Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G00926 Aquilegia oxysepala HOM05D005444 ORTHO05D006773 1.1e-81 306.6 154 100.0
Actinidia34411 Actinidia chinensis HOM05D005444 ORTHO05D006773 7.0e-49 197.6 155 63.9
PSO339G5422 Papaver somniferum HOM05D005444 ORTHO05D006773 2.7e-48 195.7 151 64.9
PSO063G3487 Papaver somniferum HOM05D005444 ORTHO05D006773 6.6e-47 191.0 151 62.9
CSS0026048 Camellia sinensis var. sinensis HOM05D005444 ORTHO05D006773 7.3e-46 187.6 154 62.3
Dinv04178 Davidia involucrata HOM05D005444 ORTHO05D006773 1.6e-45 186.4 150 61.3
Actinidia23933 Actinidia chinensis HOM05D000001 ORTHO05D000003 4.0e-44 181.8 149 59.1
Ciclev10028946m.g Citrus clementina HOM05D005444 ORTHO05D006773 1.2e-43 180.3 154 61.7
Haze_24114 Corylus avellana HOM05D005444 ORTHO05D006773 2.6e-43 179.1 155 60.0
Peaxi162Scf00774g00121 Petunia axillaris HOM05D005444 ORTHO05D006773 2.6e-43 179.1 152 59.9
AUR62001772 Chenopodium quinoa HOM05D005444 ORTHO05D006773 4.4e-43 178.3 149 59.1
CANSAT54G1668 Cannabis sativa HOM05D005444 ORTHO05D006773 7.5e-43 177.6 154 61.0
Sc21g0005860 Simmondsia chinensis HOM05D005444 ORTHO05D006773 9.8e-43 177.2 142 60.6
Cfa011517 Carpinus fangiana HOM05D005444 ORTHO05D006773 1.3e-42 176.8 155 60.0
Hund04946 Selenicereus undatus HOM05D005444 ORTHO05D006773 1.3e-42 176.8 150 58.0
CAN.G394.63 Capsicum annuum HOM05D005444 ORTHO05D006773 2.2e-42 176.0 152 57.2
Nitab4.5_0000463g0210 Nicotiana tabacum HOM05D005444 ORTHO05D006773 2.2e-42 176.0 152 57.2
Nitab4.5_0001326g0170 Nicotiana tabacum HOM05D005444 ORTHO05D006773 2.2e-42 176.0 152 57.2
PGR102G1676 Punica granatum HOM05D005444 ORTHO05D006773 4.9e-42 174.9 155 59.4
Solyc06g076250.4 Solanum lycopersicum HOM05D005444 ORTHO05D006773 4.9e-42 174.9 153 58.8
Sopen06g032680 Solanum pennellii HOM05D005444 ORTHO05D006773 4.9e-42 174.9 153 58.8
Potri.001G241400 Populus trichocarpa HOM05D005444 ORTHO05D006773 6.4e-42 174.5 152 60.5
AUR62009560 Chenopodium quinoa HOM05D005444 ORTHO05D006773 8.3e-42 174.1 149 57.7
Gohir.D07G103400 Gossypium hirsutum HOM05D005444 ORTHO05D006773 1.4e-41 173.3 154 56.5
ECA236G0569 Erigeron canadensis HOM05D005444 ORTHO05D006773 2.4e-41 172.6 153 54.9
Lsat_1_v5_gn_8_73500 Lactuca sativa HOM05D005444 ORTHO05D006773 2.4e-41 172.6 153 54.9
GSVIVG01024939001 Vitis vinifera HOM05D005444 ORTHO05D006773 2.4e-41 172.6 151 60.3
PGSC0003DMG401030323 Solanum tuberosum HOM05D005444 ORTHO05D006773 4.1e-41 171.8 153 58.2
PGSC0003DMG402030323 Solanum tuberosum HOM05D005444 ORTHO05D006773 4.1e-41 171.8 153 58.2
Gorai.001G111300 Gossypium raimondii HOM05D005444 ORTHO05D006773 5.4e-41 171.4 154 55.8
Manes.02G131500 Manihot esculenta HOM05D005444 ORTHO05D006773 5.4e-41 171.4 146 58.9
