Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G01013 Aquilegia oxysepala HOM05D006347 ORTHO05D007835 2.6e-300 1034.6 545 100.0
Dinv29404 Davidia involucrata HOM05D006347 ORTHO05D007835 2.6e-154 549.7 512 58.2
GSVIVG01031423001 Vitis vinifera HOM05D006347 ORTHO05D007835 3.6e-148 529.3 510 57.3
Nn2g13927 Nelumbo nucifera HOM05D006347 ORTHO05D007835 3.3e-141 506.1 458 58.3
QL01p014117 Quercus lobata HOM05D006347 ORTHO05D007835 8.9e-139 498.0 522 51.3
Thecc.09G294500 Theobroma cacao HOM05D006347 ORTHO05D007835 2.4e-136 490.0 509 54.0
Hma1.2p1_0884F.1_g232450 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 6.0e-135 485.3 501 53.9
Prupe.6G116300 Prunus persica HOM05D006347 ORTHO05D007835 5.1e-134 482.3 533 51.4
Gorai.001G118600 Gossypium raimondii HOM05D006347 ORTHO05D007835 9.5e-133 478.0 542 50.6
Gohir.A07G106500 Gossypium hirsutum HOM05D006347 ORTHO05D007835 8.1e-132 474.9 542 50.2
Gohir.D07G110400 Gossypium hirsutum HOM05D006347 ORTHO05D007835 1.1e-131 474.6 543 50.5
Ciclev10028160m.g Citrus clementina HOM05D006347 ORTHO05D007835 3.1e-131 473.0 509 51.7
Manes.04G010900 Manihot esculenta HOM05D006347 ORTHO05D007835 2.0e-130 470.3 505 52.9
CiPaw.14G105000 Carya illinoinensis HOM05D006347 ORTHO05D007835 2.6e-130 469.9 525 49.9
PSO063G2566 Papaver somniferum HOM05D006347 ORTHO05D007835 8.4e-129 464.9 517 51.3
Sabra09G0119700 Salix brachista HOM05D006347 ORTHO05D007835 8.4e-129 464.9 538 50.4
CsaV3_6G014560 Cucumis sativus L. HOM05D006347 ORTHO05D007835 4.6e-127 459.1 524 49.6
Glyma.13G320700 Glycine max HOM05D006347 ORTHO05D007835 4.6e-127 459.1 518 49.6
Potri.009G151100 Populus trichocarpa HOM05D006347 ORTHO05D007835 4.6e-127 459.1 540 50.4
Duzib168G1158 Durio zibethinus HOM05D006347 ORTHO05D007835 1.7e-126 457.2 509 50.3
TWI31G1233 Tripterygium wilfordii HOM05D006347 ORTHO05D007835 1.7e-126 457.2 507 50.1
MD11G1153600 Malus domestica HOM05D006347 ORTHO05D007835 3.9e-126 456.1 522 49.6
ECA238G1908 Erigeron canadensis HOM05D006347 ORTHO05D007835 8.1e-124 448.4 518 47.7
RcHm_v2.0_Chr5g0055941 Rosa chinensis HOM05D006347 ORTHO05D007835 8.1e-124 448.4 539 48.2
VMungo1080G1358 Vigna mungo HOM05D006347 ORTHO05D007835 8.1e-124 448.4 534 48.5
Eucgr.J00411 Eucalyptus grandis HOM05D006347 ORTHO05D007835 1.1e-123 448.0 521 49.7
Lsat_1_v5_gn_2_96801 Lactuca sativa HOM05D006347 ORTHO05D007835 3.1e-123 446.4 525 46.5
Lj3g0008152 Lotus japonicus HOM05D006347 ORTHO05D007835 5.3e-123 445.7 519 48.7
Sc12g0003850 Simmondsia chinensis HOM05D006347 ORTHO05D007835 1.5e-122 444.1 516 48.1
Actinidia24168 Actinidia chinensis HOM05D006347 ORTHO05D007835 5.8e-122 442.2 481 51.1
