Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G01152 Aquilegia oxysepala HOM05D004439 ORTHO05D005670 6.4e-243 843.6 402 100.0
Aqoxy5G04196 Aquilegia oxysepala HOM05D004439 ORTHO05D005670 2.1e-230 802.0 402 94.8
TAR629G1063 Trochodendron aralioides HOM05D004439 ORTHO05D005670 3.0e-200 701.8 408 81.6
Gohir.D12G237200 Gossypium hirsutum HOM05D004439 ORTHO05D005670 8.7e-200 700.3 408 80.6
Gorai.008G253800 Gossypium raimondii HOM05D004439 ORTHO05D005670 8.7e-200 700.3 408 80.4
Duzib205G1996 Durio zibethinus HOM05D004439 ORTHO05D005670 4.3e-199 698.0 408 79.7
GSVIVG01019518001 Vitis vinifera HOM05D004439 ORTHO05D005670 3.7e-198 694.9 408 79.7
MBI07_g27257_MAGBIO Magnolia biondii HOM05D004439 ORTHO05D005670 3.1e-197 691.8 408 80.4
Cfa023584 Carpinus fangiana HOM05D004439 ORTHO05D005670 2.0e-196 689.1 408 79.2
Thecc.03G296500 Theobroma cacao HOM05D004439 ORTHO05D005670 2.0e-196 689.1 408 79.9
Potri.003G104700 Populus trichocarpa HOM05D004439 ORTHO05D005670 4.5e-196 688.0 408 79.9
Duzib084G1213 Durio zibethinus HOM05D004439 ORTHO05D005670 5.9e-196 687.6 415 78.3
Nn2g14269 Nelumbo nucifera HOM05D004439 ORTHO05D005670 7.6e-196 687.2 408 79.7
CSS0017274 Camellia sinensis var. sinensis HOM05D004439 ORTHO05D005670 1.3e-195 686.4 408 78.4
CSS0021285 Camellia sinensis var. sinensis HOM05D004439 ORTHO05D005670 1.3e-195 686.4 408 78.4
CiPaw.11G122200 Carya illinoinensis HOM05D004439 ORTHO05D005670 5.0e-195 684.5 408 78.9
vmacro13901 Vaccinium macrocarpon HOM05D004439 ORTHO05D005670 1.1e-194 683.3 408 77.5
COL.COLO4_10686 Corchorus olitorius HOM05D004439 ORTHO05D005670 1.9e-194 682.6 422 77.3
CANSAT21G0267 Cannabis sativa HOM05D004439 ORTHO05D005670 2.5e-194 682.2 408 78.9
Prupe.5G117700 Prunus persica HOM05D004439 ORTHO05D005670 2.5e-194 682.2 410 77.6
Dinv38840 Davidia involucrata HOM05D004439 ORTHO05D005670 5.5e-194 681.0 408 79.4
Ciclev10020115m.g Citrus clementina HOM05D004439 ORTHO05D005670 3.9e-192 674.9 408 77.9
Manes.11G128600 Manihot esculenta HOM05D004439 ORTHO05D005670 6.7e-192 674.1 408 77.7
QL02p030851 Quercus lobata HOM05D004439 ORTHO05D005670 7.4e-191 670.6 406 77.1
Peaxi162Scf00074g01028 Petunia axillaris HOM05D004439 ORTHO05D005670 1.3e-190 669.8 407 76.7
Atru.chr9.2010 Acer truncatum HOM05D004439 ORTHO05D005670 2.2e-190 669.1 408 77.2
MD06G1105400 Malus domestica HOM05D004439 ORTHO05D005670 3.7e-190 668.3 410 76.3
TWI81G0104 Tripterygium wilfordii HOM05D004439 ORTHO05D005670 6.3e-190 667.5 408 76.2
EL10Ac5g12905 Beta vulgaris HOM05D004439 ORTHO05D005670 1.5e-188 662.9 408 76.5
Lj1g0018659 Lotus japonicus HOM05D004439 ORTHO05D005670 4.5e-188 661.4 408 76.7
Sc01g0010250 Simmondsia chinensis HOM05D004439 ORTHO05D005670 1.3e-187 659.8 406 75.4
