Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G01006 Aquilegia oxysepala HOM05D006485 ORTHO05D006108 1.6e-114 417.5 554 100.0
TAR623G0376 Trochodendron aralioides HOM05D006485 ORTHO05D006108 2.8e-15 87.8 105 46.7
FAN09G4412 Fragaria x ananassa HOM05D006485 ORTHO05D006108 5.9e-13 80.1 138 36.2
CSS0031113 Camellia sinensis var. sinensis HOM05D006485 ORTHO05D006108 7.7e-13 79.7 165 37.0
FAN09G1969 Fragaria x ananassa HOM05D006485 ORTHO05D006108 7.7e-13 79.7 201 33.3
PSO063G6051 Papaver somniferum HOM05D006485 ORTHO05D006108 7.7e-13 79.7 143 39.9
PSO339G3752 Papaver somniferum HOM05D006485 ORTHO05D006108 1.3e-12 79.0 151 39.7
FAN14G0187 Fragaria x ananassa HOM05D006485 ORTHO05D006108 2.2e-12 78.2 121 38.0
FAN05G3442 Fragaria x ananassa HOM05D006485 ORTHO05D006108 3.8e-12 77.4 98 41.8
FAN02G3096 Fragaria x ananassa HOM05D006485 ORTHO05D006108 8.5e-12 76.3 191 33.0
TWI53G1251 Tripterygium wilfordii HOM05D006485 ORTHO05D006108 8.5e-12 76.3 172 36.6
Sc02g0001270 Simmondsia chinensis HOM05D006485 ORTHO05D006108 3.2e-11 74.3 177 33.9
FAN05G4746 Fragaria x ananassa HOM05D006485 ORTHO05D006108 4.2e-11 73.9 121 34.7
A04p06430 Brassica napus HOM05D006485 ORTHO05D006108 4.7e-10 70.5 88 45.5
BraA04t16347Z Brassica rapa HOM05D006485 ORTHO05D006108 4.7e-10 70.5 88 45.5
Aa31LG5G21840 Aethionema arabicum HOM05D006485 ORTHO05D006108 8.0e-10 69.7 83 49.4
Thhalv10017525m.g Eutrema salsugineum HOM05D006485 ORTHO05D006108 8.0e-10 69.7 91 44.0
Prupe.7G121500 Prunus persica HOM05D006485 ORTHO05D006108 8.0e-10 69.7 106 40.6
BcaB02g08540 Brassica carinata HOM05D006485 ORTHO05D006108 1.8e-09 68.6 91 42.9
Hund12313 Selenicereus undatus HOM05D006485 ORTHO05D006108 1.8e-09 68.6 134 37.3
Atru.chr8.1691 Acer truncatum HOM05D006485 ORTHO05D006108 2.3e-09 68.2 127 37.0
BcaC02g09194 Brassica carinata HOM05D006485 ORTHO05D006108 3.0e-09 67.8 86 47.7
C04p39920 Brassica napus HOM05D006485 ORTHO05D006108 3.0e-09 67.8 83 49.4
BolC4t25563H Brassica oleracea HOM05D006485 ORTHO05D006108 3.0e-09 67.8 86 47.7
Carub.0004s1846 Capsella rubella HOM05D006485 ORTHO05D006108 4.0e-09 67.4 168 33.9
Eucgr.A01582 Eucalyptus grandis HOM05D006485 ORTHO05D006108 4.0e-09 67.4 102 47.1
Sp4g18920 Schrenkiella parvula HOM05D006485 ORTHO05D006108 4.0e-09 67.4 106 40.6
AT2G36640 Arabidopsis thaliana HOM05D006485 ORTHO05D006108 8.8e-09 66.2 83 43.4
A05p09230 Brassica napus HOM05D006485 ORTHO05D006108 8.8e-09 66.2 85 44.7
Thhalv10010945m.g Eutrema salsugineum HOM05D006485 ORTHO05D006108 2.6e-08 64.7 83 42.2
Manes.08G018000 Manihot esculenta HOM05D006485 ORTHO05D006108 3.3e-08 64.3 90 44.4
Nn2g13931 Nelumbo nucifera HOM05D006485 ORTHO05D006108 3.3e-08 64.3 186 32.3
Potri.015G060600 Populus trichocarpa HOM05D006485 ORTHO05D006108 4.4e-08 63.9 119 34.5
PGR004G2529 Punica granatum HOM05D006485 ORTHO05D006108 7.5e-08 63.2 114 39.5
AL5G33870 Arabidopsis lyrata HOM05D006485 ORTHO05D006108 9.7e-08 62.8 79 45.6
Lj3C1005T3 Lonicera japonica HOM05D011389 ORTHO05D006108 1.3e-07 62.4 130 34.6
Sp5g09280 Schrenkiella parvula HOM05D006485 ORTHO05D006108 1.7e-07 62.0 86 44.2
EL10Ac7g16753 Beta vulgaris HOM05D006485 ORTHO05D006108 2.2e-07 61.6 103 40.8
Carub.0005s1954 Capsella rubella HOM05D006485 ORTHO05D006108 2.2e-07 61.6 80 41.2
AL4G32820 Arabidopsis lyrata HOM05D006485 ORTHO05D006108 4.8e-07 60.5 82 41.5
Cfa016502 Carpinus fangiana HOM05D006485 ORTHO05D006108 4.8e-07 60.5 68 47.1
SalBow5G2944 Salvia bowleyana HOM05D006485 ORTHO05D006108 4.8e-07 60.5 153 31.4
Haze_19505 Corylus avellana HOM05D006485 ORTHO05D006108 6.3e-07 60.1 177 33.9
FvH4_6g17400 Fragaria vesca HOM05D006485 ORTHO05D006108 8.2e-07 59.7 121 33.1
Ah.15g091240 Amaranthus hybridus HOM05D011389 ORTHO05D006108 1.1e-06 59.3 166 33.1
Ciclev10013512m.g Citrus clementina HOM05D006485 ORTHO05D006108 1.1e-06 59.3 170 35.3
Peaxi162Scf00500g00067 Petunia axillaris HOM05D006485 ORTHO05D006108 1.1e-06 59.3 117 36.8
Nitab4.5_0000680g0110 Nicotiana tabacum HOM05D006485 ORTHO05D006108 1.4e-06 58.9 147 34.7
AT3G53040 Arabidopsis thaliana HOM05D006485 ORTHO05D006108 1.8e-06 58.5 78 42.3
MD09G1267600 Malus domestica HOM05D006485 ORTHO05D006108 1.8e-06 58.5 103 36.9
RcHm_v2.0_Chr3g0471651 Rosa chinensis HOM05D006485 ORTHO05D006108 2.4e-06 58.2 114 35.1
Cfa016504 Carpinus fangiana HOM05D006485 ORTHO05D006108 3.1e-06 57.8 76 44.7
AUR62040165 Chenopodium quinoa HOM05D006485 ORTHO05D006108 3.1e-06 57.8 101 37.6
AUR62037914 Chenopodium quinoa HOM05D006485 ORTHO05D006108 9.1e-06 56.2 92 40.2
Migut.L01738 Erythranthe guttata HOM05D013674 ORTHO05D006108 9.1e-06 56.2 147 32.7


User provided reference genes

Program Settings