Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G01139 Aquilegia oxysepala HOM05D007534 ORTHO05D009540 1.4e-148 529.6 270 100.0
Thecc.05G068400 Theobroma cacao HOM05D007534 ORTHO05D009540 6.5e-90 334.7 274 66.8
CANSAT80G0853 Cannabis sativa HOM05D007534 ORTHO05D009540 1.9e-89 333.2 272 66.9
CAN.G900.25 Capsicum annuum HOM05D007534 ORTHO05D009540 4.2e-89 332.0 189 83.6
vmacro08785 Vaccinium macrocarpon HOM05D007534 ORTHO05D009540 1.6e-88 330.1 178 88.8
QL07p043071 Quercus lobata HOM05D007534 ORTHO05D009540 2.1e-88 329.7 223 74.4
Gohir.D01G204300 Gossypium hirsutum HOM05D007534 ORTHO05D009540 3.5e-88 328.9 261 67.4
GSVIVG01033650001 Vitis vinifera HOM05D007534 ORTHO05D009540 3.5e-88 328.9 178 89.3
ClCG04G009370 Citrullus lanatus HOM05D007534 ORTHO05D009540 4.6e-88 328.6 178 87.6
Duzib093G0985 Durio zibethinus HOM05D007534 ORTHO05D009540 1.3e-87 327.0 274 65.7
COL.COLO4_26947 Corchorus olitorius HOM05D007534 ORTHO05D009540 3.9e-87 325.5 229 73.8
Lj2A120T45 Lonicera japonica HOM05D007534 ORTHO05D009540 5.1e-87 325.1 199 81.9
Gorai.002G246500 Gossypium raimondii HOM05D007534 ORTHO05D009540 8.7e-87 324.3 262 67.2
CsaV3_6G039950 Cucumis sativus L. HOM05D007534 ORTHO05D009540 1.1e-86 323.9 178 87.6
Atru.chr8.1788 Acer truncatum HOM05D007534 ORTHO05D009540 1.5e-86 323.6 262 67.6
Eucgr.A01668 Eucalyptus grandis HOM05D007534 ORTHO05D009540 1.5e-86 323.6 279 63.8
TAR369G0058 Trochodendron aralioides HOM05D007534 ORTHO05D009540 1.5e-86 323.6 178 88.2
Cpa.g.sc102.24 Carica papaya HOM05D007534 ORTHO05D009540 3.3e-86 322.4 280 66.1
Solyc09g008270.3 Solanum lycopersicum HOM05D007534 ORTHO05D009540 7.4e-86 321.2 178 86.0
Sopen09g003090 Solanum pennellii HOM05D007534 ORTHO05D009540 7.4e-86 321.2 178 86.0
arahy.Tifrunner.gnm1.ann1.39JB5J Arachis hypogaea HOM05D007534 ORTHO05D009540 9.7e-86 320.9 202 79.7
arahy.Tifrunner.gnm1.ann1.C885SU Arachis hypogaea HOM05D007534 ORTHO05D009540 9.7e-86 320.9 202 79.7
HanXRQChr13g0400981 Helianthus annuus HOM05D007534 ORTHO05D009540 9.7e-86 320.9 250 68.8
MELO3C024472.2 Cucumis melo HOM05D007534 ORTHO05D009540 1.6e-85 320.1 178 86.0
Lalb_Chr06g0171761 Lupinus albus HOM05D007534 ORTHO05D009540 2.2e-85 319.7 179 87.2
SalBow3G3627 Salvia bowleyana HOM05D007534 ORTHO05D009540 2.8e-85 319.3 227 71.8
Migut.J00648 Erythranthe guttata HOM05D007534 ORTHO05D009540 3.7e-85 318.9 237 70.0
Potri.016G098900 Populus trichocarpa HOM05D007534 ORTHO05D009540 3.7e-85 318.9 202 79.7
Sed0017969 Sechium edule HOM05D007534 ORTHO05D009540 3.7e-85 318.9 178 85.4
PGSC0003DMG400003865 Solanum tuberosum HOM05D007534 ORTHO05D009540 3.7e-85 318.9 197 80.2
CiPaw.10G129000 Carya illinoinensis HOM05D007534 ORTHO05D009540 4.8e-85 318.5 178 86.0
Nn2g13809 Nelumbo nucifera HOM05D007534 ORTHO05D009540 6.3e-85 318.2 270 65.2
Gohir.A01G213100 Gossypium hirsutum HOM05D007534 ORTHO05D009540 8.2e-85 317.8 261 66.3
