Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G00927 Aquilegia oxysepala HOM05D005444 ORTHO05D006773 4.1e-72 274.6 138 100.0
Dinv17019 Davidia involucrata HOM05D005444 ORTHO05D006773 6.1e-44 181.0 132 72.7
Dinv42967 Davidia involucrata HOM05D005444 ORTHO05D006773 6.1e-44 181.0 132 72.7
Dinv43132 Davidia involucrata HOM05D005444 ORTHO05D006773 6.1e-44 181.0 132 72.7
PSO063G3487 Papaver somniferum HOM05D005444 ORTHO05D006773 9.8e-42 173.7 117 76.9
PSO339G5422 Papaver somniferum HOM05D005444 ORTHO05D006773 1.1e-40 170.2 111 79.3
TAR633G2200 Trochodendron aralioides HOM05D005444 ORTHO05D006773 1.1e-40 170.2 125 75.2
Dinv04178 Davidia involucrata HOM05D005444 ORTHO05D006773 7.0e-40 167.5 121 72.7
Manes.02G131500 Manihot esculenta HOM05D005444 ORTHO05D006773 1.6e-39 166.4 123 69.9
AL8G35870 Arabidopsis lyrata HOM05D005444 ORTHO05D006773 7.7e-39 164.1 118 66.1
GSVIVG01024939001 Vitis vinifera HOM05D005444 ORTHO05D006773 7.7e-39 164.1 129 65.1
AT5G59400 Arabidopsis thaliana HOM05D005444 ORTHO05D006773 2.2e-38 162.5 118 65.3
BcaC04g19778 Brassica carinata HOM05D005444 ORTHO05D006773 5.0e-38 161.4 116 68.1
C09p51810 Brassica napus HOM05D005444 ORTHO05D006773 5.0e-38 161.4 116 68.1
BolC9t58042H Brassica oleracea HOM05D005444 ORTHO05D006773 5.0e-38 161.4 116 68.1
Cpa.g.sc81.131 Carica papaya HOM05D005444 ORTHO05D006773 8.5e-38 160.6 122 64.8
Thhalv10014435m.g Eutrema salsugineum HOM05D005444 ORTHO05D006773 8.5e-38 160.6 118 66.9
Sp6g21080 Schrenkiella parvula HOM05D005444 ORTHO05D006773 1.1e-37 160.2 116 68.1
Aa31sc23G420 Aethionema arabicum HOM05D005444 ORTHO05D006773 2.5e-37 159.1 118 66.1
CANSAT54G1668 Cannabis sativa HOM05D005444 ORTHO05D006773 2.5e-37 159.1 120 68.3
A10p16600 Brassica napus HOM05D005444 ORTHO05D006773 3.2e-37 158.7 131 61.8
BraA10t43744Z Brassica rapa HOM05D005444 ORTHO05D006773 3.2e-37 158.7 131 61.8
Carub.0008s2007 Capsella rubella HOM05D005444 ORTHO05D006773 3.2e-37 158.7 118 65.3
Ciclev10028946m.g Citrus clementina HOM05D005444 ORTHO05D006773 3.2e-37 158.7 123 65.9
QL01p031522 Quercus lobata HOM05D005444 ORTHO05D006773 5.5e-37 157.9 124 67.7
Actinidia34411 Actinidia chinensis HOM05D005444 ORTHO05D006773 9.4e-37 157.1 100 76.0
vmacro14541 Vaccinium macrocarpon HOM05D005444 ORTHO05D006773 1.6e-36 156.4 120 70.0
Lj1A150T42 Lonicera japonica HOM05D005444 ORTHO05D006773 2.1e-36 156.0 126 63.5
MD03G1090200 Malus domestica HOM05D005444 ORTHO05D006773 2.1e-36 156.0 108 74.1
Rhsim01G0229400 Rhododendron simsii HOM05D005444 ORTHO05D006773 2.7e-36 155.6 122 69.7
HanXRQChr05g0135061 Helianthus annuus HOM05D005444 ORTHO05D006773 3.6e-36 155.2 122 64.8
SGA_v2.0_scaffold203G41535 Striga asiatica HOM05D005444 ORTHO05D006773 4.7e-36 154.8 100 75.0
Thecc.09G320000 Theobroma cacao HOM05D005444 ORTHO05D006773 4.7e-36 154.8 100 74.0
