Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G01145 Aquilegia oxysepala HOM05D006298 ORTHO05D008167 1.2e-138 496.5 249 100.0
TAR623G0635 Trochodendron aralioides HOM05D006298 ORTHO05D008167 2.0e-90 336.3 251 73.3
Cfa017623 Carpinus fangiana HOM05D006298 ORTHO05D008167 5.6e-88 328.2 252 71.8
CiPaw.09G171800 Carya illinoinensis HOM05D006298 ORTHO05D008167 2.8e-87 325.9 251 70.9
QL07p043135 Quercus lobata HOM05D006298 ORTHO05D008167 4.7e-87 325.1 250 68.4
CSS0011355 Camellia sinensis var. sinensis HOM05D006298 ORTHO05D008167 4.0e-86 322.0 252 70.6
CSS0035285 Camellia sinensis var. sinensis HOM05D006298 ORTHO05D008167 2.0e-85 319.7 253 70.8
Haze_20529 Corylus avellana HOM05D006298 ORTHO05D008167 2.0e-85 319.7 272 66.9
Cpa.g.sc102.32 Carica papaya HOM05D006298 ORTHO05D008167 2.2e-84 316.2 251 69.3
COL.COLO4_26951 Corchorus olitorius HOM05D006298 ORTHO05D008167 3.7e-84 315.5 251 66.1
Hma1.2p1_0205F.1_g086920 Hydrangea macrophylla HOM05D006298 ORTHO05D008167 3.7e-84 315.5 250 69.6
Prupe.7G128900 Prunus persica HOM05D006298 ORTHO05D008167 1.1e-83 313.9 252 68.3
Eucgr.K02926 Eucalyptus grandis HOM05D006298 ORTHO05D008167 4.6e-82 308.5 255 64.7
Actinidia08768 Actinidia chinensis HOM05D006298 ORTHO05D008167 7.8e-82 307.8 251 65.7
PSO063G5537 Papaver somniferum HOM05D006298 ORTHO05D008167 1.0e-81 307.4 251 68.1
PSO339G0145 Papaver somniferum HOM05D006298 ORTHO05D008167 1.0e-81 307.4 251 69.3
FvH4_6g16470 Fragaria vesca HOM05D006298 ORTHO05D008167 1.3e-81 307.0 251 68.5
FAN14G4061 Fragaria x ananassa HOM05D006298 ORTHO05D008167 1.3e-81 307.0 251 68.5
Rhsim03G0091000 Rhododendron simsii HOM05D006298 ORTHO05D008167 1.3e-81 307.0 256 67.6
FAN05G1999 Fragaria x ananassa HOM05D006298 ORTHO05D008167 1.7e-81 306.6 252 67.1
FAN05G2800 Fragaria x ananassa HOM05D006298 ORTHO05D008167 1.7e-81 306.6 252 67.1
Oeu053684.1 Olea europaea HOM05D006298 ORTHO05D008167 1.7e-81 306.6 260 65.8
Thecc.05G068100 Theobroma cacao HOM05D006298 ORTHO05D008167 3.9e-81 305.4 250 65.2
Gohir.D01G130400 Gossypium hirsutum HOM05D006298 ORTHO05D008167 5.1e-81 305.1 253 66.8
Gorai.002G161800 Gossypium raimondii HOM05D006298 ORTHO05D008167 5.1e-81 305.1 253 66.8
Ca_11509_v3 Cicer arietinum L. HOM05D006298 ORTHO05D008167 6.6e-81 304.7 228 69.7
FAN02G1782 Fragaria x ananassa HOM05D006298 ORTHO05D008167 1.1e-80 303.9 252 66.7
Potri.016G099300 Populus trichocarpa HOM05D006298 ORTHO05D008167 1.1e-80 303.9 252 67.9
PGR142G1273 Punica granatum HOM05D006298 ORTHO05D008167 1.1e-80 303.9 255 67.8
TPR.G11270 Trifolium pratense HOM05D006298 ORTHO05D008167 1.1e-80 303.9 251 67.3
HPP92_022584 Vanilla planifolia HOM05D006298 ORTHO05D008167 1.1e-80 303.9 251 65.3