Manes.09G065300 Manihot esculenta HOM05D007534 ORTHO05D009540 1.4e-84 317.0 251 66.1
Prupe.7G128600 Prunus persica HOM05D007534 ORTHO05D009540 1.4e-84 317.0 269 64.3
RcHm_v2.0_Chr3g0470401 Rosa chinensis HOM05D007534 ORTHO05D009540 1.4e-84 317.0 257 69.6
TWI53G0173 Tripterygium wilfordii HOM05D007534 ORTHO05D009540 1.8e-84 316.6 245 69.8
Oeu005026.1 Olea europaea HOM05D007534 ORTHO05D009540 4.1e-84 315.5 195 80.0
Lsat_1_v5_gn_6_24941 Lactuca sativa HOM05D007534 ORTHO05D009540 5.3e-84 315.1 273 62.6
MSTRG.19184 Avicennia marina HOM05D007534 ORTHO05D009540 6.9e-84 314.7 259 64.9
Lj5g0014413 Lotus japonicus HOM05D007534 ORTHO05D009540 9.0e-84 314.3 177 87.0
Sc20g0005570 Simmondsia chinensis HOM05D007534 ORTHO05D009540 1.2e-83 313.9 254 64.6
Ca_28252_v3 Cicer arietinum L. HOM05D007534 ORTHO05D009540 2.0e-83 313.2 177 86.4
Glyma.13G141700 Glycine max HOM05D007534 ORTHO05D009540 2.6e-83 312.8 196 78.6
AUR62042063 Chenopodium quinoa HOM05D007534 ORTHO05D009540 3.4e-83 312.4 279 63.1
Medtr1g063070 Medicago truncatula HOM05D007534 ORTHO05D009540 4.5e-83 312.0 177 85.9
Zm00001eb003080 Zea mays HOM05D007534 ORTHO05D009540 4.5e-83 312.0 202 76.2
BolC4t22757H Brassica oleracea HOM05D007534 ORTHO05D009540 5.9e-83 311.6 178 83.7
AT2G36885 Arabidopsis thaliana HOM05D007534 ORTHO05D009540 7.7e-83 311.2 178 85.4
BraA05t19860Z Brassica rapa HOM05D007534 ORTHO05D009540 1.0e-82 310.8 196 78.1
Sabra16G0099100 Salix brachista HOM05D007534 ORTHO05D009540 1.0e-82 310.8 266 62.4
A05p08980 Brassica napus HOM05D007534 ORTHO05D009540 1.3e-82 310.5 178 83.1
THA.LOC104807064 Tarenaya hassleriana HOM05D007534 ORTHO05D009540 1.7e-82 310.1 205 73.7
BcaC02g11812 Brassica carinata HOM05D007534 ORTHO05D009540 2.2e-82 309.7 200 76.0
Os03g0137600 Oryza sativa ssp. japonica HOM05D007534 ORTHO05D009540 2.2e-82 309.7 183 82.0
SGA_v2.0_scaffold75G24837 Striga asiatica HOM05D007534 ORTHO05D009540 2.2e-82 309.7 215 73.0
AL4G33100 Arabidopsis lyrata HOM05D007534 ORTHO05D009540 2.9e-82 309.3 178 85.4
Rhsim04G0144000 Rhododendron simsii HOM05D007534 ORTHO05D009540 3.8e-82 308.9 208 76.0
Phvul.007G147900 Phaseolus vulgaris HOM05D007534 ORTHO05D009540 5.0e-82 308.5 196 77.6
BcaB02g09324 Brassica carinata HOM05D007534 ORTHO05D009540 6.5e-82 308.1 178 82.6
Carub.0004s1873 Capsella rubella HOM05D007534 ORTHO05D009540 6.5e-82 308.1 189 79.9
ECA233G2496 Erigeron canadensis HOM05D007534 ORTHO05D009540 6.5e-82 308.1 186 79.0
C04p11090 Brassica napus HOM05D007534 ORTHO05D009540 8.5e-82 307.8 178 83.1
Psat6g074600 Pisum sativum HOM05D007534 ORTHO05D009540 1.1e-81 307.4 177 84.7
Dinv37321 Davidia involucrata HOM05D001037 ORTHO05D000888 1.4e-81 307.0 202 76.2
CARHR131340 Cardamine hirsuta HOM05D007534 ORTHO05D009540 1.6e-80 303.5 178 81.5
Haze_20525 Corylus avellana HOM05D007534 ORTHO05D009540 1.6e-80 303.5 281 60.1
Ciclev10012507m.g Citrus clementina HOM05D007534 ORTHO05D009540 4.8e-77 292.0 273 61.5
