Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G01163 Aquilegia oxysepala HOM05D005747 ORTHO05D007159 6.0e-55 217.2 107 100.0
arahy.Tifrunner.gnm1.ann1.548B55 Arachis hypogaea HOM05D005747 ORTHO05D007159 6.8e-43 177.2 105 79.0
arahy.Tifrunner.gnm1.ann1.GC88CS Arachis hypogaea HOM05D005747 ORTHO05D007159 8.9e-43 176.8 105 78.1
arahy.Tifrunner.gnm1.ann1.47U1LD Arachis hypogaea HOM05D005747 ORTHO05D007159 1.5e-42 176.0 105 78.1
Actinidia28901 Actinidia chinensis HOM05D005747 ORTHO05D007159 2.0e-42 175.6 105 78.1
arahy.Tifrunner.gnm1.ann1.W5J3RK Arachis hypogaea HOM05D005747 ORTHO05D007159 2.6e-42 175.3 105 78.1
TWI74G1168 Tripterygium wilfordii HOM05D005747 ORTHO05D007159 4.4e-42 174.5 105 79.0
TAR369G0407 Trochodendron aralioides HOM05D005747 ORTHO05D007159 7.6e-42 173.7 107 74.8
Manes.08G009800 Manihot esculenta HOM05D005747 ORTHO05D007159 9.9e-42 173.3 105 75.2
Actinidia08777 Actinidia chinensis HOM05D005747 ORTHO05D007159 1.3e-41 172.9 105 77.1
THA.LOC104826911 Tarenaya hassleriana HOM05D005747 ORTHO05D007159 2.9e-41 171.8 105 75.2
Thecc.05G065200 Theobroma cacao HOM05D005747 ORTHO05D007159 3.8e-41 171.4 105 75.2
PSO063G6473 Papaver somniferum HOM05D005747 ORTHO05D007159 4.9e-41 171.0 107 72.0
PSO339G2391 Papaver somniferum HOM05D005747 ORTHO05D007159 4.9e-41 171.0 107 72.0
vmacro07288 Vaccinium macrocarpon HOM05D005747 ORTHO05D007159 4.9e-41 171.0 105 76.2
GSVIVG01025728001 Vitis vinifera HOM05D005747 ORTHO05D007159 8.4e-41 170.2 105 74.3
Hma1.2p1_0205F.1_g087080 Hydrangea macrophylla HOM05D005747 ORTHO05D007159 1.1e-40 169.9 104 76.0
TAR633G0139 Trochodendron aralioides HOM05D005747 ORTHO05D007159 1.1e-40 169.9 107 74.8
Eucgr.A01688 Eucalyptus grandis HOM05D005747 ORTHO05D007159 2.4e-40 168.7 105 72.4
PGR004G0006 Punica granatum HOM05D005747 ORTHO05D007159 3.2e-40 168.3 105 74.3
CARHR210000 Cardamine hirsuta HOM05D005747 ORTHO05D007159 5.4e-40 167.5 103 75.7
Prupe.6G232700 Prunus persica HOM05D005747 ORTHO05D007159 9.2e-40 166.8 105 70.5
Haze_20124 Corylus avellana HOM05D005747 ORTHO05D007159 1.2e-39 166.4 105 74.3
CSS0022084 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 1.6e-39 166.0 105 73.3
Haze_20552 Corylus avellana HOM05D005747 ORTHO05D007159 1.6e-39 166.0 105 75.2
Dinv37311 Davidia involucrata HOM05D005747 ORTHO05D007159 1.6e-39 166.0 105 74.3
Duzib128G1360 Durio zibethinus HOM05D005747 ORTHO05D007159 1.6e-39 166.0 105 72.4
AL6G12680 Arabidopsis lyrata HOM05D005747 ORTHO05D007159 2.7e-39 165.2 103 71.8
CSS0033757 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 2.7e-39 165.2 105 73.3
QL07p043606 Quercus lobata HOM05D005747 ORTHO05D007159 3.5e-39 164.9 105 73.3
Rhsim03G0092400 Rhododendron simsii HOM05D005747 ORTHO05D007159 3.5e-39 164.9 105 74.3
Aa31LG3G2310 Aethionema arabicum HOM05D005747 ORTHO05D007159 4.6e-39 164.5 105 72.4
Cfa020071 Carpinus fangiana HOM05D005747 ORTHO05D007159 4.6e-39 164.5 105 72.4
