Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G00982 Aquilegia oxysepala HOM05D001764 ORTHO05D078748 1.4e-159 566.2 286 100.0
Lsat_1_v5_gn_6_72980 Lactuca sativa HOM05D001764 ORTHO05D001946 2.8e-11 73.6 188 26.6
Prupe.5G197600 Prunus persica HOM05D001764 ORTHO05D001946 6.3e-11 72.4 169 27.2
Lsat_1_v5_gn_5_21501 Lactuca sativa HOM05D001764 ORTHO05D001946 1.8e-10 70.9 204 27.9
TAR217G0002 Trochodendron aralioides HOM05D001764 ORTHO05D001946 2.4e-10 70.5 148 31.1
HanXRQChr05g0155001 Helianthus annuus HOM05D001764 ORTHO05D001946 5.4e-10 69.3 212 25.9
HanXRQChr13g0404871 Helianthus annuus HOM05D001764 ORTHO05D001946 1.6e-09 67.8 188 26.1
arahy.Tifrunner.gnm1.ann1.V14QW9 Arachis hypogaea HOM05D001764 ORTHO05D001946 2.0e-09 67.4 190 27.4
CsaV3_6G045640 Cucumis sativus L. HOM05D001764 ORTHO05D001946 2.7e-09 67.0 191 27.7
HanXRQChr03g0081931 Helianthus annuus HOM05D001764 ORTHO05D001946 4.5e-09 66.2 188 26.6
CANSAT01G0426 Cannabis sativa HOM05D001764 ORTHO05D001946 5.9e-09 65.9 165 29.1
ECA246G0801 Erigeron canadensis HOM05D001764 ORTHO05D001946 5.9e-09 65.9 195 25.6
MD14G1204000 Malus domestica HOM05D001764 ORTHO05D001946 5.9e-09 65.9 224 26.3
HanXRQChr08g0236671 Helianthus annuus HOM05D001764 ORTHO05D001946 7.8e-09 65.5 209 25.8
BraA07t31565Z Brassica rapa HOM05D001764 ORTHO05D001946 1.0e-08 65.1 165 26.1
CAN.G479.64 Capsicum annuum HOM05D001764 ORTHO05D001946 1.0e-08 65.1 241 25.7
Lsat_1_v5_gn_4_109181 Lactuca sativa HOM05D001764 ORTHO05D001946 1.0e-08 65.1 168 26.2
MD06G1197200 Malus domestica HOM05D001764 ORTHO05D001946 1.0e-08 65.1 185 27.0
Dinv38741 Davidia involucrata HOM05D001764 ORTHO05D001946 1.3e-08 64.7 195 24.6
Duzib205G0803 Durio zibethinus HOM05D001764 ORTHO05D001946 1.3e-08 64.7 165 26.1
ECA240G0456 Erigeron canadensis HOM05D001764 ORTHO05D001946 1.3e-08 64.7 188 25.0
BolC6t39884H Brassica oleracea HOM05D001764 ORTHO05D001946 1.7e-08 64.3 165 26.1
Lalb_Chr12g0203691 Lupinus albus HOM05D001764 ORTHO05D001946 1.7e-08 64.3 194 26.3
Psat7g052960 Pisum sativum HOM05D001764 ORTHO05D001946 1.7e-08 64.3 192 27.1
MELO3C007775.2 Cucumis melo HOM05D001764 ORTHO05D001946 2.3e-08 63.9 222 25.7
THA.LOC104824870 Tarenaya hassleriana HOM05D001764 ORTHO05D001946 2.3e-08 63.9 187 26.2
Sopen03g034760 Solanum pennellii HOM05D001764 ORTHO05D001946 2.9e-08 63.5 241 28.2
GSVIVG01007971001 Vitis vinifera HOM05D001764 ORTHO05D001946 3.8e-08 63.2 185 25.4
CDE02G0929 Ceratophyllum demersum HOM05D001764 ORTHO05D001946 5.0e-08 62.8 165 26.7