ATR0559G091 Amborella trichopoda HOM05D005444 ORTHO05D006773 7.1e-41 171.0 145 60.7
SGA_v2.0_scaffold203G41537 Striga asiatica HOM05D005444 ORTHO05D006773 7.1e-41 171.0 159 57.9
Migut.D02083 Erythranthe guttata HOM05D005444 ORTHO05D006773 9.2e-41 170.6 154 60.4
Sabra09G0022900 Salix brachista HOM05D005444 ORTHO05D006773 9.2e-41 170.6 145 61.4
Glyma.12G062600 Glycine max HOM05D005444 ORTHO05D006773 2.7e-40 169.1 150 56.7
Atru.chr3.3946 Acer truncatum HOM05D005444 ORTHO05D006773 6.0e-40 167.9 149 56.4
HanXRQChr05g0135061 Helianthus annuus HOM05D005444 ORTHO05D006773 6.0e-40 167.9 154 55.2
Rhsim01G0229400 Rhododendron simsii HOM05D005444 ORTHO05D006773 1.0e-39 167.2 153 57.5
VMungo1127G0766 Vigna mungo HOM05D005444 ORTHO05D006773 1.3e-39 166.8 150 55.3
Cc01_g13010 Coffea canephora HOM05D005444 ORTHO05D006773 2.3e-39 166.0 153 52.9
Gohir.A07G098900 Gossypium hirsutum HOM05D005444 ORTHO05D006773 2.3e-39 166.0 154 54.5
Medtr2g097230 Medicago truncatula HOM05D005444 ORTHO05D006773 3.0e-39 165.6 145 57.9
Eucgr.B02353 Eucalyptus grandis HOM05D005444 ORTHO05D006773 5.1e-39 164.9 155 55.5
SalBow3G1488 Salvia bowleyana HOM05D005444 ORTHO05D006773 8.6e-39 164.1 185 49.7
TAR633G2200 Trochodendron aralioides HOM05D005444 ORTHO05D006773 1.1e-38 163.7 124 66.9
Phvul.011G063700 Phaseolus vulgaris HOM05D005444 ORTHO05D006773 1.5e-38 163.3 150 54.7
Potri.009G032300 Populus trichocarpa HOM05D005444 ORTHO05D006773 1.5e-38 163.3 145 57.9
TPR.G34263 Trifolium pratense HOM05D005444 ORTHO05D006773 1.9e-38 162.9 145 56.6
QL01p031522 Quercus lobata HOM05D005444 ORTHO05D006773 3.3e-38 162.2 153 54.9
Sed0025445 Sechium edule HOM05D005444 ORTHO05D006773 7.3e-38 161.0 150 54.0
MD11G1099800 Malus domestica HOM05D005444 ORTHO05D006773 9.5e-38 160.6 164 56.1
TWI79G0937 Tripterygium wilfordii HOM05D005444 ORTHO05D006773 1.2e-37 160.2 155 57.4
COL.COLO4_18527 Corchorus olitorius HOM05D005444 ORTHO05D006773 2.8e-37 159.1 151 51.0
Glyma.13G336800 Glycine max HOM05D005444 ORTHO05D006773 3.6e-37 158.7 146 56.8
Glyma.15G037500 Glycine max HOM05D005444 ORTHO05D006773 4.7e-37 158.3 145 55.9
Ca_01319_v3 Cicer arietinum L. HOM05D005444 ORTHO05D006773 6.2e-37 157.9 146 55.5
arahy.Tifrunner.gnm1.ann1.XH3YCC Arachis hypogaea HOM05D005444 ORTHO05D006773 1.1e-36 157.1 150 56.0
arahy.Tifrunner.gnm1.ann1.3F7RX4 Arachis hypogaea HOM05D005444 ORTHO05D006773 4.0e-36 155.2 150 55.3
RcHm_v2.0_Chr5g0065341 Rosa chinensis HOM05D005444 ORTHO05D006773 4.0e-36 155.2 145 57.2
Zm00001eb355820 Zea mays HOM05D005444 ORTHO05D006773 4.0e-36 155.2 144 53.5
Cpa.g.sc81.131 Carica papaya HOM05D005444 ORTHO05D006773 6.8e-36 154.5 131 60.3
FAN16G3284 Fragaria x ananassa HOM05D005444 ORTHO05D006773 1.2e-35 153.7 153 55.6
