Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G01249 Aquilegia oxysepala HOM05D003701 ORTHO05D004771 6.1e-247 857.1 440 100.0
TAR633G1876 Trochodendron aralioides HOM05D003701 ORTHO05D004771 3.0e-201 705.3 414 83.8
TAR623G1268 Trochodendron aralioides HOM05D003701 ORTHO05D004771 6.2e-199 697.6 414 83.6
Dinv11780 Davidia involucrata HOM05D003701 ORTHO05D004771 2.6e-197 692.2 414 82.1
Thecc.10G072600 Theobroma cacao HOM05D003701 ORTHO05D004771 8.4e-196 687.2 416 81.2
Atru.chr12.740 Acer truncatum HOM05D003701 ORTHO05D004771 2.4e-195 685.6 436 78.2
Gohir.A10G206500 Gossypium hirsutum HOM05D003701 ORTHO05D004771 1.2e-194 683.3 435 78.9
Gohir.D05G297000 Gossypium hirsutum HOM05D003701 ORTHO05D004771 3.5e-194 681.8 437 78.3
Gorai.009G314200 Gossypium raimondii HOM05D003701 ORTHO05D004771 3.5e-194 681.8 437 78.3
Gohir.D10G214600 Gossypium hirsutum HOM05D003701 ORTHO05D004771 4.6e-194 681.4 435 78.9
Hund12041 Selenicereus undatus HOM05D003701 ORTHO05D004771 4.6e-194 681.4 414 81.2
PSO063G5795 Papaver somniferum HOM05D003701 ORTHO05D004771 6.0e-194 681.0 404 82.4
Sc06g0004590 Simmondsia chinensis HOM05D003701 ORTHO05D004771 6.0e-194 681.0 414 80.0
CSS0025729 Camellia sinensis var. sinensis HOM05D003701 ORTHO05D004771 7.8e-194 680.6 436 78.2
PSO339G3023 Papaver somniferum HOM05D003701 ORTHO05D004771 7.8e-194 680.6 422 79.9
Ciclev10031547m.g Citrus clementina HOM05D003701 ORTHO05D004771 1.0e-193 680.2 411 81.0
Gohir.A05G297100 Gossypium hirsutum HOM05D003701 ORTHO05D004771 1.0e-193 680.2 437 77.8
Glyma.20G179500 Glycine max HOM05D003701 ORTHO05D004771 3.0e-193 678.7 434 79.0
Potri.010G221600 Populus trichocarpa HOM05D003701 ORTHO05D004771 3.0e-193 678.7 438 78.3
Potri.008G040700 Populus trichocarpa HOM05D003701 ORTHO05D004771 5.1e-193 677.9 438 77.6
Sc09g0006470 Simmondsia chinensis HOM05D003701 ORTHO05D004771 8.7e-193 677.2 430 78.6
arahy.Tifrunner.gnm1.ann1.X76XU5 Arachis hypogaea HOM05D003701 ORTHO05D004771 1.5e-192 676.4 434 78.6
Duzib106G0278 Durio zibethinus HOM05D003701 ORTHO05D004771 1.5e-192 676.4 437 77.6
CiPaw.02G174300 Carya illinoinensis HOM05D003701 ORTHO05D004771 1.9e-192 676.0 410 82.0
VMungo0720G1162 Vigna mungo HOM05D003701 ORTHO05D004771 2.5e-192 675.6 434 79.3
Manes.10G045200 Manihot esculenta HOM05D003701 ORTHO05D004771 3.3e-192 675.2 436 77.3
arahy.Tifrunner.gnm1.ann1.V7IKH4 Arachis hypogaea HOM05D003701 ORTHO05D004771 7.3e-192 674.1 434 78.3
Gorai.011G240200 Gossypium raimondii HOM05D003701 ORTHO05D004771 9.6e-192 673.7 393 83.2
Nn2g13085 Nelumbo nucifera HOM05D003701 ORTHO05D004771 2.4e-190 669.1 420 79.5
Ah.06g192010 Amaranthus hybridus HOM05D003701 ORTHO05D004771 5.3e-190 667.9 436 75.9