FvH4_5g14590 Fragaria vesca HOM05D001764 ORTHO05D001946 6.6e-08 62.4 187 25.7
Medtr8g091290 Medicago truncatula HOM05D001764 ORTHO05D001946 6.6e-08 62.4 189 27.0
RcHm_v2.0_Chr7g0181981 Rosa chinensis HOM05D001764 ORTHO05D001946 6.6e-08 62.4 187 25.7
Sc16g0005460 Simmondsia chinensis HOM05D001764 ORTHO05D001946 6.6e-08 62.4 167 28.1
PGSC0003DMG400019519 Solanum tuberosum HOM05D001764 ORTHO05D001946 6.6e-08 62.4 241 27.8
A07p40200 Brassica napus HOM05D001764 ORTHO05D001946 8.6e-08 62.0 165 24.8
Carub.0002s2116 Capsella rubella HOM05D001764 ORTHO05D001946 8.6e-08 62.0 165 25.5
AUR62003764 Chenopodium quinoa HOM05D001764 ORTHO05D001946 8.6e-08 62.0 200 23.5
Haze_07296 Corylus avellana HOM05D001764 ORTHO05D001946 8.6e-08 62.0 187 24.6
FAN18G3859 Fragaria x ananassa HOM05D001764 ORTHO05D001946 8.6e-08 62.0 187 25.7
FAN19G0108 Fragaria x ananassa HOM05D001764 ORTHO05D001946 8.6e-08 62.0 212 24.5
Lj5A108T58 Lonicera japonica HOM05D001764 ORTHO05D001946 8.6e-08 62.0 176 26.1
Nitab4.5_0005900g0080 Nicotiana tabacum HOM05D001764 ORTHO05D001946 8.6e-08 62.0 239 25.1
TAR371G1169 Trochodendron aralioides HOM05D001764 ORTHO05D001946 8.6e-08 62.0 205 26.3
Haze_07295 Corylus avellana HOM05D001764 ORTHO05D003857 1.1e-07 61.6 167 26.3
Dinv10651 Davidia involucrata HOM05D001764 ORTHO05D001946 1.1e-07 61.6 195 24.6
MD14G1204300 Malus domestica HOM05D001764 ORTHO05D001946 1.1e-07 61.6 197 25.4
Nitab4.5_0001997g0090 Nicotiana tabacum HOM05D001764 ORTHO05D001946 1.1e-07 61.6 229 24.9
PGR004G1214 Punica granatum HOM05D001764 ORTHO05D001946 1.1e-07 61.6 165 24.2
PGR083G1358 Punica granatum HOM05D001764 ORTHO05D001946 1.1e-07 61.6 165 25.5
Eucgr.B00534 Eucalyptus grandis HOM05D001764 ORTHO05D001946 1.5e-07 61.2 185 25.9
Thhalv10000648m.g Eutrema salsugineum HOM05D001764 ORTHO05D001946 1.5e-07 61.2 187 26.2
AUR62002032 Chenopodium quinoa HOM05D001764 ORTHO05D001946 1.9e-07 60.8 222 22.5
FvH4_1g21490 Fragaria vesca HOM05D001764 ORTHO05D001946 1.9e-07 60.8 212 24.5
Glyma.08G138700 Glycine max HOM05D001764 ORTHO05D001946 1.9e-07 60.8 188 25.0
MD15G1329100 Malus domestica HOM05D001764 ORTHO05D001946 1.9e-07 60.8 165 24.8
VMungo0251G0186 Vigna mungo HOM05D001764 ORTHO05D001946 1.9e-07 60.8 188 24.5
BraA01t00077Z Brassica rapa HOM05D001764 ORTHO05D001946 2.5e-07 60.5 224 24.6
Cpa.g.sc111.56 Carica papaya HOM05D001764 ORTHO05D001946 2.5e-07 60.5 194 24.7
Duzib068G0120 Durio zibethinus HOM05D001764 ORTHO05D001946 2.5e-07 60.5 208 24.0
