Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G01237 Aquilegia oxysepala HOM05D005728 ORTHO05D005733 4.7e-65 251.1 136 100.0
CiPaw.13G113100 Carya illinoinensis HOM05D005728 ORTHO05D005733 9.3e-29 130.6 142 55.6
TAR629G0455 Trochodendron aralioides HOM05D005728 ORTHO05D005733 1.6e-28 129.8 141 56.7
Hma1.2p1_0058F.1_g032530 Hydrangea macrophylla HOM05D005728 ORTHO05D005733 1.0e-27 127.1 138 55.1
Duzib150G0774 Durio zibethinus HOM05D005728 ORTHO05D005733 5.1e-27 124.8 134 53.7
Haze_23825 Corylus avellana HOM05D005728 ORTHO05D005733 5.7e-26 121.3 137 53.3
Duzib168G0076 Durio zibethinus HOM05D005728 ORTHO05D005733 5.7e-26 121.3 139 53.2
MD03G1117800 Malus domestica HOM05D005728 ORTHO05D005733 9.7e-26 120.6 142 52.8
Nn2g10793 Nelumbo nucifera HOM05D005728 ORTHO05D005733 1.3e-25 120.2 146 53.4
Gohir.D05G102800 Gossypium hirsutum HOM05D005728 ORTHO05D005733 1.6e-25 119.8 136 52.9
Potri.004G211000 Populus trichocarpa HOM05D005728 ORTHO05D005733 2.8e-25 119.0 142 48.6
Thecc.09G340800 Theobroma cacao HOM05D005728 ORTHO05D005733 3.7e-25 118.6 142 48.6
Gorai.009G107100 Gossypium raimondii HOM05D005728 ORTHO05D005733 8.2e-25 117.5 136 52.2
QL01p022229 Quercus lobata HOM05D005728 ORTHO05D005733 1.8e-24 116.3 132 53.0
FvH4_3g32270 Fragaria vesca HOM05D005728 ORTHO05D005733 6.9e-24 114.4 142 50.0
FAN11G0683 Fragaria x ananassa HOM05D005728 ORTHO05D005733 6.9e-24 114.4 142 50.0
FAN16G2914 Fragaria x ananassa HOM05D005728 ORTHO05D005733 6.9e-24 114.4 142 50.0
PSO063G1604 Papaver somniferum HOM05D005728 ORTHO05D005733 6.9e-24 114.4 150 49.3
Gohir.A05G103100 Gossypium hirsutum HOM05D005728 ORTHO05D005733 2.0e-23 112.8 135 48.9
FAN25G2087 Fragaria x ananassa HOM05D005728 ORTHO05D005733 2.6e-23 112.5 142 49.3
RcHm_v2.0_Chr5g0059071 Rosa chinensis HOM05D005728 ORTHO05D005733 2.6e-23 112.5 142 50.7
MELO3C020692.2 Cucumis melo HOM05D005728 ORTHO05D005733 4.5e-23 111.7 142 50.7
Eucgr.B02498 Eucalyptus grandis HOM05D005728 ORTHO05D005733 4.5e-23 111.7 137 48.2
PSO339G2100 Papaver somniferum HOM05D005728 ORTHO05D005733 4.5e-23 111.7 150 48.7
Potri.009G013800 Populus trichocarpa HOM05D005728 ORTHO05D005733 4.5e-23 111.7 145 49.0
Cfa011317 Carpinus fangiana HOM05D005728 ORTHO05D005733 1.0e-22 110.5 137 51.1
FAN21G3175 Fragaria x ananassa HOM05D005728 ORTHO05D005733 1.0e-22 110.5 142 49.3
MBI07_g19310_MAGBIO Magnolia biondii HOM05D005728 ORTHO05D005733 2.2e-22 109.4 153 49.0
Sed0004216 Sechium edule HOM05D005728 ORTHO05D005733 2.2e-22 109.4 136 50.0
TWI79G1513 Tripterygium wilfordii HOM05D005728 ORTHO05D005733 2.9e-22 109.0 137 48.9
CSS0032457 Camellia sinensis var. sinensis HOM05D005728 ORTHO05D005733 3.8e-22 108.6 130 49.2
TWI31G0058 Tripterygium wilfordii HOM05D005728 ORTHO05D005733 6.5e-22 107.8 148 49.3
Prupe.6G101500 Prunus persica HOM05D005728 ORTHO05D005733 4.2e-21 105.1 140 45.7
Rhsim01G0216600 Rhododendron simsii HOM05D005728 ORTHO05D005733 9.4e-21 104.0 138 45.7
