Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G01195 Aquilegia oxysepala HOM05D004945 ORTHO05D005536 7.8e-48 193.4 91 100.0
Aqoxy7G02794 Aquilegia oxysepala HOM05D004945 ORTHO05D005536 2.8e-37 158.3 92 82.6
Hma1.2p1_0517F.1_g170730 Hydrangea macrophylla HOM05D004945 ORTHO05D005536 2.8e-37 158.3 91 82.4
TAR625G1304 Trochodendron aralioides HOM05D004945 ORTHO05D005536 8.1e-37 156.8 91 78.0
Actinidia38805 Actinidia chinensis HOM05D004945 ORTHO05D005536 3.1e-36 154.8 91 76.9
MELO3C017430.2 Cucumis melo HOM05D004945 ORTHO05D005536 3.1e-36 154.8 91 78.0
CSS0028266 Camellia sinensis var. sinensis HOM05D004945 ORTHO05D005536 5.3e-36 154.1 91 78.0
CiPaw.09G075900 Carya illinoinensis HOM05D004945 ORTHO05D005536 2.0e-35 152.1 88 79.5
TAR636G3350 Trochodendron aralioides HOM05D004945 ORTHO05D005536 2.6e-35 151.8 91 74.7
PGR142G1282 Punica granatum HOM05D004945 ORTHO05D005536 4.5e-35 151.0 91 75.8
Cpa.g.sc95.12 Carica papaya HOM05D004945 ORTHO05D005536 5.8e-35 150.6 91 75.8
Prupe.1G075600 Prunus persica HOM05D004945 ORTHO05D005536 5.8e-35 150.6 88 77.3
CiPaw.10G063900 Carya illinoinensis HOM05D004945 ORTHO05D005536 7.6e-35 150.2 93 77.4
COL.COLO4_08559 Corchorus olitorius HOM05D004945 ORTHO05D005536 7.6e-35 150.2 91 73.6
QL11p013920 Quercus lobata HOM05D004945 ORTHO05D005536 7.6e-35 150.2 90 75.6
COL.COLO4_22793 Corchorus olitorius HOM05D004945 ORTHO05D005536 9.9e-35 149.8 91 73.6
QL11p014429 Quercus lobata HOM05D004945 ORTHO05D005536 9.9e-35 149.8 90 74.4
Haze_06091 Corylus avellana HOM05D004945 ORTHO05D005536 1.3e-34 149.4 93 73.1
Sed0015624 Sechium edule HOM05D004945 ORTHO05D005536 1.7e-34 149.1 91 74.7
Sed0005101 Sechium edule HOM05D004945 ORTHO05D005536 2.2e-34 148.7 91 74.7
CsaV3_1G031860 Cucumis sativus L. HOM05D004945 ORTHO05D005536 2.9e-34 148.3 91 74.7
CANSAT11G0762 Cannabis sativa HOM05D004945 ORTHO05D005536 6.4e-34 147.1 88 73.9
ClCG06G013580 Citrullus lanatus HOM05D004945 ORTHO05D005536 1.1e-33 146.4 91 72.5
MD13G1241900 Malus domestica HOM05D004945 ORTHO05D005536 1.9e-33 145.6 88 75.0
THA.LOC104820006 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 2.4e-33 145.2 91 72.5
Thecc.09G185900 Theobroma cacao HOM05D004945 ORTHO05D005536 3.2e-33 144.8 91 72.5
ATR0626G412 Amborella trichopoda HOM05D004945 ORTHO05D005536 4.2e-33 144.4 90 75.6
Ciclev10010043m.g Citrus clementina HOM05D004945 ORTHO05D005536 7.1e-33 143.7 88 72.7
THA.LOC104803956 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 7.1e-33 143.7 91 72.5
THA.LOC104803979 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 7.1e-33 143.7 91 72.5
MD07G1027600 Malus domestica HOM05D004945 ORTHO05D005536 9.3e-33 143.3 88 73.9
Potri.018G142500 Populus trichocarpa HOM05D004945 ORTHO05D005536 9.3e-33 143.3 91 71.4
Rhsim08G0249700 Rhododendron simsii HOM05D004945 ORTHO05D005536 9.3e-33 143.3 90 73.3
TWI63G0641 Tripterygium wilfordii HOM05D004945 ORTHO05D005536 1.2e-32 142.9 89 71.9
Manes.06G020000 Manihot esculenta HOM05D004945 ORTHO05D005536 4.6e-32 141.0 88 71.6