Ciclev10013173m.g Citrus clementina HOM05D005747 ORTHO05D007159 4.6e-39 164.5 105 69.5
MELO3C009353.2 Cucumis melo HOM05D005747 ORTHO05D007159 4.6e-39 164.5 105 71.4
Duzib093G2107 Durio zibethinus HOM05D005747 ORTHO05D007159 4.6e-39 164.5 105 71.4
Psat0s2933g0080 Pisum sativum HOM05D005747 ORTHO05D007159 4.6e-39 164.5 105 70.5
CANSAT80G0760 Cannabis sativa HOM05D005747 ORTHO05D007159 6.0e-39 164.1 105 74.3
CsaV3_3G035950 Cucumis sativus L. HOM05D005747 ORTHO05D007159 6.0e-39 164.1 105 72.4
Atru.chr8.1820 Acer truncatum HOM05D005747 ORTHO05D007159 7.8e-39 163.7 105 70.5
CSS0033637 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 7.8e-39 163.7 105 72.4
Thhalv10015093m.g Eutrema salsugineum HOM05D005747 ORTHO05D007159 7.8e-39 163.7 103 72.8
ClCG10G020160 Citrullus lanatus HOM05D005747 ORTHO05D007159 1.0e-38 163.3 105 71.4
MSTRG.19175 Avicennia marina HOM05D005747 ORTHO05D007159 1.3e-38 162.9 104 71.2
Lj5g0010104 Lotus japonicus HOM05D005747 ORTHO05D007159 1.3e-38 162.9 104 72.1
AT5G03345 Arabidopsis thaliana HOM05D005747 ORTHO05D007159 2.3e-38 162.2 103 70.9
Carub.0006s0216 Capsella rubella HOM05D005747 ORTHO05D007159 2.3e-38 162.2 103 69.9
FvH4_6g16280 Fragaria vesca HOM05D005747 ORTHO05D007159 2.3e-38 162.2 104 69.2
FAN14G5754 Fragaria x ananassa HOM05D005747 ORTHO05D007159 2.3e-38 162.2 104 69.2
Solyc09g008140.3 Solanum lycopersicum HOM05D005747 ORTHO05D007159 2.3e-38 162.2 105 69.5
Sopen09g002940 Solanum pennellii HOM05D005747 ORTHO05D007159 2.3e-38 162.2 105 69.5
Migut.L01698 Erythranthe guttata HOM05D005747 ORTHO05D007159 3.0e-38 161.8 105 68.6
Glyma.13G143500 Glycine max HOM05D005747 ORTHO05D007159 3.0e-38 161.8 105 70.5
TWI77G0618 Tripterygium wilfordii HOM05D005747 ORTHO05D007159 3.9e-38 161.4 105 74.3
EL10Ac1g00026 Beta vulgaris HOM05D005747 ORTHO05D007159 5.1e-38 161.0 105 71.4
Potri.006G125300 Populus trichocarpa HOM05D005747 ORTHO05D007159 5.1e-38 161.0 104 70.2
SalBow5G0179 Salvia bowleyana HOM05D005747 ORTHO05D007159 5.1e-38 161.0 105 70.5
SalBow5G1412 Salvia bowleyana HOM05D005747 ORTHO05D007159 5.1e-38 161.0 105 70.5
Medtr7g101880 Medicago truncatula HOM05D005747 ORTHO05D007159 6.6e-38 160.6 99 72.7
Nn7g38309 Nelumbo nucifera HOM05D005747 ORTHO05D007159 6.6e-38 160.6 105 73.3
Glyma.19G183500 Glycine max HOM05D005747 ORTHO05D007159 8.6e-38 160.2 105 68.6
Sp6g39390 Schrenkiella parvula HOM05D005747 ORTHO05D007159 8.6e-38 160.2 103 70.9
Sed0019850 Sechium edule HOM05D005747 ORTHO05D007159 8.6e-38 160.2 105 70.5
Cc06_g04180 Coffea canephora HOM05D005747 ORTHO05D007159 1.1e-37 159.8 105 69.5
FAN02G1695 Fragaria x ananassa HOM05D005747 ORTHO05D007159 1.1e-37 159.8 104 68.3
FAN05G2010 Fragaria x ananassa HOM05D005747 ORTHO05D007159 1.1e-37 159.8 104 69.2
Gohir.A09G147500 Gossypium hirsutum HOM05D005747 ORTHO05D007159 1.1e-37 159.8 105 71.4