CsaV3_1G033730 Cucumis sativus L. HOM05D005728 ORTHO05D005733 1.6e-20 103.2 142 47.2
Ciclev10029550m.g Citrus clementina HOM05D005728 ORTHO05D005733 3.6e-20 102.1 141 44.0
Nitab4.5_0012712g0010 Nicotiana tabacum HOM05D005728 ORTHO05D005733 3.6e-20 102.1 142 45.1
MD11G1136100 Malus domestica HOM05D005728 ORTHO05D005733 7.9e-20 100.9 142 46.5
Cpa.g.sc216.7 Carica papaya HOM05D005728 ORTHO05D005733 1.0e-19 100.5 142 45.8
Lalb_Chr14g0374671 Lupinus albus HOM05D005728 ORTHO05D005733 1.4e-19 100.1 136 47.8
Nitab4.5_0000650g0250 Nicotiana tabacum HOM05D005728 ORTHO05D005733 1.8e-19 99.8 137 46.0
PGR102G3095 Punica granatum HOM05D005728 ORTHO05D005733 3.0e-19 99.0 133 44.4
Sabra04G0142500 Salix brachista HOM05D005728 ORTHO05D005733 3.0e-19 99.0 144 42.4
THA.LOC104800607 Tarenaya hassleriana HOM05D005728 ORTHO05D005733 5.1e-19 98.2 139 44.6
Gohir.D03G134400 Gossypium hirsutum HOM05D005728 ORTHO05D005733 8.8e-19 97.4 130 46.9
Sed0003209 Sechium edule HOM05D005728 ORTHO05D005733 8.8e-19 97.4 140 46.4
Psat5g279440 Pisum sativum HOM05D005728 ORTHO05D005733 1.5e-18 96.7 142 46.5
DCAR_018811 Daucus carota HOM05D005728 ORTHO05D005733 3.3e-18 95.5 142 43.0
Gohir.A03G033900 Gossypium hirsutum HOM05D005728 ORTHO05D005733 3.3e-18 95.5 130 46.9
Manes.04G021300 Manihot esculenta HOM05D005728 ORTHO05D005733 3.3e-18 95.5 142 43.0
Peaxi162Scf00270g00082 Petunia axillaris HOM05D005728 ORTHO05D005733 3.3e-18 95.5 143 44.8
HanXRQChr01g0016901 Helianthus annuus HOM05D005728 ORTHO05D005733 4.3e-18 95.1 140 43.6
Atru.chr3.3629 Acer truncatum HOM05D005728 ORTHO05D005733 7.4e-18 94.4 145 44.1
CANSAT54G0421 Cannabis sativa HOM05D005728 ORTHO05D005733 9.7e-18 94.0 141 46.1
Ca_01413_v3 Cicer arietinum L. HOM05D005728 ORTHO05D005733 9.7e-18 94.0 130 43.8
Gohir.D08G215300 Gossypium hirsutum HOM05D005728 ORTHO05D005733 9.7e-18 94.0 130 45.4
Cc01_g11120 Coffea canephora HOM05D005728 ORTHO05D005733 1.3e-17 93.6 138 44.9
PGSC0003DMG400008077 Solanum tuberosum HOM05D005728 ORTHO05D005733 2.8e-17 92.4 140 43.6
Glyma.12G067500 Glycine max HOM05D005728 ORTHO05D005733 3.7e-17 92.0 131 44.3
Glyma.12G172600 Glycine max HOM05D005728 ORTHO05D005733 3.7e-17 92.0 138 42.8
MBI10_g13404_MAGBIO Magnolia biondii HOM05D005728 ORTHO05D005733 3.7e-17 92.0 150 46.0
arahy.Tifrunner.gnm1.ann1.X5FS8C Arachis hypogaea HOM05D005728 ORTHO05D005733 4.8e-17 91.7 140 42.1
Gorai.004G228900 Gossypium raimondii HOM05D005728 ORTHO05D005733 4.8e-17 91.7 130 44.6
Lsat_1_v5_gn_1_65300 Lactuca sativa HOM05D005728 ORTHO05D005733 4.8e-17 91.7 133 41.4
Glyma.11G146600 Glycine max HOM05D005728 ORTHO05D005733 6.3e-17 91.3 131 43.5
Phvul.011G079200 Phaseolus vulgaris HOM05D005728 ORTHO05D005733 6.3e-17 91.3 131 39.7
Solyc11g069420.2 Solanum lycopersicum HOM05D005728 ORTHO05D005733 6.3e-17 91.3 136 40.4
Sopen11g028140 Solanum pennellii HOM05D005728 ORTHO05D005733 6.3e-17 91.3 136 40.4
TPR.G11537 Trifolium pratense HOM05D005728 ORTHO05D005733 8.2e-17 90.9 132 43.2