Potri.006G075600 Populus trichocarpa HOM05D004945 ORTHO05D005536 6.0e-32 140.6 91 67.0
TWI34G0510 Tripterygium wilfordii HOM05D004945 ORTHO05D005536 7.9e-32 140.2 89 69.7
Hma1.2p1_1111F.1_g258380 Hydrangea macrophylla HOM05D004945 ORTHO05D005536 1.0e-31 139.8 92 73.9
DCAR_007670 Daucus carota HOM05D004945 ORTHO05D005536 1.3e-31 139.4 91 71.4
BcaB03g12628 Brassica carinata HOM05D004945 ORTHO05D005536 1.8e-31 139.0 91 69.2
CAN.G308.14 Capsicum annuum HOM05D004945 ORTHO05D005536 1.8e-31 139.0 91 74.7
RcHm_v2.0_Chr4g0399651 Rosa chinensis HOM05D004945 ORTHO05D005536 1.8e-31 139.0 88 71.6
FvH4_4g07310 Fragaria vesca HOM05D004945 ORTHO05D005536 3.9e-31 137.9 86 72.1
Duzib150G1578 Durio zibethinus HOM05D004945 ORTHO05D005536 6.7e-31 137.1 91 68.1
Solyc06g063310.2 Solanum lycopersicum HOM05D004945 ORTHO05D005536 6.7e-31 137.1 91 72.5
Sopen06g022780 Solanum pennellii HOM05D004945 ORTHO05D005536 6.7e-31 137.1 91 72.5
THA.LOC104814658 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 6.7e-31 137.1 91 70.3
BcaC01g01207 Brassica carinata HOM05D004945 ORTHO05D005536 8.7e-31 136.7 91 68.1
A08p19460 Brassica napus HOM05D004945 ORTHO05D005536 8.7e-31 136.7 91 68.1
C03p88960 Brassica napus HOM05D004945 ORTHO05D005536 8.7e-31 136.7 91 68.1
BolC3t21206H Brassica oleracea HOM05D004945 ORTHO05D005536 8.7e-31 136.7 91 68.1
BraA08t33908Z Brassica rapa HOM05D004945 ORTHO05D005536 8.7e-31 136.7 91 68.1
Eucgr.C00118 Eucalyptus grandis HOM05D004945 ORTHO05D005536 8.7e-31 136.7 89 67.4
A03p59370 Brassica napus HOM05D004945 ORTHO05D005536 1.1e-30 136.3 91 69.2
C07p57400 Brassica napus HOM05D004945 ORTHO05D005536 1.1e-30 136.3 91 69.2
BolC7t46209H Brassica oleracea HOM05D004945 ORTHO05D005536 1.1e-30 136.3 91 69.2
BraA03t14994Z Brassica rapa HOM05D004945 ORTHO05D005536 1.1e-30 136.3 91 69.2
Migut.D00890 Erythranthe guttata HOM05D004945 ORTHO05D005536 1.1e-30 136.3 87 69.0
Sabra18G0116400 Salix brachista HOM05D004945 ORTHO05D005536 1.1e-30 136.3 88 69.3
FAN07G0945 Fragaria x ananassa HOM05D004945 ORTHO05D005536 1.5e-30 136.0 86 72.1
Gohir.D08G028100 Gossypium hirsutum HOM05D004945 ORTHO05D005536 1.5e-30 136.0 91 67.0
Atru.chr7.757 Acer truncatum HOM05D004945 ORTHO05D005536 1.9e-30 135.6 87 70.1
Atru.chr7.779 Acer truncatum HOM05D004945 ORTHO05D005536 1.9e-30 135.6 87 70.1
Duzib150G0603 Durio zibethinus HOM05D004945 ORTHO05D005536 2.5e-30 135.2 91 65.9
Gohir.A13G208500 Gossypium hirsutum HOM05D004945 ORTHO05D005536 2.5e-30 135.2 91 64.8
Nitab4.5_0003757g0090 Nicotiana tabacum HOM05D004945 ORTHO05D005536 3.3e-30 134.8 91 71.4
Sp7g27810 Schrenkiella parvula HOM05D004945 ORTHO05D005536 3.3e-30 134.8 91 67.0
PGSC0003DMG400026503 Solanum tuberosum HOM05D004945 ORTHO05D005536 3.3e-30 134.8 91 71.4
Gohir.D13G212800 Gossypium hirsutum HOM05D004945 ORTHO05D005536 4.3e-30 134.4 91 64.8
Gorai.013G243200 Gossypium raimondii HOM05D004945 ORTHO05D005536 4.3e-30 134.4 91 64.8
BcaNung00508 Brassica carinata HOM05D004945 ORTHO05D005536 5.6e-30 134.0 91 67.0
