Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G00923 Aquilegia oxysepala HOM05D004332 ORTHO05D005116 1.0e-61 240.0 129 100.0
GSVIVG01024938001 Vitis vinifera HOM05D004332 ORTHO05D005116 1.4e-50 203.0 128 78.1
TAR633G2148 Trochodendron aralioides HOM05D004332 ORTHO05D005116 5.3e-50 201.1 128 78.9
ATR0559G209 Amborella trichopoda HOM05D004332 ORTHO05D005116 7.7e-49 197.2 129 77.5
Carub.0008s2008 Capsella rubella HOM05D004332 ORTHO05D005116 7.7e-49 197.2 128 76.6
MBI05_g28381_MAGBIO Magnolia biondii HOM05D004332 ORTHO05D005116 7.7e-49 197.2 129 73.6
CARHR285780 Cardamine hirsuta HOM05D004332 ORTHO05D005116 2.9e-48 195.3 128 74.2
Ciclev10029562m.g Citrus clementina HOM05D004332 ORTHO05D005116 2.9e-48 195.3 127 76.4
MD03G1090100 Malus domestica HOM05D004332 ORTHO05D005116 2.9e-48 195.3 128 72.7
Dinv04179 Davidia involucrata HOM05D004332 ORTHO05D005116 5.0e-48 194.5 128 75.8
Nn2g11136 Nelumbo nucifera HOM05D004332 ORTHO05D005116 6.5e-48 194.1 112 82.1
Thhalv10015001m.g Eutrema salsugineum HOM05D004332 ORTHO05D005116 1.1e-47 193.4 128 75.0
Oeu017398.1 Olea europaea HOM05D004332 ORTHO05D005116 1.1e-47 193.4 128 72.7
AL8G35880 Arabidopsis lyrata HOM05D004332 ORTHO05D005116 1.5e-47 193.0 128 77.3
CiPaw.13G092600 Carya illinoinensis HOM05D004332 ORTHO05D005116 1.5e-47 193.0 112 79.5
Rhsim01G0229500 Rhododendron simsii HOM05D004332 ORTHO05D005116 1.9e-47 192.6 129 72.9
Dinv17021 Davidia involucrata HOM05D004332 ORTHO05D005116 2.5e-47 192.2 127 74.8
Dinv42969 Davidia involucrata HOM05D004332 ORTHO05D005116 2.5e-47 192.2 127 74.8
Dinv43130 Davidia involucrata HOM05D004332 ORTHO05D005116 2.5e-47 192.2 127 74.8
Eucgr.J02045 Eucalyptus grandis HOM05D004332 ORTHO05D005116 2.5e-47 192.2 129 74.4
SEGI_11468 Sequoiadendron giganteum HOM05D004332 ORTHO05D005116 2.5e-47 192.2 129 72.9
TWI31G0816 Tripterygium wilfordii HOM05D004332 ORTHO05D005116 2.5e-47 192.2 128 75.0
CSS0027892 Camellia sinensis var. sinensis HOM05D004332 ORTHO05D005116 3.2e-47 191.8 129 77.5
Prupe.6G074300 Prunus persica HOM05D004332 ORTHO05D005116 3.2e-47 191.8 129 72.9
Aa31sc23G410 Aethionema arabicum HOM05D004332 ORTHO05D005116 4.2e-47 191.4 128 75.0
MD11G1099700 Malus domestica HOM05D004332 ORTHO05D005116 4.2e-47 191.4 130 73.8
PSO151G0214 Papaver somniferum HOM05D004332 ORTHO05D005116 4.2e-47 191.4 108 81.5
PSO339G1935 Papaver somniferum HOM05D004332 ORTHO05D005116 4.2e-47 191.4 108 81.5
Cc01_g13020 Coffea canephora HOM05D004332 ORTHO05D005116 7.2e-47 190.7 129 72.9
FAN25G2250 Fragaria x ananassa HOM05D004332 ORTHO05D005116 9.4e-47 190.3 130 72.3