EL10Ac9g22516 Beta vulgaris HOM05D005728 ORTHO05D005733 1.1e-16 90.5 130 43.1
Gohir.A08G197900 Gossypium hirsutum HOM05D005728 ORTHO05D005733 1.1e-16 90.5 134 44.0
Medtr2g094210 Medicago truncatula HOM05D005728 ORTHO05D005733 1.4e-16 90.1 142 44.4
Medtr4g059310 Medicago truncatula HOM05D005728 ORTHO05D005733 1.4e-16 90.1 122 41.0
Phvul.005G135400 Phaseolus vulgaris HOM05D005728 ORTHO05D005733 5.3e-16 88.2 140 41.4
ECA248G1213 Erigeron canadensis HOM05D005728 ORTHO05D005733 6.9e-16 87.8 138 41.3
Duzib170G0319 Durio zibethinus HOM05D005728 ORTHO05D005733 1.7e-14 83.2 110 46.4
VMungo0403G0001 Vigna mungo HOM05D005728 ORTHO05D005733 1.7e-14 83.2 134 38.8
VMungo1080G1182 Vigna mungo HOM05D005728 ORTHO05D005733 8.5e-14 80.9 125 43.2
Ca_19255_v3 Cicer arietinum L. HOM05D005728 ORTHO05D005733 1.1e-13 80.5 132 34.8
Glyma.13G326000 Glycine max HOM05D005728 ORTHO05D005733 2.5e-13 79.3 129 41.1
TPR.G15560 Trifolium pratense HOM05D005728 ORTHO05D005733 3.2e-13 79.0 125 38.4
Lalb_Chr19g0137271 Lupinus albus HOM05D005728 ORTHO05D005733 5.5e-13 78.2 135 40.0
Sabra09G0007800 Salix brachista HOM05D005728 ORTHO05D005733 9.4e-13 77.4 140 36.4
MSTRG.17803 Avicennia marina HOM05D005728 ORTHO05D005733 1.6e-12 76.6 128 39.8
Manes.11G145200 Manihot esculenta HOM05D005728 ORTHO05D005733 1.6e-12 76.6 123 44.7
ATR0048G010 Amborella trichopoda HOM05D005728 ORTHO05D005733 4.7e-12 75.1 136 39.0
AUR62024979 Chenopodium quinoa HOM05D005728 ORTHO05D005733 6.1e-12 74.7 142 37.3
Lj3g0009869 Lotus japonicus HOM05D005728 ORTHO05D005733 6.1e-12 74.7 132 38.6
Psat7g225080 Pisum sativum HOM05D005728 ORTHO05D005733 7.9e-12 74.3 126 38.9
Oeu059090.1 Olea europaea HOM05D005728 ORTHO05D005733 1.0e-11 73.9 135 40.0
ECA238G1730 Erigeron canadensis HOM05D005728 ORTHO05D005733 1.4e-11 73.6 134 38.1
AUR62039639 Chenopodium quinoa HOM05D005728 ORTHO05D005733 1.8e-11 73.2 142 39.4
RhsimUnG0058600 Rhododendron simsii HOM05D005728 ORTHO05D005733 2.3e-11 72.8 106 43.4
Sc15g0002200 Simmondsia chinensis HOM05D005728 ORTHO05D005733 2.3e-11 72.8 134 38.1
Rhsim01G0216400 Rhododendron simsii HOM05D005728 ORTHO05D005733 3.0e-11 72.4 105 42.9
Ah.01g002910 Amaranthus hybridus HOM05D005728 ORTHO05D005733 3.9e-11 72.0 138 37.7
AL4G21610 Arabidopsis lyrata HOM05D005728 ORTHO05D005733 5.1e-11 71.6 114 43.9
Thhalv10017443m.g Eutrema salsugineum HOM05D005728 ORTHO05D005733 6.7e-11 71.2 108 43.5
BolC4t23791H Brassica oleracea HOM05D005728 ORTHO05D005733 1.1e-10 70.5 110 43.6
Hma1.2p1_2468F.1_g322665 Hydrangea macrophylla HOM05D005728 ORTHO05D005733 1.1e-10 70.5 113 46.9
Nitab4.5_0000106g0140 Nicotiana tabacum HOM05D005728 ORTHO05D005733 1.5e-10 70.1 149 38.3
A07p18980 Brassica napus HOM05D005728 ORTHO05D005733 2.6e-10 69.3 110 43.6
C04p22970 Brassica napus HOM05D005728 ORTHO05D005733 2.6e-10 69.3 110 42.7
BraA07t29603Z Brassica rapa HOM05D005728 ORTHO05D005733 2.6e-10 69.3 110 43.6
BcaB06g28212 Brassica carinata HOM05D005728 ORTHO05D005733 3.3e-10 68.9 108 44.4