Sed0011208 Sechium edule HOM05D006347 ORTHO05D007835 9.9e-122 441.4 528 49.1
Lalb_Chr22g0350521 Lupinus albus HOM05D006347 ORTHO05D007835 1.7e-121 440.7 509 47.7
Atru.chr3.3422 Acer truncatum HOM05D006347 ORTHO05D007835 4.9e-121 439.1 466 53.0
DCAR_015490 Daucus carota HOM05D006347 ORTHO05D007835 1.4e-120 437.6 514 48.6
AUR62031770 Chenopodium quinoa HOM05D006347 ORTHO05D007835 4.2e-120 436.0 512 47.7
Sopen06g031100 Solanum pennellii HOM05D006347 ORTHO05D007835 9.3e-120 434.9 517 50.1
PGSC0003DMG400007153 Solanum tuberosum HOM05D006347 ORTHO05D007835 2.7e-119 433.3 513 50.1
MELO3C021469.2 Cucumis melo HOM05D006347 ORTHO05D007835 3.5e-119 433.0 563 46.0
Cc01_g10020 Coffea canephora HOM05D006347 ORTHO05D007835 6.0e-119 432.2 539 47.5
TPR.G32394 Trifolium pratense HOM05D006347 ORTHO05D007835 5.1e-118 429.1 508 47.4
arahy.Tifrunner.gnm1.ann1.PRK8FW Arachis hypogaea HOM05D006347 ORTHO05D007835 6.6e-118 428.7 518 46.9
Psat5g253920 Pisum sativum HOM05D006347 ORTHO05D007835 6.6e-118 428.7 528 47.7
FvH4_3g29990 Fragaria vesca HOM05D006347 ORTHO05D007835 8.7e-118 428.3 539 46.8
vmacro03233 Vaccinium macrocarpon HOM05D006347 ORTHO05D007835 1.5e-117 427.6 569 45.3
CAN.G1432.26 Capsicum annuum HOM05D006347 ORTHO05D007835 3.3e-117 426.4 511 48.7
Medtr2g084580 Medicago truncatula HOM05D006347 ORTHO05D007835 7.3e-117 425.2 509 46.8
PGR119G2351 Punica granatum HOM05D006347 ORTHO05D007835 8.1e-116 421.8 512 47.9
Nitab4.5_0005038g0010 Nicotiana tabacum HOM05D006347 ORTHO05D007835 1.4e-115 421.0 466 50.9
AUR62023970 Chenopodium quinoa HOM05D006347 ORTHO05D007835 1.8e-115 420.6 475 50.1
Peaxi162Scf00157g00213 Petunia axillaris HOM05D006347 ORTHO05D007835 2.4e-115 420.2 534 47.4
MSTRG.18715 Avicennia marina HOM05D006347 ORTHO05D007835 6.9e-115 418.7 509 47.0
FAN21G3835 Fragaria x ananassa HOM05D006347 ORTHO05D007835 9.0e-115 418.3 556 45.1
EL10Ac9g21046 Beta vulgaris HOM05D006347 ORTHO05D007835 1.2e-114 417.9 526 47.0
SalBow6G0094 Salvia bowleyana HOM05D006347 ORTHO05D007835 5.8e-114 415.6 526 47.9
Lj2A998T24 Lonicera japonica HOM05D006347 ORTHO05D007835 1.3e-113 414.5 534 46.6
CANSAT56G1452 Cannabis sativa HOM05D006347 ORTHO05D007835 3.8e-113 412.9 518 46.9
FAN11G3746 Fragaria x ananassa HOM05D006347 ORTHO05D007835 3.8e-113 412.9 545 45.1
ClCG02G021770 Citrullus lanatus HOM05D006347 ORTHO05D007835 6.4e-113 412.1 470 49.6
FAN25G1668 Fragaria x ananassa HOM05D006347 ORTHO05D007835 5.4e-112 409.1 554 45.8
Solyc06g074690.3 Solanum lycopersicum HOM05D006347 ORTHO05D007835 1.2e-111 407.9 579 44.9