arahy.Tifrunner.gnm1.ann1.X9M6Z3 Arachis hypogaea HOM05D004439 ORTHO05D005670 2.2e-187 659.1 406 75.4
Eucgr.E00854 Eucalyptus grandis HOM05D004439 ORTHO05D005670 5.0e-187 657.9 409 74.1
arahy.Tifrunner.gnm1.ann1.FA9VAL Arachis hypogaea HOM05D004439 ORTHO05D005670 6.5e-187 657.5 406 75.1
Sopen08g030490 Solanum pennellii HOM05D004439 ORTHO05D005670 6.5e-187 657.5 408 75.0
Solyc08g082200.3 Solanum lycopersicum HOM05D004439 ORTHO05D005670 8.5e-187 657.1 408 75.0
Ca_15083_v3 Cicer arietinum L. HOM05D004439 ORTHO05D005670 1.4e-186 656.4 408 75.0
arahy.Tifrunner.gnm1.ann1.URL0E3 Arachis hypogaea HOM05D004439 ORTHO05D005670 1.9e-186 656.0 406 75.1
Psat5g147560 Pisum sativum HOM05D004439 ORTHO05D005670 1.9e-186 656.0 406 74.4
Cc08_g15970 Coffea canephora HOM05D004439 ORTHO05D005670 1.6e-185 652.9 407 74.2
Glyma.02G286600 Glycine max HOM05D004439 ORTHO05D005670 2.7e-185 652.1 409 75.6
Phvul.009G207100 Phaseolus vulgaris HOM05D004439 ORTHO05D005670 1.0e-184 650.2 408 74.8
VMungo0647G0731 Vigna mungo HOM05D004439 ORTHO05D005670 1.0e-184 650.2 406 75.4
DCAR_006321 Daucus carota HOM05D004439 ORTHO05D005670 5.1e-184 647.9 399 76.9
ATR0320G020 Amborella trichopoda HOM05D004439 ORTHO05D005670 6.7e-184 647.5 409 74.3
RcHm_v2.0_Chr7g0195041 Rosa chinensis HOM05D004439 ORTHO05D005670 8.8e-184 647.1 403 75.7
Nitab4.5_0001231g0030 Nicotiana tabacum HOM05D004439 ORTHO05D005670 1.5e-183 646.4 413 72.6
Lalb_Chr16g0376971 Lupinus albus HOM05D004439 ORTHO05D005670 2.5e-183 645.6 408 74.5
CAN.G532.113 Capsicum annuum HOM05D004439 ORTHO05D005670 3.3e-183 645.2 408 74.3
HanXRQChr05g0138501 Helianthus annuus HOM05D004439 ORTHO05D005670 3.3e-183 645.2 405 74.1
Medtr3g062490 Medicago truncatula HOM05D004439 ORTHO05D005670 4.3e-183 644.8 408 73.8
vmacro05785 Vaccinium macrocarpon HOM05D004439 ORTHO05D005670 8.2e-182 640.6 395 75.4
Sed0005226 Sechium edule HOM05D004439 ORTHO05D005670 1.4e-181 639.8 407 74.7
Ca_15072_v3 Cicer arietinum L. HOM05D004439 ORTHO05D005670 1.8e-181 639.4 434 70.0
HanXRQChr06g0184201 Helianthus annuus HOM05D004439 ORTHO05D005670 2.4e-181 639.0 405 73.8
CsaV3_5G039570 Cucumis sativus L. HOM05D004439 ORTHO05D005670 6.9e-181 637.5 407 73.7
arahy.Tifrunner.gnm1.ann1.B833UN Arachis hypogaea HOM05D004439 ORTHO05D005670 1.2e-180 636.7 421 71.5
FvH4_5g04460 Fragaria vesca HOM05D004439 ORTHO05D005670 3.4e-180 635.2 402 74.4
MSTRG.1809 Avicennia marina HOM05D004439 ORTHO05D005670 7.7e-180 634.0 408 72.5
Rhsim07G0082800 Rhododendron simsii HOM05D004439 ORTHO05D005670 7.7e-180 634.0 400 74.8
Cpa.g.sc79.44 Carica papaya HOM05D004439 ORTHO05D005670 5.5e-178 627.9 378 77.5
FAN13G1146 Fragaria x ananassa HOM05D004439 ORTHO05D005670 5.5e-178 627.9 403 73.9