TWI79G0937 Tripterygium wilfordii HOM05D005444 ORTHO05D006773 4.7e-36 154.8 99 76.8
BcaB08g36261 Brassica carinata HOM05D005444 ORTHO05D006773 6.1e-36 154.5 130 63.1
CiPaw.13G092700 Carya illinoinensis HOM05D005444 ORTHO05D006773 6.1e-36 154.5 111 71.2
Haze_24114 Corylus avellana HOM05D005444 ORTHO05D006773 6.1e-36 154.5 129 64.3
Prupe.6G074400 Prunus persica HOM05D005444 ORTHO05D006773 6.1e-36 154.5 126 65.1
Duzib168G1171 Durio zibethinus HOM05D005444 ORTHO05D006773 8.0e-36 154.1 100 73.0
Cfa011517 Carpinus fangiana HOM05D005444 ORTHO05D006773 1.0e-35 153.7 129 64.3
Atru.chr3.3946 Acer truncatum HOM05D005444 ORTHO05D006773 1.4e-35 153.3 115 64.3
Cc01_g13010 Coffea canephora HOM05D005444 ORTHO05D006773 1.4e-35 153.3 124 66.1
ECA236G0569 Erigeron canadensis HOM05D005444 ORTHO05D006773 1.4e-35 153.3 128 64.8
Lsat_1_v5_gn_8_73500 Lactuca sativa HOM05D005444 ORTHO05D006773 1.8e-35 152.9 127 65.4
Oeu002422.1 Olea europaea HOM05D005444 ORTHO05D006773 1.8e-35 152.9 112 67.0
Oeu017397.1 Olea europaea HOM05D005444 ORTHO05D006773 1.8e-35 152.9 112 65.2
Gohir.A07G098900 Gossypium hirsutum HOM05D005444 ORTHO05D006773 2.3e-35 152.5 102 73.5
MD11G1099800 Malus domestica HOM05D005444 ORTHO05D006773 2.3e-35 152.5 115 66.1
Sc21g0005860 Simmondsia chinensis HOM05D005444 ORTHO05D006773 2.3e-35 152.5 100 72.0
Gohir.D07G103400 Gossypium hirsutum HOM05D005444 ORTHO05D006773 3.0e-35 152.1 102 72.5
Gorai.001G111300 Gossypium raimondii HOM05D005444 ORTHO05D006773 3.0e-35 152.1 102 72.5
Nitab4.5_0000463g0210 Nicotiana tabacum HOM05D005444 ORTHO05D006773 3.0e-35 152.1 111 66.7
Peaxi162Scf00774g00121 Petunia axillaris HOM05D005444 ORTHO05D006773 4.0e-35 151.8 114 66.7
Psat5g286680 Pisum sativum HOM05D005444 ORTHO05D006773 4.0e-35 151.8 113 69.0
Sed0025445 Sechium edule HOM05D005444 ORTHO05D006773 4.0e-35 151.8 129 63.6
CSS0026048 Camellia sinensis var. sinensis HOM05D005444 ORTHO05D006773 8.8e-35 150.6 120 67.5
AUR62009560 Chenopodium quinoa HOM05D005444 ORTHO05D006773 8.8e-35 150.6 115 63.5
FvH4_3g36480 Fragaria vesca HOM05D005444 ORTHO05D006773 1.2e-34 150.2 100 75.0
FAN11G0832 Fragaria x ananassa HOM05D005444 ORTHO05D006773 2.0e-34 149.4 121 66.1
FAN25G3546 Fragaria x ananassa HOM05D005444 ORTHO05D006773 2.6e-34 149.1 100 74.0
unitig_747.g22036 Utricularia gibba HOM05D005444 ORTHO05D006773 2.6e-34 149.1 83 80.7
FAN16G3284 Fragaria x ananassa HOM05D005444 ORTHO05D006773 3.4e-34 148.7 100 74.0
Nitab4.5_0001326g0170 Nicotiana tabacum HOM05D005444 ORTHO05D006773 3.4e-34 148.7 111 65.8
Sabra16G0145900 Salix brachista HOM05D005444 ORTHO05D006773 3.4e-34 148.7 96 76.0
MELO3C020623.2 Cucumis melo HOM05D005444 ORTHO05D006773 4.4e-34 148.3 125 61.6
Solyc06g076250.4 Solanum lycopersicum HOM05D005444 ORTHO05D006773 5.7e-34 147.9 111 66.7