Lj5g0008768 Lotus japonicus HOM05D003701 ORTHO05D004771 9.0e-190 667.2 427 78.0
Lsat_1_v5_gn_2_114381 Lactuca sativa HOM05D003701 ORTHO05D004771 3.4e-189 665.2 436 76.8
Sabra08G0027700 Salix brachista HOM05D003701 ORTHO05D004771 3.4e-189 665.2 442 76.7
GSVIVG01016288001 Vitis vinifera HOM05D003701 ORTHO05D004771 3.4e-189 665.2 429 77.9
HanXRQChr15g0496661 Helianthus annuus HOM05D003701 ORTHO05D004771 4.4e-189 664.8 438 77.2
Phvul.007G094200 Phaseolus vulgaris HOM05D003701 ORTHO05D004771 4.4e-189 664.8 427 78.9
HanXRQChr09g0249701 Helianthus annuus HOM05D003701 ORTHO05D004771 9.9e-189 663.7 438 76.7
Hma1.2p1_1004F.1_g246800 Hydrangea macrophylla HOM05D003701 ORTHO05D004771 1.3e-188 663.3 414 79.5
QL08p056106 Quercus lobata HOM05D003701 ORTHO05D004771 1.7e-188 662.9 437 76.7
SGA_v2.0_scaffold51G18675 Striga asiatica HOM05D003701 ORTHO05D004771 2.2e-188 662.5 408 79.9
Cpa.g.sc53.71 Carica papaya HOM05D003701 ORTHO05D004771 3.8e-188 661.8 453 75.3
Nitab4.5_0005490g0010 Nicotiana tabacum HOM05D003701 ORTHO05D004771 3.8e-188 661.8 415 78.6
AUR62041045 Chenopodium quinoa HOM05D003701 ORTHO05D004771 4.9e-188 661.4 435 76.8
Glyma.10G211400 Glycine max HOM05D003701 ORTHO05D004771 4.9e-188 661.4 432 76.4
THA.LOC104827296 Tarenaya hassleriana HOM05D003701 ORTHO05D004771 4.9e-188 661.4 433 77.1
BcaC05g27549 Brassica carinata HOM05D003701 ORTHO05D004771 8.4e-188 660.6 426 77.2
C05p35350 Brassica napus HOM05D003701 ORTHO05D004771 8.4e-188 660.6 426 77.2
BolC5t32248H Brassica oleracea HOM05D003701 ORTHO05D004771 8.4e-188 660.6 426 77.2
Peaxi162Scf00747g00122 Petunia axillaris HOM05D003701 ORTHO05D004771 8.4e-188 660.6 433 76.7
MSTRG.8153 Avicennia marina HOM05D003701 ORTHO05D004771 1.4e-187 659.8 406 79.3
CARHR038850 Cardamine hirsuta HOM05D003701 ORTHO05D004771 1.9e-187 659.4 439 75.4
TWI74G0111 Tripterygium wilfordii HOM05D003701 ORTHO05D004771 1.9e-187 659.4 413 78.7
TWI74G0263 Tripterygium wilfordii HOM05D003701 ORTHO05D004771 1.9e-187 659.4 413 78.7
Lalb_Chr02g0142141 Lupinus albus HOM05D003701 ORTHO05D004771 2.4e-187 659.1 410 79.3
TPR.G1904 Trifolium pratense HOM05D003701 ORTHO05D004771 2.4e-187 659.1 404 80.2
AUR62037661 Chenopodium quinoa HOM05D003701 ORTHO05D004771 3.2e-187 658.7 455 74.1
Ca_10573_v3 Cicer arietinum L. HOM05D003701 ORTHO05D004771 3.2e-187 658.7 426 78.2
Ca_29596_v3 Cicer arietinum L. HOM05D003701 ORTHO05D004771 3.2e-187 658.7 426 78.2
Thhalv10011486m.g Eutrema salsugineum HOM05D003701 ORTHO05D004771 3.2e-187 658.7 425 77.4
FAN03G0046 Fragaria x ananassa HOM05D003701 ORTHO05D004771 4.2e-187 658.3 429 78.8
PGSC0003DMG400024392 Solanum tuberosum HOM05D003701 ORTHO05D004771 4.2e-187 658.3 409 78.2
