Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G01090 Aquilegia oxysepala HOM05D006252 ORTHO05D007909 2.1e-98 362.5 195 100.0
Nn6g35212 Nelumbo nucifera HOM05D006252 ORTHO05D007909 8.0e-74 280.8 196 78.1
Ciclev10029219m.g Citrus clementina HOM05D006252 ORTHO05D007909 1.2e-72 276.9 194 72.7
PSO063G5667 Papaver somniferum HOM05D006252 ORTHO05D007909 2.0e-72 276.2 197 75.1
Atru.chr3.3505 Acer truncatum HOM05D006252 ORTHO05D007909 2.6e-72 275.8 190 74.2
QL01p014977 Quercus lobata HOM05D006252 ORTHO05D007909 7.5e-72 274.2 195 74.9
TAR633G0073 Trochodendron aralioides HOM05D006252 ORTHO05D007909 7.5e-72 274.2 196 74.5
CsaV3_1G013140 Cucumis sativus L. HOM05D006252 ORTHO05D007909 9.8e-72 273.9 199 75.4
Migut.D02295 Erythranthe guttata HOM05D006252 ORTHO05D007909 9.8e-72 273.9 197 75.1
PSO339G3106 Papaver somniferum HOM05D006252 ORTHO05D007909 9.8e-72 273.9 197 74.1
Hma1.2p1_0051F.1_g029510 Hydrangea macrophylla HOM05D006252 ORTHO05D007909 1.3e-71 273.5 198 75.3
Cpa.g.sc47.1 Carica papaya HOM05D006252 ORTHO05D007909 2.8e-71 272.3 194 72.7
Manes.11G152500 Manihot esculenta HOM05D006252 ORTHO05D007909 2.8e-71 272.3 194 74.2
Peaxi162Scf00983g00015 Petunia axillaris HOM05D006252 ORTHO05D007909 4.9e-71 271.6 198 74.7
CiPaw.13G122300 Carya illinoinensis HOM05D006252 ORTHO05D007909 6.3e-71 271.2 196 73.5
MELO3C004995.2 Cucumis melo HOM05D006252 ORTHO05D007909 1.1e-70 270.4 199 74.9
Prupe.6G113200 Prunus persica HOM05D006252 ORTHO05D007909 9.2e-70 267.3 196 74.0
CSS0004051 Camellia sinensis var. sinensis HOM05D006252 ORTHO05D007909 1.6e-69 266.5 198 73.2
CSS0044427 Camellia sinensis var. sinensis HOM05D006252 ORTHO05D007909 1.6e-69 266.5 198 73.2
HanXRQChr02g0055341 Helianthus annuus HOM05D006252 ORTHO05D007909 1.6e-69 266.5 199 73.9
Solyc11g066410.2 Solanum lycopersicum HOM05D006252 ORTHO05D007909 1.6e-69 266.5 191 74.9
PGSC0003DMG400000456 Solanum tuberosum HOM05D006252 ORTHO05D007909 2.0e-69 266.2 191 74.9
Actinidia07187 Actinidia chinensis HOM05D006252 ORTHO05D007909 2.7e-69 265.8 194 73.2
Cfa010288 Carpinus fangiana HOM05D006252 ORTHO05D007909 4.5e-69 265.0 196 73.5
ClCG03G002460 Citrullus lanatus HOM05D006252 ORTHO05D007909 4.5e-69 265.0 199 73.4
RcHm_v2.0_Chr5g0056671 Rosa chinensis HOM05D006252 ORTHO05D007909 7.8e-69 264.2 196 72.4
Lj2A1006G34 Lonicera japonica HOM05D006252 ORTHO05D007909 1.0e-68 263.8 200 73.0
MD03G1128600 Malus domestica HOM05D006252 ORTHO05D007909 1.3e-68 263.5 194 72.2
Thhalv10002672m.g Eutrema salsugineum HOM05D006252 ORTHO05D007909 1.7e-68 263.1 198 71.2
AL5G23350 Arabidopsis lyrata HOM05D006252 ORTHO05D007909 2.3e-68 262.7 198 70.2
Sopen11g026160 Solanum pennellii HOM05D006252 ORTHO05D007909 2.3e-68 262.7 191 74.9
Thecc.09G298300 Theobroma cacao HOM05D006252 ORTHO05D007909 2.3e-68 262.7 193 70.5