Eucgr.K01201 Eucalyptus grandis HOM05D001764 ORTHO05D001946 2.5e-07 60.5 217 25.3
C06p48550 Brassica napus HOM05D001764 ORTHO05D001946 3.3e-07 60.1 165 24.8
Lj4g0003283 Lotus japonicus HOM05D001764 ORTHO05D001946 3.3e-07 60.1 193 25.4
Sabra05G0065100 Salix brachista HOM05D001764 ORTHO05D001946 3.3e-07 60.1 165 26.1
Hund13499 Selenicereus undatus HOM05D001764 ORTHO05D001946 3.3e-07 60.1 193 24.4
Solyc03g115780.2 Solanum lycopersicum HOM05D001764 ORTHO05D001946 3.3e-07 60.1 241 27.8
PGSC0003DMG400021376 Solanum tuberosum HOM05D001764 ORTHO05D001946 3.3e-07 60.1 175 27.4
SGA_v2.0_scaffold47G17752 Striga asiatica HOM05D001764 ORTHO05D001946 3.3e-07 60.1 190 26.8
TWI53G1339 Tripterygium wilfordii HOM05D001764 ORTHO05D001946 3.3e-07 60.1 165 26.1
Phvul.002G262000 Phaseolus vulgaris HOM05D001764 ORTHO05D001946 4.3e-07 59.7 188 25.0
TAR217G0001 Trochodendron aralioides HOM05D001764 ORTHO05D001946 4.3e-07 59.7 230 25.7
EL10Ac6g15071 Beta vulgaris HOM05D001764 ORTHO05D001946 5.6e-07 59.3 185 25.9
Lsat_1_v5_gn_4_109301 Lactuca sativa HOM05D001764 ORTHO05D001946 5.6e-07 59.3 165 25.5
PGSC0003DMG400021936 Solanum tuberosum HOM05D001764 ORTHO05D001946 5.6e-07 59.3 196 26.5
CiPaw.11G047000 Carya illinoinensis HOM05D001764 ORTHO05D001946 7.3e-07 58.9 212 24.5
Gohir.A11G031900 Gossypium hirsutum HOM05D001764 ORTHO05D001946 7.3e-07 58.9 189 25.4
Lalb_Chr07g0185031 Lupinus albus HOM05D001764 ORTHO05D001946 7.3e-07 58.9 251 23.1
Rhsim08G0008900 Rhododendron simsii HOM05D001764 ORTHO05D001946 9.5e-07 58.5 165 25.5
Sopen04g024470 Solanum pennellii HOM05D001764 ORTHO05D001946 9.5e-07 58.5 204 26.0
Sopen12g016340 Solanum pennellii HOM05D001764 ORTHO05D001946 9.5e-07 58.5 205 24.4
TAR374G0441 Trochodendron aralioides HOM05D001764 ORTHO05D001946 9.5e-07 58.5 185 25.4
BcaNung05327 Brassica carinata HOM05D001764 ORTHO05D001946 1.2e-06 58.2 171 26.3
BolC3t20093H Brassica oleracea HOM05D001764 ORTHO05D001946 1.2e-06 58.2 171 26.3
Carub.0007s0172 Capsella rubella HOM05D001764 ORTHO05D001946 1.2e-06 58.2 165 26.1
CiPaw.04G096700 Carya illinoinensis HOM05D001764 ORTHO05D001946 1.2e-06 58.2 186 24.2
Sed0016998 Sechium edule HOM05D001764 ORTHO05D001946 1.2e-06 58.2 185 23.2
C03p78330 Brassica napus HOM05D001764 ORTHO05D001946 1.6e-06 57.8 171 26.3
CSS0023502 Camellia sinensis var. sinensis HOM05D001764 ORTHO05D001946 1.6e-06 57.8 194 23.7
CDE08G0978 Ceratophyllum demersum HOM05D001764 ORTHO05D001946 1.6e-06 57.8 206 24.8