BcaB05g22687 Brassica carinata HOM05D006347 ORTHO05D007835 6.0e-111 405.6 504 44.2
Carub.0006s2054 Capsella rubella HOM05D006347 ORTHO05D007835 5.1e-110 402.5 500 45.0
Cfa021537 Carpinus fangiana HOM05D006347 ORTHO05D007835 5.1e-110 402.5 543 45.9
Phvul.005G128700 Phaseolus vulgaris HOM05D006347 ORTHO05D007835 6.7e-110 402.1 398 52.3
TAR633G1474 Trochodendron aralioides HOM05D006347 ORTHO05D007835 6.7e-110 402.1 357 61.6
Thhalv10013199m.g Eutrema salsugineum HOM05D006347 ORTHO05D007835 1.1e-109 401.4 526 44.3
AL6G33930 Arabidopsis lyrata HOM05D006347 ORTHO05D007835 1.3e-108 397.9 498 45.0
AT5G22820 Arabidopsis thaliana HOM05D006347 ORTHO05D007835 1.3e-108 397.9 500 44.2
THA.LOC104810888 Tarenaya hassleriana HOM05D006347 ORTHO05D007835 1.3e-108 397.9 500 44.8
Sp6g22600 Schrenkiella parvula HOM05D006347 ORTHO05D007835 2.1e-108 397.1 499 44.3
Hma1.2p1_0884F.1_g232440 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 1.2e-106 391.3 448 50.0
CARHR190750 Cardamine hirsuta HOM05D006347 ORTHO05D007835 2.0e-106 390.6 512 44.1
HanXRQChr07g0197561 Helianthus annuus HOM05D006347 ORTHO05D007835 2.0e-106 390.6 472 47.0
SGA_v2.0_scaffold27G11587 Striga asiatica HOM05D006347 ORTHO05D007835 7.6e-106 388.7 507 44.6
Migut.D02321 Erythranthe guttata HOM05D006347 ORTHO05D007835 1.9e-104 384.0 501 44.1
Nitab4.5_0003470g0080 Nicotiana tabacum HOM05D006347 ORTHO05D007835 4.2e-104 382.9 479 48.0
BcaC03g13920 Brassica carinata HOM05D006347 ORTHO05D007835 9.3e-104 381.7 505 43.6
PSO339G5358 Papaver somniferum HOM05D006347 ORTHO05D007835 6.0e-103 379.0 427 50.1
Rhsim13G0103600 Rhododendron simsii HOM05D006347 ORTHO05D007835 1.0e-102 378.3 379 53.8
arahy.Tifrunner.gnm1.ann1.9T0HEQ Arachis hypogaea HOM05D006347 ORTHO05D007835 5.1e-102 375.9 573 40.8
Ca_01691_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 9.6e-101 371.7 387 51.4
Ca_30937_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 9.6e-101 371.7 387 51.4
BNapus_Darmor_BZH_scaffold_38p00360 Brassica napus HOM05D006347 ORTHO05D007835 1.3e-100 371.3 511 43.2
C02p11300 Brassica napus HOM05D006347 ORTHO05D007835 2.8e-100 370.2 511 43.6
Haze_23489 Corylus avellana HOM05D006347 ORTHO05D007835 2.8e-100 370.2 406 50.5
BraA02t05690Z Brassica rapa HOM05D006347 ORTHO05D007835 9.0e-99 365.2 514 43.6
Haze_23473 Corylus avellana HOM05D006347 ORTHO05D007835 5.8e-98 362.5 501 45.5
BolC2t07198H Brassica oleracea HOM05D006347 ORTHO05D007835 1.0e-97 361.7 537 42.3
ATR0665G610 Amborella trichopoda HOM05D006347 ORTHO05D007835 4.9e-97 359.4 504 44.8
COL.COLO4_19257 Corchorus olitorius HOM05D006347 ORTHO05D007835 1.4e-96 357.8 568 43.0