BcaB05g23061 Brassica carinata HOM05D006252 ORTHO05D007909 2.9e-68 262.3 196 71.4
BcaC09g49661 Brassica carinata HOM05D006252 ORTHO05D007909 2.9e-68 262.3 196 71.4
C01p34110 Brassica napus HOM05D006252 ORTHO05D007909 2.9e-68 262.3 196 71.4
BolC1t03381H Brassica oleracea HOM05D006252 ORTHO05D007909 2.9e-68 262.3 196 71.4
Nitab4.5_0005665g0020 Nicotiana tabacum HOM05D006252 ORTHO05D007909 2.9e-68 262.3 196 74.5
ATR0043G002 Amborella trichopoda HOM05D006252 ORTHO05D007909 3.8e-68 261.9 161 83.2
MD11G1148800 Malus domestica HOM05D006252 ORTHO05D007909 3.8e-68 261.9 194 72.2
Sabra09G0002100 Salix brachista HOM05D006252 ORTHO05D007909 6.6e-68 261.2 198 71.7
Sp5g16320 Schrenkiella parvula HOM05D006252 ORTHO05D007909 6.6e-68 261.2 198 71.7
PGR102G1698 Punica granatum HOM05D006252 ORTHO05D007909 8.6e-68 260.8 191 72.8
Cc08_g04460 Coffea canephora HOM05D006252 ORTHO05D007909 1.1e-67 260.4 200 71.5
Potri.004G217000 Populus trichocarpa HOM05D006252 ORTHO05D007909 1.1e-67 260.4 193 72.0
MSTRG.18705 Avicennia marina HOM05D006252 ORTHO05D007909 1.5e-67 260.0 196 71.4
A01p26720 Brassica napus HOM05D006252 ORTHO05D007909 1.5e-67 260.0 196 70.9
BraA01t02602Z Brassica rapa HOM05D006252 ORTHO05D007909 1.5e-67 260.0 196 70.9
Sabra04G0147700 Salix brachista HOM05D006252 ORTHO05D007909 1.5e-67 260.0 190 73.2
COL.COLO4_19198 Corchorus olitorius HOM05D006252 ORTHO05D007909 2.5e-67 259.2 193 70.5
Gorai.009G090100 Gossypium raimondii HOM05D006252 ORTHO05D007909 2.5e-67 259.2 195 70.3
GSVIVG01031460001 Vitis vinifera HOM05D006252 ORTHO05D007909 2.5e-67 259.2 160 81.9
Cc01_g10250 Coffea canephora HOM05D006252 ORTHO05D007909 3.3e-67 258.8 200 71.5
Sed0008981 Sechium edule HOM05D006252 ORTHO05D007909 3.3e-67 258.8 199 71.4
SalBow6G6884 Salvia bowleyana HOM05D006252 ORTHO05D007909 4.3e-67 258.5 212 68.4
ECA233G2302 Erigeron canadensis HOM05D006252 ORTHO05D007909 5.6e-67 258.1 196 72.4
Gohir.D05G088000 Gossypium hirsutum HOM05D006252 ORTHO05D007909 7.3e-67 257.7 195 69.7
Ca_19323_v3 Cicer arietinum L. HOM05D006252 ORTHO05D007909 1.2e-66 256.9 200 70.0
FAN16G0084 Fragaria x ananassa HOM05D006252 ORTHO05D007909 1.2e-66 256.9 196 69.9
FAN21G1285 Fragaria x ananassa HOM05D006252 ORTHO05D007909 1.2e-66 256.9 196 69.9
Aa31LG4G14200 Aethionema arabicum HOM05D006252 ORTHO05D007909 1.6e-66 256.5 198 67.7
THA.LOC104810882 Tarenaya hassleriana HOM05D006252 ORTHO05D007909 1.6e-66 256.5 194 68.0
CARHR151120 Cardamine hirsuta HOM05D006252 ORTHO05D007909 2.1e-66 256.1 198 69.2
AT3G44890 Arabidopsis thaliana HOM05D006252 ORTHO05D007909 2.8e-66 255.8 198 67.7
Gohir.A05G086700 Gossypium hirsutum HOM05D006252 ORTHO05D007909 2.8e-66 255.8 195 68.7
Nitab4.5_0000173g0140 Nicotiana tabacum HOM05D006252 ORTHO05D007909 2.8e-66 255.8 190 74.7