FAN09G1272 Fragaria x ananassa HOM05D006298 ORTHO05D008167 1.5e-80 303.5 252 67.1
VMungo0720G2332 Vigna mungo HOM05D006298 ORTHO05D008167 1.5e-80 303.5 251 67.3
Cc06_g04290 Coffea canephora HOM05D006298 ORTHO05D008167 2.5e-80 302.8 220 70.9
Lj4g0025039 Lotus japonicus HOM05D006298 ORTHO05D008167 2.5e-80 302.8 254 66.1
Manes.08G011200 Manihot esculenta HOM05D006298 ORTHO05D008167 2.5e-80 302.8 253 68.8
CsaV3_3G036020 Cucumis sativus L. HOM05D006298 ORTHO05D008167 3.3e-80 302.4 252 67.5
RcHm_v2.0_Chr3g0470361 Rosa chinensis HOM05D006298 ORTHO05D008167 3.3e-80 302.4 251 67.7
GSVIVG01033647001 Vitis vinifera HOM05D006298 ORTHO05D008167 5.6e-80 301.6 251 66.9
Sabra16G0098900 Salix brachista HOM05D006298 ORTHO05D008167 9.5e-80 300.8 252 67.9
Gohir.A01G141763 Gossypium hirsutum HOM05D006298 ORTHO05D008167 3.6e-79 298.9 253 66.0
Lj2A120T46 Lonicera japonica HOM05D006298 ORTHO05D008167 3.6e-79 298.9 252 66.7
Phvul.007G147500 Phaseolus vulgaris HOM05D006298 ORTHO05D008167 4.7e-79 298.5 251 65.3
CDE03G0133 Ceratophyllum demersum HOM05D006298 ORTHO05D008167 8.1e-79 297.7 253 63.6
MD04G1092500 Malus domestica HOM05D006298 ORTHO05D008167 4.0e-78 295.4 253 64.8
ClCG10G020070 Citrullus lanatus HOM05D006298 ORTHO05D008167 5.2e-78 295.0 248 67.3
Actinidia28907 Actinidia chinensis HOM05D006298 ORTHO05D008167 6.8e-78 294.7 293 58.0
Ciclev10012651m.g Citrus clementina HOM05D006298 ORTHO05D008167 6.8e-78 294.7 254 65.7
Sed0010557 Sechium edule HOM05D006298 ORTHO05D008167 3.4e-77 292.4 224 69.2
TWI53G1706 Tripterygium wilfordii HOM05D006298 ORTHO05D008167 5.8e-77 291.6 250 64.4
EL10Ac7g16640 Beta vulgaris HOM05D006298 ORTHO05D008167 9.9e-77 290.8 264 63.3
TWI77G0409 Tripterygium wilfordii HOM05D006298 ORTHO05D008167 1.7e-76 290.0 250 63.2
CDE04G2630 Ceratophyllum demersum HOM05D006298 ORTHO05D008167 2.9e-76 289.3 253 62.5
Psat6g073640 Pisum sativum HOM05D006298 ORTHO05D008167 2.9e-76 289.3 181 76.8
DCAR_017674 Daucus carota HOM05D006298 ORTHO05D008167 3.8e-76 288.9 252 64.3
Sc20g0005540 Simmondsia chinensis HOM05D006298 ORTHO05D008167 4.9e-76 288.5 252 61.5
Duzib106G2039 Durio zibethinus HOM05D006298 ORTHO05D008167 8.4e-76 287.7 249 65.5
THA.LOC104807061 Tarenaya hassleriana HOM05D006298 ORTHO05D008167 1.4e-75 287.0 256 63.3
ATR0219G012 Amborella trichopoda HOM05D006298 ORTHO05D008167 2.4e-75 286.2 257 64.2
AUR62040336 Chenopodium quinoa HOM05D006298 ORTHO05D008167 2.4e-75 286.2 252 62.3
CANSAT80G2892 Cannabis sativa HOM05D006298 ORTHO05D008167 3.2e-75 285.8 227 69.2
SGA_v2.0_scaffold40G15525 Striga asiatica HOM05D006298 ORTHO05D008167 3.2e-75 285.8 255 64.7
Migut.J00651 Erythranthe guttata HOM05D006298 ORTHO05D008167 5.4e-75 285.0 256 64.5