SalBow1G1193 Salvia bowleyana HOM05D004439 ORTHO05D005670 6.1e-177 624.4 405 71.6
FAN18G4375 Fragaria x ananassa HOM05D004439 ORTHO05D005670 1.8e-176 622.9 423 70.7
FAN04G2433 Fragaria x ananassa HOM05D004439 ORTHO05D005670 6.7e-176 620.9 423 70.4
Hund11394 Selenicereus undatus HOM05D004439 ORTHO05D005670 1.5e-175 619.8 418 70.6
Lsat_1_v5_gn_6_12240 Lactuca sativa HOM05D004439 ORTHO05D005670 1.7e-174 616.3 387 75.5
FAN08G0613 Fragaria x ananassa HOM05D004439 ORTHO05D005670 4.8e-174 614.8 424 70.0
FAN18G2355 Fragaria x ananassa HOM05D004439 ORTHO05D005670 4.8e-174 614.8 424 70.0
Migut.A00663 Erythranthe guttata HOM05D004439 ORTHO05D005670 4.1e-173 611.7 408 71.3
ECA233G4302 Erigeron canadensis HOM05D004439 ORTHO05D005670 3.5e-172 608.6 405 72.8
Lj8C209T4 Lonicera japonica HOM05D004439 ORTHO05D005670 1.5e-170 603.2 343 81.0
unitig_92.g28124 Utricularia gibba HOM05D004439 ORTHO05D005670 5.5e-170 601.3 409 68.9
AUR62010830 Chenopodium quinoa HOM05D004439 ORTHO05D005670 6.1e-169 597.8 403 69.7
PSO384G1647 Papaver somniferum HOM05D004439 ORTHO05D005670 2.3e-168 595.9 409 70.9
AUR62019828 Chenopodium quinoa HOM05D004439 ORTHO05D005670 1.1e-167 593.6 412 69.2
Sabra03G0071700 Salix brachista HOM05D004439 ORTHO05D005670 1.3e-166 590.1 439 68.1
THA.LOC104809335 Tarenaya hassleriana HOM05D004439 ORTHO05D005670 4.8e-166 588.2 423 66.2
Actinidia27332 Actinidia chinensis HOM05D004439 ORTHO05D005670 6.3e-166 587.8 406 70.4
CDE02G4298 Ceratophyllum demersum HOM05D004439 ORTHO05D005670 1.4e-165 586.6 422 65.4
HPP92_001588 Vanilla planifolia HOM05D004439 ORTHO05D005670 2.4e-165 585.9 401 68.1
PSO339G0633 Papaver somniferum HOM05D004439 ORTHO05D005670 9.1e-165 583.9 410 70.2
Sp7g00230 Schrenkiella parvula HOM05D004439 ORTHO05D005670 1.6e-164 583.2 407 67.1
AL7G47340 Arabidopsis lyrata HOM05D004439 ORTHO05D005670 4.5e-164 581.6 407 67.6
Carub.0007s3348 Capsella rubella HOM05D004439 ORTHO05D005670 5.9e-164 581.3 408 65.9
AT5G41880 Arabidopsis thaliana HOM05D004439 ORTHO05D005670 6.5e-163 577.8 407 66.6
CARHR212680 Cardamine hirsuta HOM05D004439 ORTHO05D005670 4.2e-162 575.1 408 66.7
A04p15000 Brassica napus HOM05D004439 ORTHO05D005670 1.2e-161 573.5 408 65.7
Thhalv10027750m.g Eutrema salsugineum HOM05D004439 ORTHO05D005670 1.2e-161 573.5 407 66.6
BcaC02g08908 Brassica carinata HOM05D004439 ORTHO05D005670 2.1e-161 572.8 408 65.4
C04p49290 Brassica napus HOM05D004439 ORTHO05D005670 2.1e-161 572.8 408 65.4
BolC4t26514H Brassica oleracea HOM05D004439 ORTHO05D005670 2.1e-161 572.8 408 65.4
BraA04t17145Z Brassica rapa HOM05D004439 ORTHO05D005670 2.1e-161 572.8 408 65.4
Ah.12g052480 Amaranthus hybridus HOM05D004439 ORTHO05D005670 3.6e-161 572.0 418 67.2