Sopen06g032680 Solanum pennellii HOM05D005444 ORTHO05D006773 5.7e-34 147.9 111 66.7
TPR.G3768 Trifolium pratense HOM05D005444 ORTHO05D006773 5.7e-34 147.9 96 76.0
CsaV3_1G034350 Cucumis sativus L. HOM05D005444 ORTHO05D006773 7.5e-34 147.5 125 61.6
FAN21G3395 Fragaria x ananassa HOM05D005444 ORTHO05D006773 7.5e-34 147.5 100 74.0
Hund04946 Selenicereus undatus HOM05D005444 ORTHO05D006773 7.5e-34 147.5 127 58.3
Potri.001G241400 Populus trichocarpa HOM05D005444 ORTHO05D006773 9.8e-34 147.1 85 82.4
SEGI_38540 Sequoiadendron giganteum HOM05D005444 ORTHO05D006773 9.8e-34 147.1 96 70.8
ClCG03G001420 Citrullus lanatus HOM05D005444 ORTHO05D006773 1.7e-33 146.4 125 60.8
RcHm_v2.0_Chr5g0065341 Rosa chinensis HOM05D005444 ORTHO05D006773 2.2e-33 146.0 115 67.0
PGSC0003DMG401030323 Solanum tuberosum HOM05D005444 ORTHO05D006773 2.2e-33 146.0 111 65.8
CDE09G1090 Ceratophyllum demersum HOM05D005444 ORTHO05D006773 3.7e-33 145.2 115 61.7
Migut.D02083 Erythranthe guttata HOM05D005444 ORTHO05D006773 3.7e-33 145.2 116 65.5
CAN.G394.63 Capsicum annuum HOM05D005444 ORTHO05D006773 6.3e-33 144.4 114 64.0
Lj3g0017515 Lotus japonicus HOM05D005444 ORTHO05D006773 8.3e-33 144.1 75 86.7
EL10Ac7g16033 Beta vulgaris HOM05D005444 ORTHO05D006773 1.1e-32 143.7 77 83.1
CDE04G2637 Ceratophyllum demersum HOM05D005444 ORTHO05D006773 1.1e-32 143.7 85 74.1
COL.COLO4_18527 Corchorus olitorius HOM05D005444 ORTHO05D006773 1.1e-32 143.7 117 62.4
THA.LOC104810774 Tarenaya hassleriana HOM05D005444 ORTHO05D006773 1.1e-32 143.7 126 62.7
Ca_19148_v3 Cicer arietinum L. HOM05D005444 ORTHO05D006773 1.4e-32 143.3 113 63.7
HanXRQChr06g0178811 Helianthus annuus HOM05D005444 ORTHO05D006773 1.4e-32 143.3 124 60.5
SalBow3G1488 Salvia bowleyana HOM05D005444 ORTHO05D006773 1.4e-32 143.3 123 64.2
TPR.G34263 Trifolium pratense HOM05D005444 ORTHO05D006773 3.1e-32 142.1 109 67.0
Potri.009G032300 Populus trichocarpa HOM05D005444 ORTHO05D006773 4.1e-32 141.7 75 85.3
arahy.Tifrunner.gnm1.ann1.3F7RX4 Arachis hypogaea HOM05D005444 ORTHO05D006773 5.4e-32 141.4 119 58.8
arahy.Tifrunner.gnm1.ann1.XH3YCC Arachis hypogaea HOM05D005444 ORTHO05D006773 5.4e-32 141.4 119 58.8
arahy.Tifrunner.gnm1.ann1.9NI65Y Arachis hypogaea HOM05D005444 ORTHO05D006773 1.2e-31 140.2 99 71.7
arahy.Tifrunner.gnm1.ann1.T6ZDSA Arachis hypogaea HOM05D005444 ORTHO05D006773 1.2e-31 140.2 99 71.7
Sabra09G0022900 Salix brachista HOM05D005444 ORTHO05D006773 1.6e-31 139.8 84 76.2
ATR0559G091 Amborella trichopoda HOM05D005444 ORTHO05D006773 2.7e-31 139.0 124 62.9
Phvul.011G063700 Phaseolus vulgaris HOM05D005444 ORTHO05D006773 3.5e-31 138.7 97 71.1
Ah.15g097630 Amaranthus hybridus HOM05D005444 ORTHO05D006773 5.9e-31 137.9 127 55.9
Ca_01319_v3 Cicer arietinum L. HOM05D005444 ORTHO05D006773 5.9e-31 137.9 91 68.1