Glyma.10G054900 Glycine max HOM05D006298 ORTHO05D008167 5.4e-75 285.0 252 63.9
arahy.Tifrunner.gnm1.ann1.GSM08A Arachis hypogaea HOM05D006298 ORTHO05D008167 7.1e-75 284.6 250 64.4
arahy.Tifrunner.gnm1.ann1.UZM884 Arachis hypogaea HOM05D006298 ORTHO05D008167 7.1e-75 284.6 250 64.4
PGSC0003DMG400028288 Solanum tuberosum HOM05D006298 ORTHO05D008167 1.6e-74 283.5 252 62.3
Thhalv10017183m.g Eutrema salsugineum HOM05D006298 ORTHO05D008167 2.1e-74 283.1 255 62.4
Aa31LG5G22130 Aethionema arabicum HOM05D006298 ORTHO05D008167 3.5e-74 282.3 251 62.2
Sp4g19190 Schrenkiella parvula HOM05D006298 ORTHO05D008167 6.0e-74 281.6 251 62.5
MBI18_g02636_MAGBIO Magnolia biondii HOM05D006298 ORTHO05D008167 7.8e-74 281.2 290 59.7
Os03g0152600 Oryza sativa ssp. japonica HOM05D006298 ORTHO05D008167 1.3e-73 280.4 252 62.3
Sopen10g033440 Solanum pennellii HOM05D006298 ORTHO05D008167 5.1e-73 278.5 253 60.9
Glyma.13G142000 Glycine max HOM05D006298 ORTHO05D008167 6.6e-73 278.1 252 62.3
Solyc10g083990.2 Solanum lycopersicum HOM05D006298 ORTHO05D008167 1.1e-72 277.3 253 60.5
Atru.BG.206.p Acer truncatum HOM05D006298 ORTHO05D008167 1.5e-72 276.9 160 83.8
Nitab4.5_0000814g0050 Nicotiana tabacum HOM05D006298 ORTHO05D008167 1.5e-72 276.9 251 60.6
Lalb_Chr21g0315031 Lupinus albus HOM05D006298 ORTHO05D008167 2.5e-72 276.2 252 62.7
Nitab4.5_0000063g0130 Nicotiana tabacum HOM05D006298 ORTHO05D008167 2.5e-72 276.2 251 60.2
Lsat_1_v5_gn_1_51681 Lactuca sativa HOM05D006298 ORTHO05D008167 1.2e-71 273.9 249 61.4
Carub.0004s1875 Capsella rubella HOM05D006298 ORTHO05D008167 1.6e-71 273.5 188 72.3
AUR62042070 Chenopodium quinoa HOM05D006298 ORTHO05D008167 2.1e-71 273.1 254 60.2
AUR62044331 Chenopodium quinoa HOM05D006298 ORTHO05D008167 2.1e-71 273.1 254 60.2
THA.LOC104805233 Tarenaya hassleriana HOM05D006298 ORTHO05D008167 4.7e-71 271.9 286 57.3
vmacro07297 Vaccinium macrocarpon HOM05D006298 ORTHO05D008167 6.2e-71 271.6 164 81.7
BraA04t18305Z Brassica rapa HOM05D006298 ORTHO05D008167 2.4e-70 269.6 183 73.2
Peaxi162Scf00311g01110 Petunia axillaris HOM05D006298 ORTHO05D008167 4.0e-70 268.9 248 60.1
BcaC02g07571 Brassica carinata HOM05D006298 ORTHO05D008167 2.0e-69 266.5 183 72.1
BolC4t28046H Brassica oleracea HOM05D006298 ORTHO05D008167 2.0e-69 266.5 183 72.1
BcaB06g28958 Brassica carinata HOM05D006298 ORTHO05D008167 3.4e-69 265.8 251 60.2
A04p28210 Brassica napus HOM05D006298 ORTHO05D008167 1.3e-68 263.8 250 60.8
C04p65570 Brassica napus HOM05D006298 ORTHO05D008167 1.3e-68 263.8 250 60.8
HanXRQChr11g0350481 Helianthus annuus HOM05D006298 ORTHO05D008167 1.3e-68 263.8 251 59.8
Ah.08g211590 Amaranthus hybridus HOM05D006298 ORTHO05D008167 1.9e-64 250.0 255 56.1