A08p04400 Brassica napus HOM05D003701 ORTHO05D004771 5.4e-187 657.9 426 77.2
Solyc04g049350.4 Solanum lycopersicum HOM05D003701 ORTHO05D004771 7.1e-187 657.5 427 76.6
BraA08t32466Z Brassica rapa HOM05D003701 ORTHO05D004771 1.2e-186 656.8 426 77.0
AT1G48850 Arabidopsis thaliana HOM05D003701 ORTHO05D004771 1.6e-186 656.4 431 76.3
MSTRG.367 Avicennia marina HOM05D003701 ORTHO05D004771 1.6e-186 656.4 429 76.2
MBI10_g04889_MAGBIO Magnolia biondii HOM05D003701 ORTHO05D004771 1.6e-186 656.4 428 77.3
A05p20860 Brassica napus HOM05D003701 ORTHO05D004771 2.1e-186 656.0 426 76.8
BolC8t47272H Brassica oleracea HOM05D003701 ORTHO05D004771 2.1e-186 656.0 426 77.0
BraA05t20991Z Brassica rapa HOM05D003701 ORTHO05D004771 2.1e-186 656.0 426 76.8
MD01G1108900 Malus domestica HOM05D003701 ORTHO05D004771 2.1e-186 656.0 421 77.7
C08p04710 Brassica napus HOM05D003701 ORTHO05D004771 2.7e-186 655.6 426 77.0
CsaV3_6G036360 Cucumis sativus L. HOM05D003701 ORTHO05D004771 2.7e-186 655.6 428 77.3
DCAR_015315 Daucus carota HOM05D003701 ORTHO05D004771 2.7e-186 655.6 437 77.6
Migut.F01774 Erythranthe guttata HOM05D003701 ORTHO05D004771 2.7e-186 655.6 435 74.5
Sp1g35740 Schrenkiella parvula HOM05D003701 ORTHO05D004771 2.7e-186 655.6 426 77.0
Sopen04g019270 Solanum pennellii HOM05D003701 ORTHO05D004771 2.7e-186 655.6 427 76.6
BcaC07g37102 Brassica carinata HOM05D003701 ORTHO05D004771 3.5e-186 655.2 426 77.0
FvH4_7g19670 Fragaria vesca HOM05D003701 ORTHO05D004771 3.5e-186 655.2 429 78.6
BcaB04g17381 Brassica carinata HOM05D003701 ORTHO05D004771 4.6e-186 654.8 427 76.8
Gorai.011G240100 Gossypium raimondii HOM05D003701 ORTHO05D004771 6.0e-186 654.4 435 75.4
Medtr1g095250 Medicago truncatula HOM05D003701 ORTHO05D004771 7.8e-186 654.1 405 80.5
AL1G55580 Arabidopsis lyrata HOM05D003701 ORTHO05D004771 1.0e-185 653.7 429 76.2
FAN06G0474 Fragaria x ananassa HOM05D003701 ORTHO05D004771 1.0e-185 653.7 429 78.3
CAN.G186.45 Capsicum annuum HOM05D003701 ORTHO05D004771 1.3e-185 653.3 436 74.8
MELO3C019790.2 Cucumis melo HOM05D003701 ORTHO05D004771 1.7e-185 652.9 428 77.3
Lalb_Chr06g0162271 Lupinus albus HOM05D003701 ORTHO05D004771 2.3e-185 652.5 434 76.5
BcaB02g11304 Brassica carinata HOM05D003701 ORTHO05D004771 5.1e-185 651.4 405 78.3
PGSC0003DMG400016016 Solanum tuberosum HOM05D003701 ORTHO05D004771 5.1e-185 651.4 426 76.3
Sopen04g004770 Solanum pennellii HOM05D003701 ORTHO05D004771 6.6e-185 651.0 433 74.8
FAN10G2919 Fragaria x ananassa HOM05D003701 ORTHO05D004771 8.7e-185 650.6 429 78.1
Carub.0001s3800 Capsella rubella HOM05D003701 ORTHO05D004771 1.1e-184 650.2 426 76.5
Gohir.A10G206400 Gossypium hirsutum HOM05D003701 ORTHO05D004771 1.5e-184 649.8 438 74.2