SalBow2G0012 Salvia bowleyana HOM05D004332 ORTHO05D005116 9.4e-47 190.3 126 71.4
Thecc.09G319900 Theobroma cacao HOM05D004332 ORTHO05D005116 9.4e-47 190.3 128 72.7
CiPaw.14G067900 Carya illinoinensis HOM05D004332 ORTHO05D005116 1.2e-46 189.9 112 76.8
Duzib150G0187 Durio zibethinus HOM05D004332 ORTHO05D005116 1.2e-46 189.9 128 71.9
AT5G59410 Arabidopsis thaliana HOM05D004332 ORTHO05D005116 1.6e-46 189.5 128 76.6
Gohir.A05G094800 Gossypium hirsutum HOM05D004332 ORTHO05D005116 1.6e-46 189.5 128 71.9
Gohir.D05G095080 Gossypium hirsutum HOM05D004332 ORTHO05D005116 1.6e-46 189.5 128 71.9
Hund04945 Selenicereus undatus HOM05D004332 ORTHO05D005116 1.6e-46 189.5 112 79.5
SGA_v2.0_scaffold132G34538 Striga asiatica HOM05D004332 ORTHO05D005116 1.6e-46 189.5 128 73.4
FvH4_3g36490 Fragaria vesca HOM05D004332 ORTHO05D005116 2.1e-46 189.1 130 71.5
FAN11G3576 Fragaria x ananassa HOM05D004332 ORTHO05D005116 2.1e-46 189.1 130 71.5
CANSAT54G0234 Cannabis sativa HOM05D004332 ORTHO05D005116 2.7e-46 188.7 128 73.4
COL.COLO4_18528 Corchorus olitorius HOM05D004332 ORTHO05D005116 3.6e-46 188.3 128 71.9
FAN16G1081 Fragaria x ananassa HOM05D004332 ORTHO05D005116 3.6e-46 188.3 130 70.8
Gohir.D05G095200 Gossypium hirsutum HOM05D004332 ORTHO05D005116 3.6e-46 188.3 128 71.1
HanXRQChr08g0237001 Helianthus annuus HOM05D004332 ORTHO05D005116 3.6e-46 188.3 129 72.1
TWI75G0441 Tripterygium wilfordii HOM05D004332 ORTHO05D005116 3.6e-46 188.3 129 71.3
CSS0035025 Camellia sinensis var. sinensis HOM05D004332 ORTHO05D005116 4.7e-46 188.0 128 71.9
Sp6g21090 Schrenkiella parvula HOM05D004332 ORTHO05D005116 4.7e-46 188.0 128 74.2
Rhsim13G0081500 Rhododendron simsii HOM05D004332 ORTHO05D005116 6.1e-46 187.6 129 69.8
Duzib168G2052 Durio zibethinus HOM05D004332 ORTHO05D005116 8.0e-46 187.2 129 70.5
Gohir.A03G043200 Gossypium hirsutum HOM05D004332 ORTHO05D005116 8.0e-46 187.2 128 71.1
Manes.01G172400 Manihot esculenta HOM05D004332 ORTHO05D005116 1.0e-45 186.8 128 71.1
Gohir.D03G124100 Gossypium hirsutum HOM05D004332 ORTHO05D005116 1.4e-45 186.4 128 69.5
arahy.Tifrunner.gnm1.ann1.KAW7XL Arachis hypogaea HOM05D004332 ORTHO05D005116 1.8e-45 186.0 128 71.1
Glyma.11G138900 Glycine max HOM05D004332 ORTHO05D005116 1.8e-45 186.0 128 71.1
Manes.02G131400 Manihot esculenta HOM05D004332 ORTHO05D005116 1.8e-45 186.0 128 72.7
QL01p031517 Quercus lobata HOM05D004332 ORTHO05D005116 1.8e-45 186.0 127 70.1
Gohir.A07G099000 Gossypium hirsutum HOM05D004332 ORTHO05D005116 2.3e-45 185.7 129 70.5
Lsat_1_v5_gn_9_23661 Lactuca sativa HOM05D004332 ORTHO05D005116 2.3e-45 185.7 129 69.0
Actinidia34413 Actinidia chinensis HOM05D004332 ORTHO05D005116 3.0e-45 185.3 128 71.9