FAN21G3395 Fragaria x ananassa HOM05D005444 ORTHO05D006773 1.5e-35 153.3 153 54.2
HanXRQChr06g0178811 Helianthus annuus HOM05D005444 ORTHO05D006773 1.5e-35 153.3 146 53.4
Lj1A150T42 Lonicera japonica HOM05D005444 ORTHO05D006773 1.5e-35 153.3 124 62.9
Lalb_Chr01g0003631 Lupinus albus HOM05D005444 ORTHO05D006773 1.5e-35 153.3 150 54.7
MD03G1090200 Malus domestica HOM05D005444 ORTHO05D006773 2.0e-35 152.9 149 53.0
FvH4_3g36480 Fragaria vesca HOM05D005444 ORTHO05D006773 4.4e-35 151.8 153 53.6
CsaV3_1G034350 Cucumis sativus L. HOM05D005444 ORTHO05D006773 9.9e-35 150.6 150 52.0
Sabra16G0145900 Salix brachista HOM05D005444 ORTHO05D006773 9.9e-35 150.6 124 62.9
VMungo1080G1107 Vigna mungo HOM05D000758 ORTHO05D002867 9.9e-35 150.6 146 55.5
CDE09G1090 Ceratophyllum demersum HOM05D005444 ORTHO05D006773 1.7e-34 149.8 144 57.6
Dinv17019 Davidia involucrata HOM05D005444 ORTHO05D006773 2.9e-34 149.1 92 77.2
Dinv42967 Davidia involucrata HOM05D005444 ORTHO05D006773 2.9e-34 149.1 92 77.2
Dinv43132 Davidia involucrata HOM05D005444 ORTHO05D006773 2.9e-34 149.1 92 77.2
DCAR_005353 Daucus carota HOM05D005444 ORTHO05D006773 3.7e-34 148.7 116 59.5
Phvul.L006243 Phaseolus vulgaris HOM05D005444 ORTHO05D006773 3.7e-34 148.7 146 54.1
THA.LOC104810774 Tarenaya hassleriana HOM05D005444 ORTHO05D006773 6.4e-34 147.9 153 49.0
arahy.Tifrunner.gnm1.ann1.T6ZDSA Arachis hypogaea HOM05D005444 ORTHO05D006773 1.1e-33 147.1 145 55.9
arahy.Tifrunner.gnm1.ann1.9NI65Y Arachis hypogaea HOM05D005444 ORTHO05D006773 1.9e-33 146.4 145 55.2
Lj3g0017515 Lotus japonicus HOM05D005444 ORTHO05D006773 1.9e-33 146.4 150 50.0
vmacro14541 Vaccinium macrocarpon HOM05D005444 ORTHO05D006773 1.9e-33 146.4 132 54.5
FAN11G0832 Fragaria x ananassa HOM05D005444 ORTHO05D006773 7.1e-33 144.4 162 51.2
Oeu017397.1 Olea europaea HOM05D005444 ORTHO05D006773 9.2e-33 144.1 123 57.7
MELO3C020623.2 Cucumis melo HOM05D005444 ORTHO05D006773 2.1e-32 142.9 133 57.1
SEGI_38540 Sequoiadendron giganteum HOM05D005444 ORTHO05D006773 2.7e-32 142.5 140 52.9
TPR.G1035 Trifolium pratense HOM05D005444 ORTHO05D006773 4.6e-32 141.7 154 50.0
EL10Ac7g16033 Beta vulgaris HOM05D005444 ORTHO05D006773 6.0e-32 141.4 123 58.5
A10p16600 Brassica napus HOM05D005444 ORTHO05D006773 2.3e-31 139.4 151 49.7
BraA10t43744Z Brassica rapa HOM05D005444 ORTHO05D006773 2.3e-31 139.4 151 49.7
Carub.0008s2007 Capsella rubella HOM05D005444 ORTHO05D006773 3.9e-31 138.7 152 48.0
BcaC04g19778 Brassica carinata HOM05D005444 ORTHO05D006773 6.6e-31 137.9 151 49.0
C09p51810 Brassica napus HOM05D005444 ORTHO05D006773 6.6e-31 137.9 151 49.0
BolC9t58042H Brassica oleracea HOM05D005444 ORTHO05D006773 6.6e-31 137.9 151 49.0
CDE04G2637 Ceratophyllum demersum HOM05D005444 ORTHO05D006773 6.6e-31 137.9 150 49.3