CsaV3_1G002520 Cucumis sativus L. HOM05D001764 ORTHO05D001946 1.6e-06 57.8 185 23.2
DCAR_016575 Daucus carota HOM05D001764 ORTHO05D001946 1.6e-06 57.8 202 23.3
Gohir.A12G179400 Gossypium hirsutum HOM05D001764 ORTHO05D001946 1.6e-06 57.8 193 24.4
QL93p0356_0066 Quercus lobata HOM05D001764 ORTHO05D001946 1.6e-06 57.8 213 23.0
Atru.chr4.225 Acer truncatum HOM05D001764 ORTHO05D001946 2.1e-06 57.4 188 23.4
CAN.G847.2 Capsicum annuum HOM05D001764 ORTHO05D001946 2.1e-06 57.4 167 26.3
Nn4g23270 Nelumbo nucifera HOM05D001764 ORTHO05D001946 2.1e-06 57.4 210 24.8
Solyc04g054720.4 Solanum lycopersicum HOM05D001764 ORTHO05D001946 2.1e-06 57.4 204 26.0
Aa31LG6G15460 Aethionema arabicum HOM05D001764 ORTHO05D001946 2.8e-06 57.0 238 21.8
ATR0564G211 Amborella trichopoda HOM05D001764 ORTHO05D001946 2.8e-06 57.0 196 24.0
Ciclev10026247m.g Citrus clementina HOM05D001764 ORTHO05D001946 2.8e-06 57.0 187 24.6
Rhsim12G0154300 Rhododendron simsii HOM05D001764 ORTHO05D001946 2.8e-06 57.0 201 24.9
A01p00730 Brassica napus HOM05D001764 ORTHO05D001946 3.6e-06 56.6 224 24.1
CDE09G0781 Ceratophyllum demersum HOM05D001764 ORTHO05D001946 3.6e-06 56.6 189 25.9
Thhalv10018430m.g Eutrema salsugineum HOM05D001764 ORTHO05D001946 3.6e-06 56.6 165 23.6
FAN26G1618 Fragaria x ananassa HOM05D001764 ORTHO05D001946 3.6e-06 56.6 243 23.9
SHI11586 Sapria himalayana HOM05D001764 ORTHO05D001946 3.6e-06 56.6 103 25.2
AT1G74390 Arabidopsis thaliana HOM05D001764 ORTHO05D001946 4.7e-06 56.2 165 24.8
A08p23340 Brassica napus HOM05D001764 ORTHO05D001946 4.7e-06 56.2 171 25.7
BraA08t34288Z Brassica rapa HOM05D001764 ORTHO05D001946 4.7e-06 56.2 171 25.7
Gohir.D03G043900 Gossypium hirsutum HOM05D001764 ORTHO05D001946 4.7e-06 56.2 236 23.3
Gorai.003G044900 Gossypium raimondii HOM05D001764 ORTHO05D001946 4.7e-06 56.2 236 23.3
Solyc12g036220.3 Solanum lycopersicum HOM05D001764 ORTHO05D001946 4.7e-06 56.2 205 24.4
BolC1t00085H Brassica oleracea HOM05D001764 ORTHO05D001946 6.1e-06 55.8 235 22.1
Gohir.A02G132500 Gossypium hirsutum HOM05D001764 ORTHO05D001946 6.1e-06 55.8 236 23.3
Nn3g17322 Nelumbo nucifera HOM05D001764 ORTHO05D001946 8.0e-06 55.5 214 22.9
Sp5g29550 Schrenkiella parvula HOM05D001764 ORTHO05D001946 8.0e-06 55.5 165 24.2
vmacro16525 Vaccinium macrocarpon HOM05D001764 ORTHO05D001946 8.0e-06 55.5 165 23.6
vmacro18615 Vaccinium macrocarpon HOM05D001764 ORTHO05D001946 8.0e-06 55.5 165 25.5


User provided reference genes

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