ClCG08G007450 Citrullus lanatus HOM05D003701 ORTHO05D004771 3.3e-184 648.7 428 76.4
Actinidia38848 Actinidia chinensis HOM05D003701 ORTHO05D004771 4.3e-184 648.3 435 74.5
CDE04G2332 Ceratophyllum demersum HOM05D003701 ORTHO05D004771 7.3e-184 647.5 410 78.5
Sabra10G0171500 Salix brachista HOM05D003701 ORTHO05D004771 7.3e-184 647.5 487 70.2
ATR0115G006 Amborella trichopoda HOM05D003701 ORTHO05D004771 9.6e-184 647.1 404 79.5
Nitab4.5_0001029g0070 Nicotiana tabacum HOM05D003701 ORTHO05D004771 1.3e-183 646.7 425 75.8
RcHm_v2.0_Chr1g0363491 Rosa chinensis HOM05D003701 ORTHO05D004771 1.3e-183 646.7 430 77.4
Solyc04g009620.4 Solanum lycopersicum HOM05D003701 ORTHO05D004771 1.6e-183 646.4 433 74.8
Aa31LG10G4830 Aethionema arabicum HOM05D003701 ORTHO05D004771 2.8e-183 645.6 430 75.3
ECA232G2521 Erigeron canadensis HOM05D003701 ORTHO05D004771 3.6e-183 645.2 396 79.0
MBI02_g43493_MAGBIO Magnolia biondii HOM05D003701 ORTHO05D004771 3.6e-183 645.2 417 78.4
arahy.Tifrunner.gnm1.ann1.6FL4NC Arachis hypogaea HOM05D003701 ORTHO05D004771 1.4e-182 643.3 434 74.0
Eucgr.G02824 Eucalyptus grandis HOM05D003701 ORTHO05D004771 2.4e-182 642.5 427 76.6
EL10Ac2g03249 Beta vulgaris HOM05D003701 ORTHO05D004771 4.0e-182 641.7 438 74.4
CANSAT56G3258 Cannabis sativa HOM05D003701 ORTHO05D004771 5.3e-182 641.3 429 74.4
MD07G1175200 Malus domestica HOM05D003701 ORTHO05D004771 1.5e-181 639.8 420 77.4
Actinidia03057 Actinidia chinensis HOM05D003701 ORTHO05D004771 2.6e-181 639.0 400 77.5
Sed0016616 Sechium edule HOM05D003701 ORTHO05D004771 4.5e-181 638.3 423 75.7
Lj1A914T43 Lonicera japonica HOM05D003701 ORTHO05D004771 1.7e-180 636.3 429 76.5
vmacro04876 Vaccinium macrocarpon HOM05D003701 ORTHO05D004771 3.2e-179 632.1 529 63.1
SEGI_31492 Sequoiadendron giganteum HOM05D003701 ORTHO05D004771 5.4e-179 631.3 404 78.0
HPP92_012666 Vanilla planifolia HOM05D003701 ORTHO05D004771 1.6e-178 629.8 414 76.6
Os03g0254800 Oryza sativa ssp. japonica HOM05D003701 ORTHO05D004771 2.1e-178 629.4 405 75.3
FAN01G1080 Fragaria x ananassa HOM05D003701 ORTHO05D004771 6.0e-178 627.9 468 71.4
unitig_899.g14441 Utricularia gibba HOM05D003701 ORTHO05D004771 1.3e-177 626.7 397 77.6
PGR142G1908 Punica granatum HOM05D003701 ORTHO05D004771 2.3e-177 625.9 435 72.6
Rhsim09G0152400 Rhododendron simsii HOM05D003701 ORTHO05D004771 5.1e-177 624.8 520 64.4
FAN10G2344 Fragaria x ananassa HOM05D003701 ORTHO05D004771 1.3e-175 620.2 429 75.8
AagrBONN_evm.TU.Sc2ySwM_369.393 Anthoceros agrestis HOM05D003701 ORTHO05D004771 1.8e-174 616.3 397 79.8
Duzib114G1041 Durio zibethinus HOM05D003701 ORTHO05D004771 2.4e-174 615.9 441 72.1