CARHR237930 Cardamine hirsuta HOM05D004945 ORTHO05D005536 5.6e-30 134.0 91 67.0
Gorai.004G025200 Gossypium raimondii HOM05D004945 ORTHO05D005536 5.6e-30 134.0 91 65.9
Cc04_g00230 Coffea canephora HOM05D004945 ORTHO05D005536 7.4e-30 133.7 87 67.8
Gohir.D13G212900 Gossypium hirsutum HOM05D004945 ORTHO05D005536 7.4e-30 133.7 91 63.7
PSO063G0987 Papaver somniferum HOM05D004945 ORTHO05D005536 7.4e-30 133.7 88 69.3
PSO170G0997 Papaver somniferum HOM05D004945 ORTHO05D005536 7.4e-30 133.7 88 69.3
Lsat_1_v5_gn_1_39460 Lactuca sativa HOM05D004945 ORTHO05D005536 9.6e-30 133.3 91 64.8
Carub.0007s1064 Capsella rubella HOM05D004945 ORTHO05D005536 1.3e-29 132.9 91 67.0
Gohir.A13G208400 Gossypium hirsutum HOM05D004945 ORTHO05D005536 1.3e-29 132.9 91 63.7
Sc12g0011140 Simmondsia chinensis HOM05D004945 ORTHO05D005536 1.3e-29 132.9 91 69.2
Thhalv10026677m.g Eutrema salsugineum HOM05D004945 ORTHO05D005536 1.6e-29 132.5 91 67.0
arahy.Tifrunner.gnm1.ann1.M8DR4H Arachis hypogaea HOM05D004945 ORTHO05D005536 2.1e-29 132.1 91 67.0
arahy.Tifrunner.gnm1.ann1.ZYC9F0 Arachis hypogaea HOM05D004945 ORTHO05D005536 2.1e-29 132.1 91 67.0
SHI03058 Sapria himalayana HOM05D004945 ORTHO05D005536 2.1e-29 132.1 93 64.5
AL7G22230 Arabidopsis lyrata HOM05D004945 ORTHO05D005536 3.7e-29 131.3 91 65.9
Glyma.15G165900 Glycine max HOM05D004945 ORTHO05D005536 3.7e-29 131.3 88 65.9
QL11p013931 Quercus lobata HOM05D004945 ORTHO05D005536 3.7e-29 131.3 90 66.7
Migut.I01191 Erythranthe guttata HOM05D004945 ORTHO05D005536 4.8e-29 131.0 91 68.1
Gohir.A08G017500 Gossypium hirsutum HOM05D004945 ORTHO05D005536 6.2e-29 130.6 91 64.8
Sc15g0001010 Simmondsia chinensis HOM05D004945 ORTHO05D005536 1.1e-28 129.8 89 67.4
AT4G30010 Arabidopsis thaliana HOM05D004945 ORTHO05D005536 1.4e-28 129.4 91 63.7
QL11p014451 Quercus lobata HOM05D004945 ORTHO05D005536 5.3e-28 127.5 90 64.4
Glyma.09G059600 Glycine max HOM05D004945 ORTHO05D005536 6.9e-28 127.1 88 64.8
Phvul.007G156600 Phaseolus vulgaris HOM05D004945 ORTHO05D005536 6.9e-28 127.1 87 62.1
unitig_748.g8030 Utricularia gibba HOM05D004945 ORTHO05D005536 6.9e-28 127.1 91 67.0
unitig_32.g11008 Utricularia gibba HOM05D004945 ORTHO05D005536 9.0e-28 126.7 89 66.3
TPR.G7575 Trifolium pratense HOM05D004945 ORTHO05D005536 3.4e-27 124.8 87 64.4
Lj6g0012502 Lotus japonicus HOM05D004945 ORTHO05D005536 4.5e-27 124.4 88 65.9
Aa31LG2G20550 Aethionema arabicum HOM05D004945 ORTHO05D005536 7.6e-27 123.6 88 63.6
Ca_02105_v3 Cicer arietinum L. HOM05D004945 ORTHO05D005536 2.2e-26 122.1 87 64.4
CDE04G2745 Ceratophyllum demersum HOM05D004945 ORTHO05D005536 4.9e-26 120.9 82 64.6
Lalb_Chr11g0074741 Lupinus albus HOM05D004945 ORTHO05D005536 4.9e-26 120.9 89 61.8
Medtr2g037990 Medicago truncatula HOM05D004945 ORTHO05D005536 5.5e-25 117.5 87 62.1
Psat1g144160 Pisum sativum HOM05D004945 ORTHO05D005536 7.1e-25 117.1 87 59.8
Ah.13g075140 Amaranthus hybridus HOM05D004945 ORTHO05D005536 9.3e-25 116.7 88 62.5
Ah.04g153390 Amaranthus hybridus HOM05D004945 ORTHO05D005536 3.5e-24 114.8 88 61.4