DCAR_029884 Daucus carota HOM05D004439 ORTHO05D005670 1.8e-160 569.7 380 73.7
BcaB02g07872 Brassica carinata HOM05D004439 ORTHO05D005670 5.2e-160 568.2 409 65.5
SGA_v2.0_scaffold305G47954 Striga asiatica HOM05D004439 ORTHO05D005670 8.8e-160 567.4 450 62.7
HPP92_001766 Vanilla planifolia HOM05D004439 ORTHO05D005670 2.0e-159 566.2 412 65.5
C06p20300 Brassica napus HOM05D004439 ORTHO05D005670 4.8e-158 561.6 410 65.1
Lj8A194T41 Lonicera japonica HOM05D004439 ORTHO05D005670 4.1e-157 558.5 320 80.3
Gohir.A12G236000 Gossypium hirsutum HOM05D004439 ORTHO05D005670 2.2e-155 552.7 319 80.3
BcaB06g27677 Brassica carinata HOM05D004439 ORTHO05D005670 8.5e-155 550.8 389 65.8
Nitab4.5_0008661g0010 Nicotiana tabacum HOM05D004439 ORTHO05D005670 1.5e-154 550.1 392 66.8
BcaC08g44563 Brassica carinata HOM05D004439 ORTHO05D005670 2.7e-153 545.8 403 64.3
Mapoly0061s0010 Marchantia polymorpha HOM05D004439 ORTHO05D005670 4.0e-152 542.0 412 62.4
Oeu063530.1 Olea europaea HOM05D004439 ORTHO05D005670 4.0e-152 542.0 346 72.8
A07p20990 Brassica napus HOM05D004439 ORTHO05D005670 5.4e-149 531.6 431 60.3
Pp3c9_1070 Physcomitrium patens HOM05D004439 ORTHO05D005670 1.6e-148 530.0 409 60.6
Rhsim09G0008900 Rhododendron simsii HOM05D004439 ORTHO05D005670 2.7e-148 529.3 421 62.0
Aa31LG9G280 Aethionema arabicum HOM05D004439 ORTHO05D005670 5.6e-146 521.5 362 66.0
AagrBONN_evm.TU.Sc2ySwM_117.2781 Anthoceros agrestis HOM05D004439 ORTHO05D005670 1.5e-143 513.5 417 60.7
ClCG08G001530 Citrullus lanatus HOM05D004439 ORTHO05D005670 6.4e-142 508.1 490 55.9
CBR_g51004 Chara braunii HOM05D004439 ORTHO05D005670 3.5e-140 502.3 416 56.2
CBR_g30932 Chara braunii HOM05D004439 ORTHO05D005670 2.3e-139 499.6 417 57.3
Haze_08623 Corylus avellana HOM05D004439 ORTHO05D005670 3.6e-137 492.3 371 65.5
TPR.G13893 Trifolium pratense HOM05D004439 ORTHO05D005670 3.9e-131 472.2 402 58.5
arahy.Tifrunner.gnm1.ann1.4X43I0 Arachis hypogaea HOM05D004439 ORTHO05D005670 2.0e-127 459.9 299 71.2
BcaNung06856 Brassica carinata HOM05D004439 ORTHO05D005670 4.9e-126 455.3 406 57.4
Glyma.14G028200 Glycine max HOM05D004439 ORTHO05D005670 2.8e-121 439.5 290 73.1
Zm00001eb346380 Zea mays HOM05D004439 ORTHO05D005670 1.5e-119 433.7 289 72.0
SMO361G0316 Selaginella moellendorffii HOM05D004439 ORTHO05D005670 1.7e-118 430.3 343 61.2
SMO361G0219 Selaginella moellendorffii HOM05D004439 ORTHO05D005670 1.4e-117 427.2 342 59.9
arahy.Tifrunner.gnm1.ann1.JNH9P6 Arachis hypogaea HOM05D004439 ORTHO05D005670 2.3e-115 419.9 407 55.3
CSS0041217 Camellia sinensis var. sinensis HOM05D004439 ORTHO05D005670 8.1e-113 411.4 386 57.3
SHI03128 Sapria himalayana HOM05D004439 ORTHO05D005670 3.2e-109 399.4 439 49.4