BcaB08g36363 Brassica carinata HOM05D010860 ORTHO05D005733 4.4e-10 68.6 151 37.1
Thhalv10014945m.g Eutrema salsugineum HOM05D010860 ORTHO05D005733 5.7e-10 68.2 148 34.5
Hma1.2p1_0055F.1_g031560 Hydrangea macrophylla HOM05D005728 ORTHO05D005733 5.7e-10 68.2 121 46.3
Aa31LG5G7800 Aethionema arabicum HOM05D005728 ORTHO05D005733 9.7e-10 67.4 101 46.5
A03p11060 Brassica napus HOM05D010860 ORTHO05D005733 9.7e-10 67.4 142 37.3
BraA03t10420Z Brassica rapa HOM05D010860 ORTHO05D005733 9.7e-10 67.4 142 37.3
AT2G28410 Arabidopsis thaliana HOM05D005728 ORTHO05D005733 2.2e-09 66.2 114 41.2
arahy.Tifrunner.gnm1.ann1.5L1A31 Arachis hypogaea HOM05D005728 ORTHO05D005733 2.2e-09 66.2 137 35.0
CARHR121360 Cardamine hirsuta HOM05D005728 ORTHO05D005733 2.8e-09 65.9 117 45.3
A04p21550 Brassica napus HOM05D005728 ORTHO05D005733 3.7e-09 65.5 108 43.5
BraA04t17719Z Brassica rapa HOM05D005728 ORTHO05D005733 3.7e-09 65.5 108 43.5
SalBow3G4069 Salvia bowleyana HOM05D005728 ORTHO05D005733 4.8e-09 65.1 139 37.4
SalBow3G1069 Salvia bowleyana HOM05D005728 ORTHO05D005733 8.2e-09 64.3 124 37.9
Sp4g11230 Schrenkiella parvula HOM05D005728 ORTHO05D005733 8.2e-09 64.3 118 36.4
A10p17850 Brassica napus HOM05D010860 ORTHO05D005733 1.1e-08 63.9 149 34.9
CiPaw.14G080700 Carya illinoinensis HOM05D005728 ORTHO05D005733 1.1e-08 63.9 112 43.8
Carub.0004s0935 Capsella rubella HOM05D005728 ORTHO05D005733 1.8e-08 63.2 120 37.5
Lj3g0014252 Lotus japonicus HOM05D005728 ORTHO05D005733 2.4e-08 62.8 111 36.0
BcaC02g08173 Brassica carinata HOM05D005728 ORTHO05D005733 4.1e-08 62.0 114 41.2
C04p57650 Brassica napus HOM05D005728 ORTHO05D005733 4.1e-08 62.0 114 41.2
BolC4t27283H Brassica oleracea HOM05D005728 ORTHO05D005733 5.3e-08 61.6 114 41.2
Migut.N02604 Erythranthe guttata HOM05D005728 ORTHO05D005733 5.3e-08 61.6 129 34.9
SGA_v2.0_scaffold2G00890 Striga asiatica HOM05D005728 ORTHO05D005733 5.3e-08 61.6 125 34.4
AT5G60650 Arabidopsis thaliana HOM05D010860 ORTHO05D005733 9.1e-08 60.8 148 31.8
C09p53380 Brassica napus HOM05D010860 ORTHO05D005733 9.1e-08 60.8 140 35.7
Peaxi162Scf00101g00083 Petunia axillaris HOM05D005728 ORTHO05D005733 2.0e-07 59.7 141 33.3
BcaB01g04667 Brassica carinata HOM05D010860 ORTHO05D005733 3.4e-07 58.9 140 35.0
AL8G37240 Arabidopsis lyrata HOM05D010860 ORTHO05D005733 5.9e-07 58.2 129 31.8
Carub.0008s2133 Capsella rubella HOM05D010860 ORTHO05D005733 5.9e-07 58.2 152 28.9
CARHR274330 Cardamine hirsuta HOM05D010860 ORTHO05D005733 5.9e-07 58.2 148 31.1
Ah.01g014340 Amaranthus hybridus HOM05D005728 ORTHO05D005733 1.0e-06 57.4 131 33.6
Gorai.003G141500 Gossypium raimondii HOM05D005728 ORTHO05D005733 1.0e-06 57.4 102 43.1
BolC9t58211H Brassica oleracea HOM05D010860 ORTHO05D005733 1.7e-06 56.6 140 34.3
CAN.G1001.28 Capsicum annuum HOM05D003943 ORTHO05D005733 1.7e-06 56.6 106 36.8
BcaC04g19726 Brassica carinata HOM05D010860 ORTHO05D005733 8.5e-06 54.3 140 33.6


User provided reference genes

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