PSO266G0073 Papaver somniferum HOM05D007534 ORTHO05D009540 6.3e-77 291.6 229 65.9
Nitab4.5_0000578g0110 Nicotiana tabacum HOM05D007534 ORTHO05D009540 1.1e-76 290.8 236 65.3
ATR0723G005 Amborella trichopoda HOM05D007534 ORTHO05D009540 3.4e-75 285.8 195 70.8
Cfa017628 Carpinus fangiana HOM05D007534 ORTHO05D009540 1.0e-74 284.3 273 60.4
Cc06_g04320 Coffea canephora HOM05D007534 ORTHO05D009540 1.0e-74 284.3 256 60.9
MD12G1110000 Malus domestica HOM05D007534 ORTHO05D009540 6.5e-74 281.6 237 65.0
Sp4g19170 Schrenkiella parvula HOM05D007534 ORTHO05D009540 6.5e-74 281.6 176 77.3
Aa31LG5G22110 Aethionema arabicum HOM05D007534 ORTHO05D009540 1.9e-73 280.0 205 69.8
Actinidia32489 Actinidia chinensis HOM05D007534 ORTHO05D009540 3.2e-73 279.3 153 85.0
Thhalv10017130m.g Eutrema salsugineum HOM05D007534 ORTHO05D009540 1.6e-72 276.9 189 74.1
CDE09G0108 Ceratophyllum demersum HOM05D007534 ORTHO05D009540 2.1e-72 276.6 239 61.9
Hma1.2p1_0205F.1_g086900 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 2.0e-70 270.0 147 89.1
Nitab4.5_0008624g0030 Nicotiana tabacum HOM05D007534 ORTHO05D009540 3.1e-68 262.7 237 60.3
Mapoly0049s0045 Marchantia polymorpha HOM05D007534 ORTHO05D009540 1.3e-66 257.3 232 59.1
Ah.15g092560 Amaranthus hybridus HOM05D007534 ORTHO05D009540 1.7e-66 256.9 189 69.3
Peaxi162Scf00847g00032 Petunia axillaris HOM05D007534 ORTHO05D009540 1.1e-65 254.2 247 55.9
EL10Ac7g16645 Beta vulgaris HOM05D007534 ORTHO05D009540 3.2e-65 252.7 245 55.9
AagrBONN_evm.TU.Sc2ySwM_117.1862 Anthoceros agrestis HOM05D007534 ORTHO05D009540 1.5e-62 243.8 205 61.0
Pp3c2_17450 Physcomitrium patens HOM05D007534 ORTHO05D009540 9.7e-62 241.1 248 54.4
TPR.G11259 Trifolium pratense HOM05D007534 ORTHO05D009540 2.4e-60 236.5 123 95.1
CSS0046236 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D009540 3.2e-57 226.1 215 60.0
PGR004G0787 Punica granatum HOM05D007534 ORTHO05D009540 1.6e-56 223.8 194 59.3
Hma1.2p1_0828F.1_g225100 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 1.8e-55 220.3 122 86.9
unitig_22.g5100 Utricularia gibba HOM05D007534 ORTHO05D009540 1.9e-49 200.3 124 75.8
QL03p002371 Quercus lobata HOM05D007534 ORTHO05D009540 1.2e-48 197.6 181 61.9
Cre02.g143450 Chlamydomonas reinhardtii HOM05D007534 ORTHO05D009540 1.4e-44 184.1 181 55.2
FAN15G1333 Fragaria x ananassa HOM05D007534 ORTHO05D009540 2.7e-43 179.9 94 92.6
AUR62026915 Chenopodium quinoa HOM05D007534 ORTHO05D009540 4.2e-41 172.6 150 59.3
MD04G1092000 Malus domestica HOM05D007534 ORTHO05D009540 3.5e-35 152.9 129 65.1
CSS0001990 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D012079 4.4e-30 136.0 75 86.7
ATR0680G419 Amborella trichopoda HOM05D007534 ORTHO05D009540 3.9e-26 122.9 65 86.2
Rhsim04G0142700 Rhododendron simsii HOM05D007534 ORTHO05D009540 1.9e-20 104.0 58 87.9
MD04G1092200 Malus domestica HOM05D007534 ORTHO05D009540 2.7e-11 73.6 93 46.2


User provided reference genes

Program Settings