Zm00001eb028740 Zea mays HOM05D005747 ORTHO05D007159 1.1e-37 159.8 105 71.4
Os12g0566400 Oryza sativa ssp. japonica HOM05D005747 ORTHO05D007159 1.5e-37 159.5 105 71.4
Peaxi162Scf00701g00029 Petunia axillaris HOM05D005747 ORTHO05D007159 1.5e-37 159.5 105 70.5
Psat6g073040 Pisum sativum HOM05D005747 ORTHO05D007159 1.5e-37 159.5 105 72.4
CAN.G900.40 Capsicum annuum HOM05D005747 ORTHO05D007159 1.9e-37 159.1 105 68.6
Gohir.D09G143100 Gossypium hirsutum HOM05D005747 ORTHO05D007159 1.9e-37 159.1 105 71.4
Gorai.006G164600 Gossypium raimondii HOM05D005747 ORTHO05D007159 1.9e-37 159.1 105 71.4
Phvul.001G178800 Phaseolus vulgaris HOM05D005747 ORTHO05D007159 1.9e-37 159.1 105 66.7
C02p00970 Brassica napus HOM05D001005 ORTHO05D000836 2.5e-37 158.7 103 70.9
Zm00001eb136890 Zea mays HOM05D005747 ORTHO05D007159 2.5e-37 158.7 104 72.1
MD12G1113800 Malus domestica HOM05D005747 ORTHO05D007159 3.3e-37 158.3 105 66.7
RcHm_v2.0_Chr3g0470141 Rosa chinensis HOM05D005747 ORTHO05D007159 3.3e-37 158.3 104 69.2
TPR.G9369 Trifolium pratense HOM05D005747 ORTHO05D007159 3.3e-37 158.3 105 70.5
BcaC03g13014 Brassica carinata HOM05D005747 ORTHO05D007159 4.3e-37 157.9 103 70.9
Glyma.10G057000 Glycine max HOM05D005747 ORTHO05D007159 4.3e-37 157.9 105 67.6
FAN09G1333 Fragaria x ananassa HOM05D005747 ORTHO05D007159 9.6e-37 156.8 104 67.3
Lalb_Chr02g0155891 Lupinus albus HOM05D005747 ORTHO05D007159 9.6e-37 156.8 104 68.3
SGA_v2.0_scaffold75G24844 Striga asiatica HOM05D005747 ORTHO05D007159 9.6e-37 156.8 103 69.9
Lalb_Chr20g0112621 Lupinus albus HOM05D005747 ORTHO05D007159 1.2e-36 156.4 105 67.6
MD04G1094200 Malus domestica HOM05D005747 ORTHO05D007159 2.8e-36 155.2 105 64.8
Ca_11494_v3 Cicer arietinum L. HOM05D005747 ORTHO05D007159 4.7e-36 154.5 105 68.6
Sc02g0001670 Simmondsia chinensis HOM05D005747 ORTHO05D007159 3.1e-35 151.8 105 67.6
TPR.G25697 Trifolium pratense HOM05D005747 ORTHO05D007159 3.1e-35 151.8 101 70.3
VMungo1383G0680 Vigna mungo HOM05D005747 ORTHO05D007159 4.0e-35 151.4 105 64.8
Medtr1g063370 Medicago truncatula HOM05D005747 ORTHO05D007159 5.2e-35 151.0 105 67.6
Phvul.007G149300 Phaseolus vulgaris HOM05D005747 ORTHO05D007159 5.2e-35 151.0 104 67.3
Manes.09G066900 Manihot esculenta HOM05D005747 ORTHO05D007159 6.9e-35 150.6 104 66.3
Potri.016G091900 Populus trichocarpa HOM05D005747 ORTHO05D007159 1.5e-34 149.4 104 65.4
Ah.05g172440 Amaranthus hybridus HOM05D005747 ORTHO05D007159 2.6e-34 148.7 105 68.6
unitig_578.g16384 Utricularia gibba HOM05D005747 ORTHO05D007159 3.4e-34 148.3 101 66.3
HPP92_009808 Vanilla planifolia HOM05D005747 ORTHO05D007159 2.9e-33 145.2 101 69.3
PGSC0003DMG400003860 Solanum tuberosum HOM05D005747 ORTHO05D007159 3.2e-32 141.7 133 53.4
ECA233G4120 Erigeron canadensis HOM05D005747 ORTHO05D007159 5.4e-32 141.0 103 62.1
HanXRQChr13g0401071 Helianthus annuus HOM05D005747 ORTHO05D007159 5.4e-32 141.0 105 60.0