Cre07.g312350 Chlamydomonas reinhardtii HOM05D004439 ORTHO05D005670 7.3e-106 388.3 362 50.6
MD14G1127500 Malus domestica HOM05D004439 ORTHO05D005670 4.2e-101 372.5 242 72.3
Lj2A169G40 Lonicera japonica HOM05D004439 ORTHO05D005670 2.2e-94 350.1 272 63.2
Cfa025390 Carpinus fangiana HOM05D004439 ORTHO05D005670 6.2e-89 332.0 398 43.2
PRCOL_00003494 Prasinoderma coloniale HOM05D004439 ORTHO05D005670 1.1e-88 331.3 415 43.6
RcHm_v2.0_Chr6g0245381 Rosa chinensis HOM05D004439 ORTHO05D005670 4.8e-81 305.8 163 81.6
RcHm_v2.0_Chr5g0068871 Rosa chinensis HOM05D004439 ORTHO05D005670 1.0e-78 298.1 280 56.1
RcHm_v2.0_Chr6g0245391 Rosa chinensis HOM05D004439 ORTHO05D005670 2.5e-77 293.5 208 70.2
TPR.G191 Trifolium pratense HOM05D004439 ORTHO05D005670 1.5e-63 247.7 175 68.0
SEGI_14966 Sequoiadendron giganteum HOM05D004439 ORTHO05D005670 5.0e-54 216.1 194 54.6
TPR.G9934 Trifolium pratense HOM05D004439 ORTHO05D005670 6.5e-54 215.7 217 55.3
PSO063G0793 Papaver somniferum HOM05D004439 ORTHO05D005670 2.5e-53 213.8 183 57.9
MELO3C027184.2 Cucumis melo HOM05D004439 ORTHO05D005670 1.4e-51 208.0 119 76.5
AL3G52130 Arabidopsis lyrata HOM05D004439 ORTHO05D005670 2.0e-39 167.5 252 42.5
MD14G1127600 Malus domestica HOM05D004439 ORTHO05D005670 4.5e-39 166.4 109 73.4
AL1G55640 Arabidopsis lyrata HOM05D004439 ORTHO05D005670 7.7e-39 165.6 250 42.4
Os05g0358200 Oryza sativa ssp. japonica HOM05D004439 ORTHO05D005670 2.3e-38 164.1 107 70.1
MELO3C031246.2 Cucumis melo HOM05D004439 ORTHO05D005670 4.0e-35 153.3 157 52.2
PGSC0003DMG400012290 Solanum tuberosum HOM05D004439 ORTHO05D005670 3.7e-33 146.7 233 38.2
TPR.G3794 Trifolium pratense HOM05D004439 ORTHO05D005670 1.6e-31 141.4 99 68.7
TPR.G9939 Trifolium pratense HOM05D004439 ORTHO05D005670 3.5e-31 140.2 178 43.8
AL2G23180 Arabidopsis lyrata HOM05D004439 ORTHO05D005670 4.4e-26 123.2 250 36.8
AL1G44430 Arabidopsis lyrata HOM05D004439 ORTHO05D005670 1.9e-21 107.8 85 63.5
Lj2A169G39 Lonicera japonica HOM05D004439 ORTHO05D005670 2.8e-20 104.0 71 66.2
SEGI_35904 Sequoiadendron giganteum HOM05D004439 ORTHO05D000007 2.3e-19 100.9 128 41.4
MD06G1072700 Malus domestica HOM05D004439 ORTHO05D005670 5.8e-18 96.3 57 73.7
TPR.G22107 Trifolium pratense HOM05D004439 ORTHO05D005670 5.4e-16 89.7 70 64.3
Actinidia27323 Actinidia chinensis HOM05D004439 ORTHO05D005670 8.3e-09 65.9 78 47.4
Actinidia27324 Actinidia chinensis HOM05D004439 ORTHO05D005670 8.3e-09 65.9 33 81.8
Actinidia22721 Actinidia chinensis HOM05D004439 ORTHO05D057326 3.2e-08 63.9 66 57.6
Actinidia27321 Actinidia chinensis HOM05D004439 ORTHO05D005670 4.6e-07 60.1 42 64.3


User provided reference genes

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