Migut.F01773 Erythranthe guttata HOM05D003701 ORTHO05D004771 5.3e-174 614.8 403 75.4
CSS0011231 Camellia sinensis var. sinensis HOM05D003701 ORTHO05D004771 4.5e-173 611.7 423 73.3
Mapoly0007s0052 Marchantia polymorpha HOM05D003701 ORTHO05D004771 7.6e-173 610.9 385 78.7
SMO146G0105 Selaginella moellendorffii HOM05D003701 ORTHO05D004771 4.2e-171 605.1 398 76.1
SalBow4G1339 Salvia bowleyana HOM05D003701 ORTHO05D004771 9.3e-171 604.0 404 73.8
Gohir.D05G297025 Gossypium hirsutum HOM05D003701 ORTHO05D004771 2.7e-170 602.4 428 73.4
DCAR_012659 Daucus carota HOM05D003701 ORTHO05D004771 1.1e-168 597.0 394 74.4
GSVIVG01025176001 Vitis vinifera HOM05D003701 ORTHO05D004771 1.4e-166 590.1 387 73.9
arahy.Tifrunner.gnm1.ann1.914CGH Arachis hypogaea HOM05D003701 ORTHO05D004771 1.9e-163 579.7 341 81.5
CAN.G186.44 Capsicum annuum HOM05D003701 ORTHO05D004771 2.5e-163 579.3 382 72.0
CiPaw.01G273500 Carya illinoinensis HOM05D003701 ORTHO05D004771 1.1e-158 563.9 344 81.4
Psat6g184400 Pisum sativum HOM05D003701 ORTHO05D004771 9.0e-158 560.8 338 82.0
Oeu007390.4 Olea europaea HOM05D003701 ORTHO05D004771 6.1e-154 548.1 342 79.5
Prupe.2G214400 Prunus persica HOM05D003701 ORTHO05D004771 7.9e-154 547.7 338 81.4
Oeu027479.1 Olea europaea HOM05D003701 ORTHO05D004771 3.9e-153 545.4 353 77.6
Dinv31329 Davidia involucrata HOM05D003701 ORTHO05D004771 1.1e-150 537.3 346 77.5
Zm00001eb011020 Zea mays HOM05D003701 ORTHO05D004771 1.2e-149 533.9 333 79.0
CANSAT78G2428 Cannabis sativa HOM05D003701 ORTHO05D004771 9.4e-147 524.2 390 66.9
unitig_736.g22517 Utricularia gibba HOM05D003701 ORTHO05D004771 8.8e-145 517.7 392 67.1
Cre03.g145747 Chlamydomonas reinhardtii HOM05D003701 ORTHO05D004771 1.7e-143 513.5 379 68.6
PRCOL_00001179 Prasinoderma coloniale HOM05D003701 ORTHO05D004771 2.4e-142 509.6 389 67.4
CDE07G1562 Ceratophyllum demersum HOM05D003701 ORTHO05D004771 5.3e-142 508.4 410 65.4
MCO05G587 Micromonas commoda HOM05D003701 ORTHO05D004771 2.6e-141 506.1 372 68.0
Eucgr.J01090 Eucalyptus grandis HOM05D003701 ORTHO05D004771 2.3e-137 493.0 348 72.4
COL.COLO4_23690 Corchorus olitorius HOM05D003701 ORTHO05D004771 2.8e-127 459.5 260 85.0
Zm00001eb398410 Zea mays HOM05D003701 ORTHO05D004771 4.5e-125 452.2 329 68.1
Pp3c1_35940 Physcomitrium patens HOM05D003701 ORTHO05D004771 8.8e-121 438.0 277 79.1
COL.COLO4_23691 Corchorus olitorius HOM05D003701 ORTHO05D004771 3.5e-117 426.0 269 78.4
CBR_g41627 Chara braunii HOM05D003701 ORTHO05D004771 2.0e-112 410.2 284 72.5
Haze_16899 Corylus avellana HOM05D003701 ORTHO05D004771 3.3e-107 392.9 233 84.1
Gohir.D10G214532 Gossypium hirsutum HOM05D003701 ORTHO05D004771 1.6e-93 347.4 219 77.2