Aa31LG1G12890 Aethionema arabicum HOM05D006347 ORTHO05D007835 1.2e-95 354.8 545 41.3
HPP92_014171 Vanilla planifolia HOM05D006347 ORTHO05D007835 7.4e-93 345.5 532 43.2
HPP92_014151 Vanilla planifolia HOM05D006347 ORTHO05D007835 2.4e-91 340.5 550 41.6
unitig_899.g14960 Utricularia gibba HOM05D006347 ORTHO05D007835 1.7e-84 317.8 575 37.4
Ah.01g016170 Amaranthus hybridus HOM05D006347 ORTHO05D007835 1.1e-80 305.1 407 44.5
Os03g0684100 Oryza sativa ssp. japonica HOM05D006347 ORTHO05D007835 4.4e-77 293.1 510 37.8
Haze_23492 Corylus avellana HOM05D006347 ORTHO05D007835 7.2e-72 275.8 411 42.6
Pp3c4_24670 Physcomitrium patens HOM05D006347 ORTHO05D007835 3.9e-70 270.0 522 35.1
Zm00001eb053190 Zea mays HOM05D006347 ORTHO05D007835 9.7e-69 265.4 379 41.4
Peaxi162Scf00755g00310 Petunia axillaris HOM05D006347 ORTHO05D007835 7.7e-66 255.8 454 39.6
AagrBONN_evm.TU.Sc2ySwM_117.1516 Anthoceros agrestis HOM05D006347 ORTHO05D007835 1.1e-64 251.9 405 39.0
CBR_g54933 Chara braunii HOM05D006347 ORTHO05D007835 4.4e-61 240.0 411 37.0
Mapoly0004s0056 Marchantia polymorpha HOM05D006347 ORTHO05D007835 3.8e-57 226.9 378 38.4
Glyma.12G180067 Glycine max HOM05D006347 ORTHO05D007835 2.3e-54 217.6 200 56.5
FAN16G0411 Fragaria x ananassa HOM05D006347 ORTHO05D007835 1.6e-42 178.3 167 53.3
Glyma.12G180133 Glycine max HOM05D006347 ORTHO05D007835 2.5e-40 171.0 194 46.9
Haze_23495 Corylus avellana HOM05D006347 ORTHO05D007835 7.5e-37 159.5 260 40.0
Ah.01g016190 Amaranthus hybridus HOM05D006347 ORTHO05D007835 6.4e-36 156.4 249 40.2
Cpa.g.sc47.36 Carica papaya HOM05D006347 ORTHO05D007835 3.2e-35 154.1 209 46.4
Haze_23480 Corylus avellana HOM05D006347 ORTHO05D007835 4.1e-35 153.7 217 44.7
CSS0047528 Camellia sinensis var. sinensis HOM05D006347 ORTHO05D007835 3.6e-31 140.6 220 38.2
CDE02G2671 Ceratophyllum demersum HOM05D006347 ORTHO05D007835 3.1e-30 137.5 519 25.8
SMO265G0001 Selaginella moellendorffii HOM05D006347 ORTHO05D007835 2.4e-27 127.9 193 38.3
TAR633G2060 Trochodendron aralioides HOM05D006347 ORTHO05D007835 8.1e-23 112.8 93 65.6
Hund07723 Selenicereus undatus HOM05D006347 ORTHO05D007835 9.9e-13 79.3 137 41.6
SEGI_13685 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 9.9e-13 79.3 97 46.4
CSS0039987 Camellia sinensis var. sinensis HOM05D006347 ORTHO05D007835 1.1e-08 65.9 65 56.9
SEGI_37044 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 6.2e-07 60.1 89 38.2
SEGI_35353 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 1.8e-06 58.5 70 47.1
BcaC02g08433 Brassica carinata HOM05D000452 ORTHO05D005748 6.9e-06 56.6 128 35.2


User provided reference genes

Program Settings