8e-42 178.7 725 29.2
Migut.D00817 Erythranthe guttata HOM05D007641 ORTHO05D007630 4.5e-41 174.1 504 30.2
FAN16G1217 Fragaria x ananassa HOM05D007641 ORTHO05D007630 6.5e-40 170.2 693 29.1
Glyma.18G052000 Glycine max HOM05D007641 ORTHO05D007630 6.5e-40 170.2 788 26.6
TAR636G3352 Trochodendron aralioides HOM05D007641 ORTHO05D007630 7.2e-39 166.8 405 32.8
Phvul.006G079400 Phaseolus vulgaris HOM05D007641 ORTHO05D007630 1.2e-38 166.0 803 27.9
ClCG02G019020 Citrullus lanatus HOM05D007641 ORTHO05D007630 1.6e-38 165.6 801 26.6
Duzib168G1492 Durio zibethinus HOM05D007641 ORTHO05D007630 2.1e-38 165.2 875 25.9
Sopen09g001120 Solanum pennellii HOM05D014625 ORTHO05D007630 1.0e-37 162.9 525 31.8
Gohir.D08G007350 Gossypium hirsutum HOM05D007641 ORTHO05D007630 2.3e-37 161.8 839 26.8
Hma1.2p1_0119F.1_g056956 Hydrangea macrophylla HOM05D007641 ORTHO05D007630 6.8e-37 160.2 510 30.4
Psat5g147960 Pisum sativum HOM05D007641 ORTHO05D007630 2.2e-35 155.2 527 30.6
FAN11G1956 Fragaria x ananassa HOM05D007641 ORTHO05D007630 3.7e-35 154.5 670 28.1
Sed0007856 Sechium edule HOM05D007641 ORTHO05D007630 1.1e-34 152.9 674 28.5
Solyc09g005140.2 Solanum lycopersicum HOM05D014625 ORTHO05D007630 7.0e-34 150.2 531 31.5
HanXRQChr08g0230341 Helianthus annuus HOM05D007641 ORTHO05D007630 5.0e-32 144.1 627 27.9
Os01g0167700 Oryza sativa ssp. japonica HOM05D052079 ORTHO05D007630 5.0e-32 144.1 503 27.8
Sc23g0005090 Simmondsia chinensis HOM05D007641 ORTHO05D007630 8.6e-32 143.3 846 27.0
Cpa.g.sc2.293 Carica papaya HOM05D007641 ORTHO05D007630 1.1e-31 142.9 373 34.0
PSO017G1347 Papaver somniferum HOM05D007641 ORTHO05D007630 3.3e-31 141.4 418 31.6
Sp4g13010 Schrenkiella parvula HOM05D001940 ORTHO05D007630 4.3e-31 141.0 614 27.5
MELO3C019578.2 Cucumis melo HOM05D007641 ORTHO05D007630 4.7e-30 137.5 679 27.2
Prupe.6G040800 Prunus persica HOM05D007641 ORTHO05D007630 4.7e-30 137.5 710 26.5
Carub.0004s1164 Capsella rubella HOM05D001940 ORTHO05D007630 1.4e-29 136.0 615 29.3
Peaxi162Scf00605g00515 Petunia axillaris HOM05D014625 ORTHO05D007630 1.4e-29 136.0 450 28.0
Gorai.012G000300 Gossypium raimondii HOM05D007641 ORTHO05D007630 2.3e-29 135.2 517 30.0
VMungo0540G0343 Vigna mungo HOM05D007641 ORTHO05D007630 2.0e-28 132.1 514 28.8
Gohir.1Z049529 Gossypium hirsutum HOM05D007641 ORTHO05D007630 3.4e-28 131.3 400 30.8
SGA_v2.0_scaffold20G09288 Striga asiatica HOM05D007641 ORTHO05D007630 4.4e-28 131.0 476 29.2
CsaV3_6G013130 Cucumis sativus L. HOM05D007641 ORTHO05D007630 4.9e-27 127.5 674 26.9
Lalb_Chr18g0054201 Lupinus albus HOM05D007641 ORTHO05D007630 4.9e-27 127.5 546 26.0
GSVIVG01024555001 Vitis vinifera HOM05D007641 ORTHO05D007630 1.1e-26 126.3 261 37.9
ECA247G3209 Erigeron canadensis HOM05D007641 ORTHO05D007630 2.0e-25 122.1 328 32.3
Gohir.D12G000401 Gossypium hirsutum HOM05D007641 ORTHO05D007630 4.6e-25 120.9 642 27.9
Ciclev10004023m.g Citrus clementina HOM05D007641 ORTHO05D007630 1.9e-23 115.5 258 36.4
AT2G30480 Arabidopsis thaliana HOM05D001940 ORTHO05D007630 2.5e-23 115.2 623 27.3
THA.LOC104815825 Tarenaya hassleriana HOM05D001940 ORTHO05D007630 2.5e-23 115.2 618 26.9