FvH4_3g30600 Fragaria vesca HOM05D006252 ORTHO05D007909 3.6e-66 255.4 196 69.9
FAN11G0619 Fragaria x ananassa HOM05D006252 ORTHO05D007909 3.6e-66 255.4 196 69.9
AUR62014977 Chenopodium quinoa HOM05D006252 ORTHO05D007909 4.7e-66 255.0 199 71.9
TWI79G1340 Tripterygium wilfordii HOM05D006252 ORTHO05D007909 4.7e-66 255.0 194 68.0
FAN25G2218 Fragaria x ananassa HOM05D006252 ORTHO05D007909 6.1e-66 254.6 196 69.4
Lsat_1_v5_gn_6_43381 Lactuca sativa HOM05D006252 ORTHO05D007909 6.1e-66 254.6 192 72.4
Glyma.11G192500 Glycine max HOM05D006252 ORTHO05D007909 1.0e-65 253.8 197 70.6
CDE08G0788 Ceratophyllum demersum HOM05D006252 ORTHO05D007909 1.4e-65 253.4 191 68.6
Carub.0005s1063 Capsella rubella HOM05D006252 ORTHO05D007909 1.8e-65 253.1 198 66.7
CDE02G0854 Ceratophyllum demersum HOM05D006252 ORTHO05D007909 2.3e-65 252.7 191 68.6
AUR62029150 Chenopodium quinoa HOM05D006252 ORTHO05D007909 3.0e-65 252.3 199 70.9
SGA_v2.0_scaffold277G46698 Striga asiatica HOM05D006252 ORTHO05D007909 5.2e-65 251.5 199 69.3
arahy.Tifrunner.gnm1.ann1.Q498P0 Arachis hypogaea HOM05D006252 ORTHO05D007909 8.9e-65 250.8 196 70.9
unitig_746.g26615 Utricularia gibba HOM05D006252 ORTHO05D007909 1.5e-64 250.0 195 70.3
Lalb_Chr03g0027721 Lupinus albus HOM05D006252 ORTHO05D007909 2.0e-64 249.6 190 68.9
TWI75G0936 Tripterygium wilfordii HOM05D006252 ORTHO05D007909 2.0e-64 249.6 172 73.8
arahy.Tifrunner.gnm1.ann1.4A8W5C Arachis hypogaea HOM05D006252 ORTHO05D007909 2.6e-64 249.2 196 70.9
EL10Ac9g22626 Beta vulgaris HOM05D006252 ORTHO05D007909 5.7e-64 248.1 194 70.6
Glyma.12G081500 Glycine max HOM05D006252 ORTHO05D007909 5.7e-64 248.1 196 69.4
Psat7g223760 Pisum sativum HOM05D006252 ORTHO05D007909 7.5e-64 247.7 195 68.2
VMungo1127G0830 Vigna mungo HOM05D006252 ORTHO05D007909 9.8e-64 247.3 192 70.8
Medtr4g057210 Medicago truncatula HOM05D006252 ORTHO05D007909 1.3e-63 246.9 195 69.7
HPP92_003365 Vanilla planifolia HOM05D006252 ORTHO05D007909 1.3e-63 246.9 197 67.0
Rhsim01G0210400 Rhododendron simsii HOM05D006252 ORTHO05D007909 1.7e-63 246.5 196 66.3
vmacro14388 Vaccinium macrocarpon HOM05D006252 ORTHO05D007909 6.4e-63 244.6 196 66.3
Lalb_Chr19g0136901 Lupinus albus HOM05D006252 ORTHO05D007909 1.1e-62 243.8 191 67.0
TPR.G36832 Trifolium pratense HOM05D006252 ORTHO05D007909 3.2e-62 242.3 195 67.2
Phvul.011G086500 Phaseolus vulgaris HOM05D006252 ORTHO05D007909 5.4e-62 241.5 192 69.3
MBI02_g05768_MAGBIO Magnolia biondii HOM05D006252 ORTHO05D007909 1.6e-61 240.0 152 81.6
Lj3g0021853 Lotus japonicus HOM05D006252 ORTHO05D007909 1.1e-59 233.8 188 67.0
Hund01525 Selenicereus undatus HOM05D006252 ORTHO05D007909 1.5e-59 233.4 191 66.0
Dinv16227 Davidia involucrata HOM05D006252 ORTHO05D007909 5.2e-57 224.9 149 76.5
Zm00001eb258190 Zea mays HOM05D006252 ORTHO05D007909 4.4e-56 221.9 195 59.0
