Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G01243 Aquilegia oxysepala HOM05D004188 ORTHO05D004445 4.8e-49 198.0 136 100.0
Lj2g0024305 Lotus japonicus HOM05D004188 ORTHO05D004445 2.2e-09 66.2 73 50.7
Actinidia03061 Actinidia chinensis HOM05D004188 ORTHO05D004445 2.8e-09 65.9 76 48.7
Medtr3g049390 Medicago truncatula HOM05D004188 ORTHO05D004445 1.1e-08 63.9 56 58.9
VMungo1127G1131 Vigna mungo HOM05D000847 ORTHO05D003278 4.1e-08 62.0 52 61.5
Manes.07G101000 Manihot esculenta HOM05D004188 ORTHO05D004445 1.2e-07 60.5 50 56.0
arahy.Tifrunner.gnm1.ann1.H0Z3H2 Arachis hypogaea HOM05D004188 ORTHO05D004445 2.0e-07 59.7 56 55.4
DCAR_006440 Daucus carota HOM05D004188 ORTHO05D004445 2.0e-07 59.7 80 46.2
MBI07_g19312_MAGBIO Magnolia biondii HOM05D004188 ORTHO05D004445 2.0e-07 59.7 53 58.5
Phvul.011G078900 Phaseolus vulgaris HOM05D004188 ORTHO05D004445 2.0e-07 59.7 50 62.0
MELO3C012432.2 Cucumis melo HOM05D004188 ORTHO05D004445 2.6e-07 59.3 51 60.8
Dinv31327 Davidia involucrata HOM05D001979 ORTHO05D001961 4.5e-07 58.5 47 66.0
Psat5g183560 Pisum sativum HOM05D004188 ORTHO05D004445 4.5e-07 58.5 56 51.8
Cfa011320 Carpinus fangiana HOM05D004188 ORTHO05D004445 7.7e-07 57.8 51 58.8
MBI10_g41700_MAGBIO Magnolia biondii HOM05D004188 ORTHO05D004445 7.7e-07 57.8 58 53.4
Manes.04G021600 Manihot esculenta HOM05D004188 ORTHO05D004445 7.7e-07 57.8 81 48.1
Prupe.6G101100 Prunus persica HOM05D004188 ORTHO05D004445 7.7e-07 57.8 50 54.0
arahy.Tifrunner.gnm1.ann1.70MDEI Arachis hypogaea HOM05D004188 ORTHO05D004445 1.0e-06 57.4 58 53.4
arahy.Tifrunner.gnm1.ann1.P4NYDW Arachis hypogaea HOM05D004188 ORTHO05D004445 1.0e-06 57.4 58 53.4
Prupe.2G214100 Prunus persica HOM05D004188 ORTHO05D004445 1.3e-06 57.0 47 57.4
Sed0015663 Sechium edule HOM05D004188 ORTHO05D004445 1.3e-06 57.0 57 52.6
DCAR_006441 Daucus carota HOM05D004188 ORTHO05D004445 2.2e-06 56.2 50 52.0
Glyma.11G146900 Glycine max HOM05D004188 ORTHO05D004445 2.2e-06 56.2 54 57.4
CiPaw.14G080400 Carya illinoinensis HOM05D004188 ORTHO05D004445 2.9e-06 55.8 50 54.0
ECA238G3112 Erigeron canadensis HOM05D004188 ORTHO05D004445 2.9e-06 55.8 49 57.1
ClCG02G021140 Citrullus lanatus HOM05D004188 ORTHO05D004445 3.8e-06 55.5 57 49.1
CsaV3_6G013900 Cucumis sativus L. HOM05D004188 ORTHO05D004445 3.8e-06 55.5 50 56.0
Glyma.12G067800 Glycine max HOM05D004188 ORTHO05D004445 3.8e-06 55.5 54 55.6
QL08p056015 Quercus lobata HOM05D007562 ORTHO05D009721 3.8e-06 55.5 87 43.7
TWI75G1406 Tripterygium wilfordii HOM05D004188 ORTHO05D004445 3.8e-06 55.5 50 54.0
MELO3C025771.2 Cucumis melo HOM05D004188 ORTHO05D004445 5.0e-06 55.1 50 56.0
DCAR_006061 Daucus carota HOM05D004188 ORTHO05D004445 5.0e-06 55.1 49 57.1
ECA233G4889 Erigeron canadensis HOM05D004188 ORTHO05D004445 8.5e-06 54.3 50 56.0
Sabra09G0008000 Salix brachista HOM05D004188 ORTHO05D004445 8.5e-06 54.3 50 52.0


User provided reference genes

Program Settings