Oeu002422.1 Olea europaea HOM05D005444 ORTHO05D006773 1.1e-30 137.1 123 56.9
BcaB08g36261 Brassica carinata HOM05D005444 ORTHO05D006773 1.5e-30 136.7 150 47.3
CARHR285770 Cardamine hirsuta HOM05D005444 ORTHO05D006773 1.9e-30 136.3 153 47.7
AL8G35870 Arabidopsis lyrata HOM05D005444 ORTHO05D006773 3.3e-30 135.6 152 47.4
AT5G59400 Arabidopsis thaliana HOM05D005444 ORTHO05D006773 3.3e-30 135.6 152 47.4
ClCG03G001420 Citrullus lanatus HOM05D005444 ORTHO05D006773 3.3e-30 135.6 201 40.3
Aa31sc23G420 Aethionema arabicum HOM05D005444 ORTHO05D006773 9.6e-30 134.0 147 47.6
Sp6g21080 Schrenkiella parvula HOM05D005444 ORTHO05D006773 1.6e-29 133.3 153 47.1
Nn2g13370 Nelumbo nucifera HOM05D005444 ORTHO05D006773 6.2e-29 131.3 89 68.5
Psat5g286680 Pisum sativum HOM05D005444 ORTHO05D006773 2.4e-28 129.4 104 60.6
HPP92_009462 Vanilla planifolia HOM05D005444 ORTHO05D006773 4.0e-28 128.6 142 47.9
FAN25G3546 Fragaria x ananassa HOM05D005444 ORTHO05D006773 1.2e-24 117.1 111 55.0
Mapoly0050s0097 Marchantia polymorpha HOM05D005444 ORTHO05D006773 1.7e-23 113.2 145 40.7
unitig_747.g22037 Utricularia gibba HOM05D005444 ORTHO05D006773 1.9e-22 109.8 115 53.0
Thecc.09G320000 Theobroma cacao HOM05D005444 ORTHO05D006773 8.1e-21 104.4 154 42.2
CiPaw.13G092700 Carya illinoinensis HOM05D005444 ORTHO05D006773 1.8e-20 103.2 92 60.9
Ca_19148_v3 Cicer arietinum L. HOM05D005444 ORTHO05D006773 6.9e-20 101.3 89 59.6
Hund18899 Selenicereus undatus HOM05D005444 ORTHO05D006773 1.7e-18 96.7 93 53.8
AagrBONN_evm.TU.Sc2ySwM_368.577 Anthoceros agrestis HOM05D005444 ORTHO05D006773 4.9e-18 95.1 140 38.6
Prupe.6G074400 Prunus persica HOM05D005444 ORTHO05D006773 1.1e-17 94.0 91 59.3
Duzib168G1171 Durio zibethinus HOM05D005444 ORTHO05D006773 1.9e-17 93.2 142 39.4
Pp3c14_5400 Physcomitrium patens HOM05D005444 ORTHO05D006773 4.6e-16 88.6 100 43.0
TAR636G2897 Trochodendron aralioides HOM05D005444 ORTHO05D006773 7.9e-16 87.8 66 72.7
Pp3c1_24530 Physcomitrium patens HOM05D005444 ORTHO05D006773 1.3e-15 87.0 94 46.8
TPR.G27554 Trifolium pratense HOM05D005444 ORTHO05D006773 6.6e-15 84.7 74 55.4
Medtr4g064030 Medicago truncatula HOM05D005444 ORTHO05D006773 1.1e-12 77.4 125 41.6
Thhalv10014435m.g Eutrema salsugineum HOM05D005444 ORTHO05D006773 2.4e-12 76.3 98 46.9
TPR.G27777 Trifolium pratense HOM05D005444 ORTHO05D006773 2.0e-11 73.2 61 54.1
Duzib170G0057 Durio zibethinus HOM05D005444 ORTHO05D006773 8.7e-07 57.8 72 43.1
MCO07G449 Micromonas commoda HOM05D005444 ORTHO05D006773 1.9e-06 56.6 86 37.2
COL.COLO4_35627 Corchorus olitorius HOM05D005444 ORTHO05D001950 5.6e-06 55.1 70 45.7


User provided reference genes

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