Mapoly0005s0034 Marchantia polymorpha HOM05D006252 ORTHO05D007909 6.4e-47 191.4 166 56.6
AagrBONN_evm.TU.Sc2ySwM_362.2261 Anthoceros agrestis HOM05D006252 ORTHO05D007909 4.1e-46 188.7 193 49.2
Haze_24363 Corylus avellana HOM05D006252 ORTHO05D007909 1.5e-40 170.2 105 83.8
CBR_g36656 Chara braunii HOM05D006252 ORTHO05D007909 4.4e-40 168.7 157 52.2
arahy.Tifrunner.gnm1.ann1.151HRH Arachis hypogaea HOM05D006252 ORTHO05D007909 2.4e-38 162.9 103 82.5
Sc21g0000330 Simmondsia chinensis HOM05D006252 ORTHO05D007909 7.1e-38 161.4 141 65.2
Pp3c1_5300 Physcomitrium patens HOM05D006252 ORTHO05D007909 2.7e-37 159.5 158 48.1
Pp3c1_5320 Physcomitrium patens HOM05D006252 ORTHO05D007909 2.7e-37 159.5 158 48.1
Pp3c2_34110 Physcomitrium patens HOM05D006252 ORTHO05D007909 2.7e-37 159.5 168 45.8
Pp3c2_34120 Physcomitrium patens HOM05D006252 ORTHO05D007909 2.7e-37 159.5 168 45.8
Oeu007732.1 Olea europaea HOM05D006252 ORTHO05D007909 4.6e-37 158.7 94 88.3
SMO118G0111 Selaginella moellendorffii HOM05D006252 ORTHO05D007909 4.6e-37 158.7 186 45.2
arahy.Tifrunner.gnm1.ann1.RBN82M Arachis hypogaea HOM05D006252 ORTHO05D007909 1.9e-35 153.3 103 78.6
Thhalv10023194m.g Eutrema salsugineum HOM05D006252 ORTHO05D007909 7.6e-32 141.4 102 73.5
Actinidia24149 Actinidia chinensis HOM05D006252 ORTHO05D007909 1.4e-30 137.1 113 68.1
arahy.Tifrunner.gnm1.ann1.EI3IVH Arachis hypogaea HOM05D006252 ORTHO05D007909 2.1e-29 133.3 90 77.8
SEGI_37172 Sequoiadendron giganteum HOM05D006252 ORTHO05D007909 9.6e-27 124.4 88 67.0
arahy.Tifrunner.gnm1.ann1.8D185T Arachis hypogaea HOM05D006252 ORTHO05D005826 2.2e-23 113.2 71 80.3
Cre12.g556050 Chlamydomonas reinhardtii HOM05D006252 ORTHO05D007909 2.2e-23 113.2 163 37.4
Haze_24362 Corylus avellana HOM05D006252 ORTHO05D007909 3.0e-20 102.8 92 62.0
MCO03G269 Micromonas commoda HOM05D006252 ORTHO05D007909 1.9e-19 100.1 157 33.1
arahy.Tifrunner.gnm1.ann1.KIT0HG Arachis hypogaea HOM05D006252 ORTHO05D007909 7.4e-19 98.2 88 62.5
Oeu007731.1 Olea europaea HOM05D006252 ORTHO05D007909 6.9e-17 91.7 92 55.4
PRCOL_00001763 Prasinoderma coloniale HOM05D006252 ORTHO05D007909 2.9e-15 86.3 162 29.0
SEGI_26717 Sequoiadendron giganteum HOM05D006252 ORTHO05D007909 1.6e-13 80.5 105 42.9
Ca_29226_v3 Cicer arietinum L. HOM05D006252 ORTHO05D008725 9.6e-11 71.2 156 31.4
arahy.Tifrunner.gnm1.ann1.TR51Z4 Arachis hypogaea HOM05D006252 ORTHO05D007909 4.8e-10 68.9 44 70.5
MELO3C029084.2 Cucumis melo HOM05D006252 ORTHO05D007909 2.0e-08 63.5 43 67.4
Zm00001eb258210 Zea mays HOM05D000274 ORTHO05D006772 2.9e-07 59.7 94 41.5
arahy.Tifrunner.gnm1.ann1.LGS4T1 Arachis hypogaea HOM05D006252 ORTHO05D007909 3.8e-07 59.3 48 66.7


User provided reference genes

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