THA.LOC104811777 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 3.5e-24 114.8 90 57.8
Psat1g144120 Pisum sativum HOM05D004945 ORTHO05D005536 4.6e-24 114.4 87 59.8
MD10G1108200 Malus domestica HOM05D004945 ORTHO05D005536 1.3e-23 112.8 88 63.6
AUR62030327 Chenopodium quinoa HOM05D004945 ORTHO05D005536 5.1e-23 110.9 85 60.0
ECA247G2100 Erigeron canadensis HOM05D004945 ORTHO05D005536 8.7e-23 110.2 91 57.1
Dinv25512 Davidia involucrata HOM05D004945 ORTHO05D005536 1.1e-22 109.8 66 75.8
AUR62018340 Chenopodium quinoa HOM05D004945 ORTHO05D005536 1.5e-22 109.4 88 58.0
AUR62044702 Chenopodium quinoa HOM05D004945 ORTHO05D005536 1.5e-22 109.4 88 58.0
AUR62044703 Chenopodium quinoa HOM05D004945 ORTHO05D005536 1.5e-22 109.4 88 58.0
AUR62031980 Chenopodium quinoa HOM05D004945 ORTHO05D005536 1.9e-22 109.0 82 59.8
EL10Ac3g07227 Beta vulgaris HOM05D004945 ORTHO05D005536 3.3e-22 108.2 88 55.7
THA.LOC109116878 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 5.7e-22 107.5 61 78.7
AUR62023991 Chenopodium quinoa HOM05D004945 ORTHO05D005536 1.6e-21 105.9 88 55.7
A01p08110 Brassica napus HOM05D004945 ORTHO05D005536 3.1e-20 101.7 83 57.8
Os02g0175800 Oryza sativa ssp. japonica HOM05D004945 ORTHO05D005536 1.2e-19 99.8 88 51.1
Nitab4.5_0000617g0120 Nicotiana tabacum HOM05D004945 ORTHO05D005536 1.7e-18 95.9 68 58.8
PGSC0003DMG400028757 Solanum tuberosum HOM05D004945 ORTHO05D005536 2.7e-16 88.6 57 66.7
BcaB03g15243 Brassica carinata HOM05D004945 ORTHO05D005536 2.3e-15 85.5 75 52.0
arahy.Tifrunner.gnm1.ann1.2FH55K Arachis hypogaea HOM05D004945 ORTHO05D005536 3.0e-15 85.1 58 63.8
arahy.Tifrunner.gnm1.ann1.U71V3Q Arachis hypogaea HOM05D004945 ORTHO05D005536 1.9e-14 82.4 57 63.2
HanXRQChr15g0497481 Helianthus annuus HOM05D004945 ORTHO05D005536 3.3e-14 81.6 90 46.7
Nitab4.5_0006750g0010 Nicotiana tabacum HOM05D004945 ORTHO05D005536 4.8e-13 77.8 57 56.1
SMO361G0023 Selaginella moellendorffii HOM05D004945 ORTHO05D005536 1.8e-12 75.9 85 38.8
Oeu001819.1 Olea europaea HOM05D004945 ORTHO05D005536 9.1e-12 73.6 78 47.4
GSVIVG01010862001 Vitis vinifera HOM05D004945 ORTHO05D005536 8.5e-10 67.0 56 58.9
Nitab4.5_0002354g0060 Nicotiana tabacum HOM05D004945 ORTHO05D005536 3.2e-09 65.1 45 64.4
BcaC09g51779 Brassica carinata HOM05D004945 ORTHO05D005536 4.2e-09 64.7 69 46.4
BcaNung06654 Brassica carinata HOM05D004945 ORTHO05D005536 4.2e-09 64.7 69 46.4
Nn8g40786 Nelumbo nucifera HOM05D004945 ORTHO05D005536 2.1e-08 62.4 43 60.5
Dinv24096 Davidia involucrata HOM05D019947 ORTHO05D005536 1.0e-07 60.1 43 62.8
Dinv44937 Davidia involucrata HOM05D004945 ORTHO05D005536 1.0e-07 60.1 43 62.8
MCO09G227 Micromonas commoda HOM05D004945 ORTHO05D005536 1.0e-07 60.1 86 34.9
CBR_g50842 Chara braunii HOM05D004945 ORTHO05D005536 2.6e-06 55.5 74 39.2
Pp3c5_15650 Physcomitrium patens HOM05D004945 ORTHO05D005536 3.3e-06 55.1 86 33.7
Mapoly0011s0061 Marchantia polymorpha HOM05D004945 ORTHO05D005536 9.7e-06 53.5 89 33.7


User provided reference genes

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