AL4G25360 Arabidopsis lyrata HOM05D001940 ORTHO05D007630 9.5e-23 113.2 623 27.6
COL.COLO4_11217 Corchorus olitorius HOM05D007641 ORTHO05D007630 2.1e-22 112.1 619 23.7
TPR.G13882 Trifolium pratense HOM05D007641 ORTHO05D007630 2.8e-22 111.7 540 26.9
Hund18459 Selenicereus undatus HOM05D029401 ORTHO05D007630 4.7e-22 110.9 506 26.9
BcaB02g10326 Brassica carinata HOM05D001940 ORTHO05D007630 1.5e-20 105.9 587 27.1
Lj6g0005873 Lotus japonicus HOM05D007641 ORTHO05D007630 5.8e-20 104.0 487 27.9
Ca_15061_v3 Cicer arietinum L. HOM05D007641 ORTHO05D007630 9.8e-20 103.2 295 31.9
Lsat_1_v5_gn_9_13760 Lactuca sativa HOM05D007641 ORTHO05D007630 1.3e-19 102.8 345 31.9
arahy.Tifrunner.gnm1.ann1.4PHV2I Arachis hypogaea HOM05D007641 ORTHO05D007630 1.7e-19 102.4 633 23.2
AUR62001158 Chenopodium quinoa HOM05D029401 ORTHO05D007630 3.7e-19 101.3 475 26.7
Oeu064683.1 Olea europaea HOM05D007641 ORTHO05D007630 1.1e-18 99.8 576 26.4
HPP92_015425 Vanilla planifolia HOM05D007641 ORTHO05D007630 1.4e-18 99.4 697 24.4
Zm00001eb336420 Zea mays HOM05D052079 ORTHO05D007630 5.4e-18 97.4 508 24.6
BcaC02g11137 Brassica carinata HOM05D001940 ORTHO05D007630 2.0e-17 95.5 592 27.4
Thhalv10017756m.g Eutrema salsugineum HOM05D001940 ORTHO05D007630 4.6e-17 94.4 409 29.6
Gorai.002G184200 Gossypium raimondii HOM05D007641 ORTHO05D007630 1.3e-16 92.8 177 36.2
Medtr3g467390 Medicago truncatula HOM05D007641 ORTHO05D007630 3.0e-16 91.7 426 25.6
Nitab4.5_0001868g0030 Nicotiana tabacum HOM05D014625 ORTHO05D007630 7.3e-15 87.0 269 30.1
DCAR_018642 Daucus carota HOM05D007641 ORTHO05D007630 9.5e-15 86.7 114 44.7
A05p14980 Brassica napus HOM05D001940 ORTHO05D007630 1.2e-14 86.3 589 26.3
C04p20070 Brassica napus HOM05D001940 ORTHO05D007630 6.2e-14 84.0 625 25.8
BolC4t23545H Brassica oleracea HOM05D001940 ORTHO05D007630 1.1e-13 83.2 409 28.4
Glyma.11G198150 Glycine max HOM05D007641 ORTHO05D007630 1.5e-12 79.3 175 32.0
Nitab4.5_0000002g0280 Nicotiana tabacum HOM05D014625 ORTHO05D007630 2.0e-12 79.0 487 23.8
AUR62016518 Chenopodium quinoa HOM05D029401 ORTHO05D007630 4.4e-12 77.8 290 28.6
PGR102G3245 Punica granatum HOM05D007641 ORTHO05D007630 5.8e-12 77.4 432 25.7
Ah.08g218910 Amaranthus hybridus HOM05D000020 ORTHO05D002192 2.9e-11 75.1 269 27.1
arahy.Tifrunner.gnm1.ann1.F8RHVN Arachis hypogaea HOM05D007641 ORTHO05D007630 1.4e-10 72.8 581 22.4
Ciclev10001550m.g Citrus clementina HOM05D007641 ORTHO05D007630 1.9e-10 72.4 353 27.8
ATR1127G234 Amborella trichopoda HOM05D007641 ORTHO05D007630 4.1e-10 71.2 267 27.0
PSO384G0550 Papaver somniferum HOM05D007641 ORTHO05D007630 5.4e-10 70.9 69 58.0
CSS0002773 Camellia sinensis var. sinensis HOM05D024992 ORTHO05D022110 7.8e-09 67.0 102 44.1
CARHR123930 Cardamine hirsuta HOM05D001940 ORTHO05D007630 8.6e-08 63.5 94 40.4
BraA05t20424Z Brassica rapa HOM05D001940 ORTHO05D007630 1.9e-07 62.4 408 27.5
Gohir.D01G148301 Gossypium hirsutum HOM05D007641 ORTHO05D007630 4.3e-07 61.2 172 30.2
TAR636G0755 Trochodendron aralioides HOM05D007641 ORTHO05D007630 6.2e-06 57.4 131 37.4


User provided reference genes

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