Lsat_1_v5_gn_6_25181 Lactuca sativa HOM05D005747 ORTHO05D007159 1.2e-31 139.8 103 63.1
Nitab4.5_0002632g0020 Nicotiana tabacum HOM05D005747 ORTHO05D007159 4.6e-31 137.9 105 61.9
Nitab4.5_0000578g0140 Nicotiana tabacum HOM05D005747 ORTHO05D007159 7.8e-31 137.1 105 61.0
Gorai.006G061900 Gossypium raimondii HOM05D005747 ORTHO05D007159 1.9e-29 132.5 107 62.6
Glyma.03G182900 Glycine max HOM05D005747 ORTHO05D007159 2.5e-29 132.1 134 50.7
HanXRQChr02g0051611 Helianthus annuus HOM05D005747 ORTHO05D007159 4.3e-29 131.3 104 59.6
CDE06G0870 Ceratophyllum demersum HOM05D005747 ORTHO05D007159 7.3e-29 130.6 94 66.0
SEGI_15519 Sequoiadendron giganteum HOM05D005747 ORTHO05D007159 9.6e-29 130.2 93 63.4
SMO137G0056 Selaginella moellendorffii HOM05D005747 ORTHO05D007159 2.8e-28 128.6 100 59.0
Mapoly0011s0153 Marchantia polymorpha HOM05D005747 ORTHO05D007159 1.1e-27 126.7 99 59.6
Hma1.2p1_0205F.1_g087090 Hydrangea macrophylla HOM05D005747 ORTHO05D007159 3.1e-27 125.2 98 63.3
Oeu053677.1 Olea europaea HOM05D005747 ORTHO05D007159 5.8e-26 120.9 78 71.8
Hund20347 Selenicereus undatus HOM05D005747 ORTHO05D007159 1.7e-25 119.4 77 72.7
Pp3c5_16080 Physcomitrium patens HOM05D005747 ORTHO05D007159 2.2e-25 119.0 98 58.2
Pp3c6_8930 Physcomitrium patens HOM05D005747 ORTHO05D007159 4.9e-25 117.9 91 59.3
Lj2A1109T71 Lonicera japonica HOM05D005747 ORTHO05D007159 1.4e-24 116.3 91 58.2
AagrBONN_evm.TU.Sc2ySwM_362.1648 Anthoceros agrestis HOM05D005747 ORTHO05D007159 2.1e-23 112.5 81 63.0
DCAR_020822 Daucus carota HOM05D005747 ORTHO05D007159 2.1e-23 112.5 76 68.4
CSS0041044 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 8.7e-22 107.1 70 72.9
CSS0043170 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 8.7e-22 107.1 70 72.9
Oeu045224.1 Olea europaea HOM05D005747 ORTHO05D007159 3.3e-21 105.1 86 61.6
CiPaw.09G219400 Carya illinoinensis HOM05D005747 ORTHO05D007159 4.3e-21 104.8 104 53.8
Sabra16G0097500 Salix brachista HOM05D005747 ORTHO05D007159 4.3e-21 104.8 75 62.7
Sed0003931 Sechium edule HOM05D005747 ORTHO05D007159 6.2e-20 100.9 66 66.7
ATR0104G002 Amborella trichopoda HOM05D005747 ORTHO05D007159 1.4e-19 99.8 79 60.8
AUR62004704 Chenopodium quinoa HOM05D005747 ORTHO05D007159 2.0e-18 95.9 105 47.6
AUR62023620 Chenopodium quinoa HOM05D005747 ORTHO05D007159 3.4e-18 95.1 113 47.8
Lalb_Chr02g0156001 Lupinus albus HOM05D005747 ORTHO05D007159 5.1e-14 81.3 80 53.8
Dinv35784 Davidia involucrata HOM05D005747 ORTHO05D007159 2.5e-13 79.0 50 74.0
MCO03G507 Micromonas commoda HOM05D005747 ORTHO05D007159 7.4e-13 77.4 88 44.3
COL.COLO4_26972 Corchorus olitorius HOM05D005747 ORTHO05D007159 1.3e-12 76.6 45 73.3
Os11g0568633 Oryza sativa ssp. japonica HOM05D005747 ORTHO05D007159 3.8e-09 65.1 42 66.7
Lalb_Chr25g0289001 Lupinus albus HOM05D005747 ORTHO05D007159 1.6e-07 59.7 49 57.1


User provided reference genes

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