Gorai.009G098500 Gossypium raimondii HOM05D004332 ORTHO05D005116 3.0e-45 185.3 128 71.1
RcHm_v2.0_Chr5g0065351 Rosa chinensis HOM05D004332 ORTHO05D005116 3.0e-45 185.3 129 69.0
Lalb_Chr03g0026581 Lupinus albus HOM05D004332 ORTHO05D005116 4.0e-45 184.9 128 70.3
Phvul.011G063600 Phaseolus vulgaris HOM05D004332 ORTHO05D005116 4.0e-45 184.9 112 76.8
VMungo1127G1024 Vigna mungo HOM05D004332 ORTHO05D005116 4.0e-45 184.9 112 76.8
Migut.N00901 Erythranthe guttata HOM05D004332 ORTHO05D005116 5.2e-45 184.5 128 71.9
Sc12g0001450 Simmondsia chinensis HOM05D004332 ORTHO05D005116 5.2e-45 184.5 112 75.9
Actinidia37195 Actinidia chinensis HOM05D004332 ORTHO05D005116 6.7e-45 184.1 128 71.1
AT2G29020 Arabidopsis thaliana HOM05D004332 ORTHO05D005116 6.7e-45 184.1 124 72.6
AUR62009559 Chenopodium quinoa HOM05D004332 ORTHO05D005116 6.7e-45 184.1 126 69.0
ECA247G3838 Erigeron canadensis HOM05D004332 ORTHO05D005116 6.7e-45 184.1 130 72.3
Gohir.D07G103500 Gossypium hirsutum HOM05D004332 ORTHO05D005116 6.7e-45 184.1 127 70.9
TPR.G34281 Trifolium pratense HOM05D004332 ORTHO05D005116 6.7e-45 184.1 129 71.3
CARHR122250 Cardamine hirsuta HOM05D004332 ORTHO05D005116 8.8e-45 183.7 129 71.3
Psat5g286720 Pisum sativum HOM05D004332 ORTHO05D005116 8.8e-45 183.7 112 75.9
Glyma.12G062500 Glycine max HOM05D004332 ORTHO05D005116 1.2e-44 183.3 128 69.5
Medtr2g097270 Medicago truncatula HOM05D004332 ORTHO05D005116 1.2e-44 183.3 129 70.5
AUR62001771 Chenopodium quinoa HOM05D004332 ORTHO05D005116 1.5e-44 183.0 108 78.7
Lalb_Chr19g0137881 Lupinus albus HOM05D004332 ORTHO05D005116 1.5e-44 183.0 128 68.8
Potri.009G032100 Populus trichocarpa HOM05D004332 ORTHO05D005116 1.5e-44 183.0 112 76.8
THA.LOC104814879 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 1.5e-44 183.0 129 70.5
CsaV3_6G016760 Cucumis sativus L. HOM05D004332 ORTHO05D005116 2.0e-44 182.6 112 75.0
AL146U10030 Arabidopsis lyrata HOM05D004332 ORTHO05D005116 2.6e-44 182.2 129 70.5
CDE04G0625 Ceratophyllum demersum HOM05D004332 ORTHO05D005116 2.6e-44 182.2 112 74.1
MELO3C025906.2 Cucumis melo HOM05D004332 ORTHO05D005116 2.6e-44 182.2 112 75.0
Lj3g0024178 Lotus japonicus HOM05D004332 ORTHO05D005116 2.6e-44 182.2 129 69.8
Gorai.003G130800 Gossypium raimondii HOM05D004332 ORTHO05D005116 3.3e-44 181.8 129 69.0
ClCG02G020050 Citrullus lanatus HOM05D004332 ORTHO05D005116 4.4e-44 181.4 112 75.0
Oeu002423.1 Olea europaea HOM05D004332 ORTHO05D005116 4.4e-44 181.4 128 68.0
Potri.001G241500 Populus trichocarpa HOM05D004332 ORTHO05D005116 4.4e-44 181.4 127 72.4