AT2G36895 Arabidopsis thaliana HOM05D006298 ORTHO05D008167 1.9e-64 250.0 278 53.6
ECA248G3050 Erigeron canadensis HOM05D006298 ORTHO05D008167 5.6e-64 248.4 172 69.8
Nn6g35281 Nelumbo nucifera HOM05D006298 ORTHO05D008167 7.3e-64 248.1 163 78.5
AL4G33120 Arabidopsis lyrata HOM05D006298 ORTHO05D008167 3.1e-62 242.7 162 74.1
SMO119G0246 Selaginella moellendorffii HOM05D006298 ORTHO05D008167 1.1e-56 224.2 182 61.5
Mapoly0063s0087 Marchantia polymorpha HOM05D006298 ORTHO05D008167 9.6e-56 221.1 195 60.0
Atru.chr8.1795 Acer truncatum HOM05D006298 ORTHO05D008167 2.1e-55 219.9 110 94.5
Duzib093G1320 Durio zibethinus HOM05D006298 ORTHO05D008167 3.7e-55 219.2 251 53.4
Pp3c6_17550 Physcomitrium patens HOM05D006298 ORTHO05D008167 6.2e-55 218.4 182 60.4
AUR62042510 Chenopodium quinoa HOM05D006298 ORTHO05D008167 1.8e-54 216.9 253 53.4
unitig_26.g9235 Utricularia gibba HOM05D006298 ORTHO05D008167 5.5e-51 205.3 129 78.3
Dinv35789 Davidia involucrata HOM05D006298 ORTHO05D008167 7.9e-50 201.4 199 61.3
SEGI_37587 Sequoiadendron giganteum HOM05D006298 ORTHO05D008167 1.8e-49 200.3 131 77.1
Medtr1g063100 Medicago truncatula HOM05D006298 ORTHO05D008167 1.3e-47 194.1 197 58.9
Zm00001eb403160 Zea mays HOM05D006298 ORTHO05D008167 2.4e-46 189.9 150 66.0
BcaC02g07569 Brassica carinata HOM05D006298 ORTHO05D008167 3.9e-41 172.6 135 65.2
CARHR131360 Cardamine hirsuta HOM05D006298 ORTHO05D008167 2.5e-40 169.9 90 86.7
Hma1.2p1_0205F.1_g086930 Hydrangea macrophylla HOM05D006298 ORTHO05D008167 6.1e-34 148.7 160 56.9
AagrBONN_evm.TU.Sc2ySwM_228.4347 Anthoceros agrestis HOM05D006298 ORTHO05D008167 1.2e-29 134.4 109 63.3
CBR_g45378 Chara braunii HOM05D006298 ORTHO05D008167 2.6e-29 133.3 93 66.7
Thhalv10000465m.g Eutrema salsugineum HOM05D006298 ORTHO05D008167 4.2e-27 125.9 114 62.3
Cre11.g469100 Chlamydomonas reinhardtii HOM05D006298 ORTHO05D008167 1.6e-26 124.0 150 45.3
Medtr6g035275 Medicago truncatula HOM05D006298 ORTHO05D008167 1.4e-22 110.9 56 92.9
BcaC04g19302 Brassica carinata HOM05D006298 ORTHO05D008167 1.6e-18 97.4 56 82.1
MD12G1110600 Malus domestica HOM05D006298 ORTHO05D008167 4.7e-18 95.9 49 87.8
BcaB01g03809 Brassica carinata HOM05D006298 ORTHO05D008167 4.8e-15 85.9 86 52.3
BcaC02g07570 Brassica carinata HOM05D006298 ORTHO05D008167 1.9e-11 73.9 38 78.9
Ca_27221_v3 Cicer arietinum L. HOM05D006298 ORTHO05D008167 2.7e-10 70.1 69 49.3
Ca_27663_v3 Cicer arietinum L. HOM05D002033 ORTHO05D002181 1.3e-07 61.2 49 57.1
Prupe.4G234300 Prunus persica HOM05D006298 ORTHO05D007008 3.7e-07 59.7 31 83.9
arahy.Tifrunner.gnm1.ann1.31G0Q2 Arachis hypogaea HOM05D006298 ORTHO05D082484 8.2e-07 58.5 49 59.2


User provided reference genes

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