Eucgr.B02353 Eucalyptus grandis HOM05D005444 ORTHO05D006773 5.9e-31 137.9 103 67.0
Glyma.12G062600 Glycine max HOM05D005444 ORTHO05D006773 5.9e-31 137.9 97 70.1
Medtr2g097230 Medicago truncatula HOM05D005444 ORTHO05D006773 7.7e-31 137.5 126 55.6
Glyma.13G336800 Glycine max HOM05D005444 ORTHO05D006773 1.7e-30 136.3 102 62.7
Glyma.15G037500 Glycine max HOM05D005444 ORTHO05D006773 1.7e-30 136.3 99 63.6
Hund18899 Selenicereus undatus HOM05D005444 ORTHO05D006773 5.0e-30 134.8 135 57.0
Lalb_Chr01g0003631 Lupinus albus HOM05D005444 ORTHO05D006773 1.1e-29 133.7 99 64.6
Actinidia23933 Actinidia chinensis HOM05D000001 ORTHO05D000003 1.5e-29 133.3 106 64.2
Phvul.L006243 Phaseolus vulgaris HOM05D005444 ORTHO05D006773 2.5e-29 132.5 73 78.1
VMungo1127G0766 Vigna mungo HOM05D005444 ORTHO05D006773 3.3e-29 132.1 97 67.0
Pp3c1_24530 Physcomitrium patens HOM05D005444 ORTHO05D006773 2.1e-28 129.4 76 75.0
AagrBONN_evm.TU.Sc2ySwM_368.577 Anthoceros agrestis HOM05D005444 ORTHO05D006773 1.4e-27 126.7 75 74.7
Mapoly0050s0097 Marchantia polymorpha HOM05D005444 ORTHO05D006773 1.4e-27 126.7 90 64.4
Os05g0110800 Oryza sativa ssp. japonica HOM05D005444 ORTHO05D006773 6.8e-27 124.4 70 82.9
HanXRQChr06g0167871 Helianthus annuus HOM05D000219 ORTHO05D006773 1.5e-26 123.2 77 76.6
HanXRQChr10g0291051 Helianthus annuus HOM05D005444 ORTHO05D006773 1.5e-26 123.2 77 76.6
HanXRQChr10g0291061 Helianthus annuus HOM05D005444 ORTHO05D006773 1.5e-26 123.2 77 76.6
Pp3c14_5400 Physcomitrium patens HOM05D005444 ORTHO05D006773 7.5e-26 120.9 75 72.0
VMungo1080G1107 Vigna mungo HOM05D000758 ORTHO05D002867 9.8e-26 120.6 62 83.9
PGR102G1676 Punica granatum HOM05D005444 ORTHO05D006773 3.9e-22 108.6 104 59.6
HPP92_009462 Vanilla planifolia HOM05D005444 ORTHO05D006773 2.5e-21 105.9 57 82.5
Duzib170G0057 Durio zibethinus HOM05D005444 ORTHO05D006773 4.4e-18 95.1 50 86.0
AUR62001772 Chenopodium quinoa HOM05D005444 ORTHO05D006773 5.8e-18 94.7 115 48.7
MCO07G449 Micromonas commoda HOM05D005444 ORTHO05D006773 1.7e-17 93.2 74 56.8
AUR62031662 Chenopodium quinoa HOM05D001050 ORTHO05D001270 9.2e-16 87.4 75 56.0
Ah.15g097620 Amaranthus hybridus HOM05D005444 ORTHO05D006773 4.6e-15 85.1 57 66.7
TPR.G376 Trifolium pratense HOM05D025391 ORTHO05D030167 4.6e-15 85.1 52 69.2
Psat5g007960 Pisum sativum HOM05D005444 ORTHO05D006773 7.8e-15 84.3 72 58.3
Psat4g229040 Pisum sativum HOM05D005444 ORTHO05D006773 2.5e-13 79.3 46 76.1
BcaB01g04587 Brassica carinata HOM05D000021 ORTHO05D000010 2.9e-09 65.9 37 81.1
TPR.G1035 Trifolium pratense HOM05D005444 ORTHO05D006773 9.2e-08 60.8 29 89.7
Nitab4.5_0003274g0090 Nicotiana tabacum HOM05D003763 ORTHO05D004315 3.0e-06 55.8 54 46.3


User provided reference genes

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