Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G01014 Aquilegia oxysepala HOM05D007233 ORTHO05D009043 4.7e-73 277.7 135 100.0
ATR0665G357 Amborella trichopoda HOM05D007233 ORTHO05D009043 1.2e-47 193.4 134 72.4
TAR369G0714 Trochodendron aralioides HOM05D007233 ORTHO05D009043 2.0e-47 192.6 133 69.2
GSVIVG01031420001 Vitis vinifera HOM05D007233 ORTHO05D009043 2.2e-46 189.1 133 63.9
Thecc.09G294400 Theobroma cacao HOM05D007233 ORTHO05D009043 1.9e-45 186.0 133 65.4
Gohir.D13G228300 Gossypium hirsutum HOM05D007233 ORTHO05D009043 3.2e-45 185.3 133 65.4
CSS0019792 Camellia sinensis var. sinensis HOM05D007233 ORTHO05D009043 4.1e-45 184.9 133 66.2
SalBow3G1176 Salvia bowleyana HOM05D007233 ORTHO05D009043 4.1e-45 184.9 133 63.9
ClCG01G013980 Citrullus lanatus HOM05D007233 ORTHO05D009043 9.2e-45 183.7 133 66.9
COL.COLO4_31139 Corchorus olitorius HOM05D007233 ORTHO05D009043 9.2e-45 183.7 133 65.4
Manes.04G010800 Manihot esculenta HOM05D007233 ORTHO05D009043 2.7e-44 182.2 133 65.4
Rhsim13G0103700 Rhododendron simsii HOM05D007233 ORTHO05D009043 1.0e-43 180.3 133 66.2
vmacro03232 Vaccinium macrocarpon HOM05D007233 ORTHO05D009043 1.0e-43 180.3 133 66.2
Phvul.011G088600 Phaseolus vulgaris HOM05D007233 ORTHO05D009043 1.3e-43 179.9 133 64.7
VMungo1127G1048 Vigna mungo HOM05D007233 ORTHO05D009043 1.7e-43 179.5 133 64.7
Lalb_Chr03g0027851 Lupinus albus HOM05D007233 ORTHO05D009043 2.3e-43 179.1 133 63.9
Sabra04G0127900 Salix brachista HOM05D007233 ORTHO05D009043 2.3e-43 179.1 133 63.9
Potri.004G190200 Populus trichocarpa HOM05D007233 ORTHO05D009043 3.0e-43 178.7 133 65.4
Hund07722 Selenicereus undatus HOM05D007233 ORTHO05D009043 3.0e-43 178.7 134 67.2
Lj3g0012043 Lotus japonicus HOM05D007233 ORTHO05D009043 5.1e-43 177.9 133 63.9
QL01p014111 Quercus lobata HOM05D007233 ORTHO05D009043 6.6e-43 177.6 132 64.4
EL10Ac9g21047 Beta vulgaris HOM05D007233 ORTHO05D009043 8.6e-43 177.2 134 63.4
Ca_10766_v3 Cicer arietinum L. HOM05D007233 ORTHO05D009043 8.6e-43 177.2 133 64.7
Sed0016181 Sechium edule HOM05D007233 ORTHO05D009043 1.9e-42 176.0 133 63.9
MELO3C004843.2 Cucumis melo HOM05D007233 ORTHO05D009043 7.3e-42 174.1 133 65.4
PGR119G2223 Punica granatum HOM05D007233 ORTHO05D009043 1.2e-41 173.3 132 65.2
Prupe.6G116400 Prunus persica HOM05D007233 ORTHO05D009043 1.6e-41 172.9 133 63.9
MSTRG.17742 Avicennia marina HOM05D007233 ORTHO05D009043 2.1e-41 172.6 133 59.4
Medtr4g056300 Medicago truncatula HOM05D007233 ORTHO05D009043 2.8e-41 172.2 134 64.9
CiPaw.14G104900 Carya illinoinensis HOM05D007233 ORTHO05D009043 4.7e-41 171.4 134 63.4
Gohir.A13G223500 Gossypium hirsutum HOM05D007233 ORTHO05D009043 4.7e-41 171.4 133 63.2
Haze_23494 Corylus avellana HOM05D007233 ORTHO05D009043 6.2e-41 171.0 133 60.9
Cc01_g10010 Coffea canephora HOM05D007233 ORTHO05D009043 8.1e-41 170.6 139 60.4
FvH4_3g30010 Fragaria vesca HOM05D007233 ORTHO05D009043 1.8e-40 169.5 133 60.9
Carub.0001s0774 Capsella rubella HOM05D007233 ORTHO05D009043 2.3e-40 169.1 133 62.4