Cc09_g02040 Coffea canephora HOM05D003701 ORTHO05D004771 3.4e-88 329.7 188 85.1
Haze_27259 Corylus avellana HOM05D003701 ORTHO05D004771 7.8e-85 318.5 367 46.3
Cc09_g02030 Coffea canephora HOM05D003701 ORTHO05D004771 5.6e-83 312.4 228 69.7
Gohir.D10G214466 Gossypium hirsutum HOM05D003701 ORTHO05D004771 1.4e-81 307.8 191 78.5
Cfa022484 Carpinus fangiana HOM05D003701 ORTHO05D004771 6.0e-77 292.4 350 49.7
SHI12194 Sapria himalayana HOM05D003666 ORTHO05D004770 3.0e-68 263.5 154 80.5
TAR636G0034 Trochodendron aralioides HOM05D003701 ORTHO05D004771 6.2e-66 255.8 188 68.1
TAR636G0416 Trochodendron aralioides HOM05D003701 ORTHO05D004771 6.2e-66 255.8 188 68.1
MSTRG.366 Avicennia marina HOM05D003701 ORTHO05D004771 1.2e-61 241.5 146 80.1
RcHm_v2.0_Chr4g0427911 Rosa chinensis HOM05D003701 ORTHO05D004771 9.0e-57 225.3 221 59.3
FAN12G0728 Fragaria x ananassa HOM05D003701 ORTHO05D004771 1.3e-52 211.5 244 53.3
MD01G1109200 Malus domestica HOM05D003701 ORTHO05D004771 7.2e-38 162.5 113 68.1
Glyma.14G185633 Glycine max HOM05D003701 ORTHO05D004771 2.7e-37 160.6 100 79.0
SMO173G0015 Selaginella moellendorffii HOM05D003701 ORTHO05D004771 6.5e-31 139.4 220 45.5
FAN17G1952 Fragaria x ananassa HOM05D003701 ORTHO05D004771 1.4e-25 121.7 297 36.7
QL07p006097 Quercus lobata HOM05D003701 ORTHO05D030296 2.9e-23 114.0 82 70.7
Oeu052763.1 Olea europaea HOM05D003701 ORTHO05D030296 3.2e-22 110.5 60 91.7
FAN01G1877 Fragaria x ananassa HOM05D003701 ORTHO05D208017 1.5e-19 101.7 87 67.8
VMungo0647G0194 Vigna mungo HOM05D003701 ORTHO05D432816 4.4e-19 100.1 82 63.4
QL07p006183 Quercus lobata HOM05D003701 ORTHO05D030296 4.8e-18 96.7 63 77.8
QL09p045974 Quercus lobata HOM05D003701 ORTHO05D030296 4.8e-18 96.7 63 77.8
FAN12G0587 Fragaria x ananassa HOM05D003701 ORTHO05D004771 7.0e-17 92.8 90 54.4
Medtr0368s0020 Medicago truncatula HOM05D003701 ORTHO05D026922 1.9e-14 84.7 49 79.6
Oeu043945.1 Olea europaea HOM05D003701 ORTHO05D004771 1.6e-13 81.6 45 82.2
Glyma.14G185666 Glycine max HOM05D003701 ORTHO05D026922 1.8e-12 78.2 47 80.9
Aqoxy1G03520 Aquilegia oxysepala HOM05D004873 ORTHO05D006122 6.8e-12 76.3 48 93.8
Actinidia38274 Actinidia chinensis HOM05D003701 ORTHO05D012924 2.7e-08 64.3 44 63.6
BolC2t09870H Brassica oleracea HOM05D003701 ORTHO05D041413 1.1e-06 58.9 74 43.2
CBR_g74262 Chara braunii HOM05D003701 ORTHO05D004771 1.1e-06 58.9 43 65.1
C02p38530 Brassica napus HOM05D003701 ORTHO05D101262 1.9e-06 58.2 74 40.5
MBI09_g06128_MAGBIO Magnolia biondii HOM05D018637 ORTHO05D012924 1.9e-06 58.2 43 55.8
Rhsim05G0028600 Rhododendron simsii HOM05D000745 ORTHO05D000641 2.5e-06 57.8 28 82.1


User provided reference genes

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