THA.LOC104826400 Tarenaya hassleriana HOM05D007233 ORTHO05D009043 3.1e-40 168.7 133 60.2
TPR.G32017 Trifolium pratense HOM05D007233 ORTHO05D009043 3.1e-40 168.7 134 62.7
AT1G08390 Arabidopsis thaliana HOM05D007233 ORTHO05D009043 4.0e-40 168.3 133 58.6
FAN25G1956 Fragaria x ananassa HOM05D007233 ORTHO05D009043 6.8e-40 167.5 133 60.2
Lsat_1_v5_gn_1_61521 Lactuca sativa HOM05D007233 ORTHO05D009043 6.8e-40 167.5 134 60.4
Aa31LG1G6480 Aethionema arabicum HOM05D007233 ORTHO05D009043 1.5e-39 166.4 133 60.2
Glyma.11G190700 Glycine max HOM05D007233 ORTHO05D009043 1.5e-39 166.4 141 58.2
AL1G18800 Arabidopsis lyrata HOM05D007233 ORTHO05D009043 2.6e-39 165.6 133 60.2
BcaB07g34087 Brassica carinata HOM05D007233 ORTHO05D009043 2.6e-39 165.6 133 59.4
A06p05410 Brassica napus HOM05D007233 ORTHO05D009043 2.6e-39 165.6 133 60.2
C05p06530 Brassica napus HOM05D007233 ORTHO05D009043 2.6e-39 165.6 133 59.4
BolC5t29413H Brassica oleracea HOM05D007233 ORTHO05D009043 2.6e-39 165.6 133 59.4
BraA06t23750Z Brassica rapa HOM05D007233 ORTHO05D009043 2.6e-39 165.6 133 60.2
FAN21G0394 Fragaria x ananassa HOM05D007233 ORTHO05D009043 5.8e-39 164.5 133 59.4
Sp1g07040 Schrenkiella parvula HOM05D007233 ORTHO05D009043 5.8e-39 164.5 133 58.6
CsaV3_1G014310 Cucumis sativus L. HOM05D007233 ORTHO05D009043 7.6e-39 164.1 133 61.7
Migut.N02527 Erythranthe guttata HOM05D007233 ORTHO05D009043 7.6e-39 164.1 133 57.1
SHI05395 Sapria himalayana HOM05D007233 ORTHO05D009043 7.6e-39 164.1 133 59.4
RcHm_v2.0_Chr5g0055931 Rosa chinensis HOM05D007233 ORTHO05D009043 1.3e-38 163.3 133 60.2
SGA_v2.0_scaffold93G28323 Striga asiatica HOM05D007233 ORTHO05D009043 1.7e-38 162.9 137 56.2
unitig_699.g19183 Utricularia gibba HOM05D007233 ORTHO05D009043 2.2e-38 162.5 134 58.2
CARHR008260 Cardamine hirsuta HOM05D007233 ORTHO05D009043 3.8e-38 161.8 133 57.1
Ah.01g016160 Amaranthus hybridus HOM05D007233 ORTHO05D009043 4.9e-38 161.4 140 59.3
Solyc11g066690.2 Solanum lycopersicum HOM05D007233 ORTHO05D009043 4.9e-38 161.4 136 58.1
Sopen11g026420 Solanum pennellii HOM05D007233 ORTHO05D009043 4.9e-38 161.4 136 58.1
Duzib170G0414 Durio zibethinus HOM05D007233 ORTHO05D009043 6.4e-38 161.0 133 59.4
HanXRQChr11g0345871 Helianthus annuus HOM05D007233 ORTHO05D009043 6.4e-38 161.0 135 57.8
Thhalv10009077m.g Eutrema salsugineum HOM05D007233 ORTHO05D009043 8.4e-38 160.6 133 57.1
Eucgr.F03331 Eucalyptus grandis HOM05D007233 ORTHO05D009043 1.4e-37 159.8 143 57.3
Ciclev10030019m.g Citrus clementina HOM05D007233 ORTHO05D009043 3.2e-37 158.7 134 56.7
ECA248G0451 Erigeron canadensis HOM05D007233 ORTHO05D009043 3.2e-37 158.7 135 57.0
PSO063G0378 Papaver somniferum HOM05D007233 ORTHO05D009043 4.1e-37 158.3 133 60.9
PGSC0003DMG400000464 Solanum tuberosum HOM05D007233 ORTHO05D009043 4.1e-37 158.3 136 55.9
Nitab4.5_0000442g0180 Nicotiana tabacum HOM05D007233 ORTHO05D009043 5.4e-37 157.9 136 57.4
Dinv29405 Davidia involucrata HOM05D007233 ORTHO05D009043 7.1e-37 157.5 167 49.7
AUR62031769 Chenopodium quinoa HOM05D007233 ORTHO05D009043 2.1e-36 156.0 137 56.9
PSO339G4613 Papaver somniferum HOM05D007233 ORTHO05D009043 2.1e-36 156.0 133 60.2
Peaxi162Scf00150g00710 Petunia axillaris HOM05D007233 ORTHO05D009043 2.1e-36 156.0 135 57.0
DCAR_015489 Daucus carota HOM05D007233 ORTHO05D009043 2.7e-36 155.6 135 57.0
MD11G1153700 Malus domestica HOM05D007233 ORTHO05D009043 3.5e-36 155.2 132 59.8
MBI04_g22192_MAGBIO Magnolia biondii HOM05D007233 ORTHO05D009043 4.6e-36 154.8 107 69.2
CANSAT78G0435 Cannabis sativa HOM05D007233 ORTHO05D009043 1.0e-35 153.7 135 56.3
CAN.G644.46 Capsicum annuum HOM05D007233 ORTHO05D009043 1.5e-34 149.8 136 55.9
arahy.Tifrunner.gnm1.ann1.5NF9YD Arachis hypogaea HOM05D007233 ORTHO05D009043 8.1e-33 144.1 155 48.4
Nn6g35132 Nelumbo nucifera HOM05D007233 ORTHO05D009043 1.9e-29 132.9 80 72.5
ClCG08G000500 Citrullus lanatus HOM05D007233 ORTHO05D009043 3.2e-29 132.1 104 63.5
Gorai.013G259000 Gossypium raimondii HOM05D007233 ORTHO05D009043 2.7e-28 129.0 103 61.2
Atru.chr3.3421 Acer truncatum HOM05D007233 ORTHO05D009043 1.1e-26 123.6 95 60.0
Cpa.g.sc47.40 Carica papaya HOM05D007233 ORTHO05D009043 6.2e-25 117.9 104 57.7
Psat0s3169g0040 Pisum sativum HOM05D007233 ORTHO05D009043 4.0e-24 115.2 107 59.8
Os03g0684300 Oryza sativa ssp. japonica HOM05D007233 ORTHO05D009043 9.0e-24 114.0 144 45.1
Cfa020420 Carpinus fangiana HOM05D007233 ORTHO05D009043 4.5e-23 111.7 95 54.7
Cfa010203 Carpinus fangiana HOM05D007233 ORTHO05D009043 9.9e-23 110.5 93 57.0
TWI31G0123 Tripterygium wilfordii HOM05D007233 ORTHO05D009043 1.3e-22 110.2 124 49.2
Zm00001eb053200 Zea mays HOM05D007233 ORTHO05D009043 2.2e-22 109.4 141 46.1
Pp3c26_4940 Physcomitrium patens HOM05D007233 ORTHO05D009043 4.9e-22 108.2 139 41.7
Pp3c26_4950 Physcomitrium patens HOM05D007233 ORTHO05D009043 4.9e-22 108.2 139 41.7
Haze_23472 Corylus avellana HOM05D007233 ORTHO05D009043 1.4e-21 106.7 133 45.9
Mapoly0016s0182 Marchantia polymorpha HOM05D007233 ORTHO05D009043 9.3e-21 104.0 134 41.8
Haze_23491 Corylus avellana HOM05D007233 ORTHO05D009043 2.7e-20 102.4 144 43.8
Haze_23479 Corylus avellana HOM05D007233 ORTHO05D009043 1.0e-19 100.5 106 48.1
arahy.Tifrunner.gnm1.ann1.9UEW9D Arachis hypogaea HOM05D007233 ORTHO05D009043 1.1e-18 97.1 127 41.7
CDE02G1642 Ceratophyllum demersum HOM05D007233 ORTHO05D009043 2.1e-17 92.8 86 53.5
AagrBONN_evm.TU.Sc2ySwM_344.3909 Anthoceros agrestis HOM05D007233 ORTHO05D009043 1.8e-16 89.7 110 42.7
Oeu035529.3 Olea europaea HOM05D007233 ORTHO05D009043 3.1e-16 89.0 84 53.6
Sc12g0003860 Simmondsia chinensis HOM05D007233 ORTHO05D009043 5.8e-15 84.7 84 53.6
Duzib168G0428 Durio zibethinus HOM05D007233 ORTHO05D009043 3.0e-11 72.4 107 39.3
Haze_23488 Corylus avellana HOM05D007233 ORTHO05D009043 1.9e-10 69.7 78 44.9
Oeu000616.2 Olea europaea HOM05D007233 ORTHO05D009043 6.2e-09 64.7 73 47.9
arahy.Tifrunner.gnm1.ann1.3ZRX2Z Arachis hypogaea HOM05D007233 ORTHO05D009043 8.4e-06 54.3 71 40.8


User provided reference genes

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