Sed0019241 Sechium edule HOM05D004332 ORTHO05D005116 4.4e-44 181.4 128 68.8
Sc21g0005870 Simmondsia chinensis HOM05D004332 ORTHO05D005116 5.7e-44 181.0 128 70.3
unitig_6.g29275 Utricularia gibba HOM05D004332 ORTHO05D005116 5.7e-44 181.0 128 68.8
unitig_747.g21434 Utricularia gibba HOM05D004332 ORTHO05D005116 5.7e-44 181.0 128 68.8
Thhalv10017410m.g Eutrema salsugineum HOM05D004332 ORTHO05D005116 9.7e-44 180.3 129 70.5
Sed0013921 Sechium edule HOM05D004332 ORTHO05D005116 9.7e-44 180.3 112 75.0
THA.LOC104810775 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 9.7e-44 180.3 129 70.5
Ah.08g219640 Amaranthus hybridus HOM05D004332 ORTHO05D005116 2.2e-43 179.1 112 73.2
Hma1.2p1_0615F.1_g189860 Hydrangea macrophylla HOM05D004332 ORTHO05D005116 2.8e-43 178.7 112 75.9
ClCG03G001410 Citrullus lanatus HOM05D004332 ORTHO05D005116 3.7e-43 178.3 128 68.0
CsaV3_1G034360 Cucumis sativus L. HOM05D004332 ORTHO05D005116 3.7e-43 178.3 128 66.4
BcaB02g10224 Brassica carinata HOM05D004332 ORTHO05D005116 6.3e-43 177.6 130 70.8
Oeu064111.2 Olea europaea HOM05D004332 ORTHO05D005116 6.3e-43 177.6 129 65.9
BraA04t17767Z Brassica rapa HOM05D004332 ORTHO05D005116 8.2e-43 177.2 129 69.0
CDE07G0755 Ceratophyllum demersum HOM05D004332 ORTHO05D005116 8.2e-43 177.2 127 65.4
MELO3C020622.2 Cucumis melo HOM05D004332 ORTHO05D005116 8.2e-43 177.2 112 72.3
A04p21990 Brassica napus HOM05D004332 ORTHO05D005116 1.1e-42 176.8 129 68.2
Carub.0004s1001 Capsella rubella HOM05D004332 ORTHO05D005116 1.1e-42 176.8 129 69.0
PGR102G2585 Punica granatum HOM05D004332 ORTHO05D005116 1.1e-42 176.8 114 77.2
THA.LOC104826319 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 1.1e-42 176.8 129 71.3
A07p19440 Brassica napus HOM05D004332 ORTHO05D005116 1.4e-42 176.4 130 67.7
BolC4t27343H Brassica oleracea HOM05D004332 ORTHO05D005116 1.4e-42 176.4 129 67.4
Sp4g11830 Schrenkiella parvula HOM05D004332 ORTHO05D005116 1.4e-42 176.4 129 68.2
Sed0025770 Sechium edule HOM05D004332 ORTHO05D005116 1.4e-42 176.4 128 68.0
EL10Ac7g16034 Beta vulgaris HOM05D004332 ORTHO05D005116 1.8e-42 176.0 126 65.9
BcaC02g11036 Brassica carinata HOM05D004332 ORTHO05D005116 1.8e-42 176.0 130 67.7
C04p21940 Brassica napus HOM05D004332 ORTHO05D005116 1.8e-42 176.0 130 67.7
BolC4t23714H Brassica oleracea HOM05D004332 ORTHO05D005116 1.8e-42 176.0 130 67.7
BcaB06g28270 Brassica carinata HOM05D004332 ORTHO05D005116 2.4e-42 175.6 129 68.2
BcaC02g08120 Brassica carinata HOM05D004332 ORTHO05D005116 2.4e-42 175.6 129 67.4
C04p58150 Brassica napus HOM05D004332 ORTHO05D005116 2.4e-42 175.6 129 67.4
BraA07t29650Z Brassica rapa HOM05D004332 ORTHO05D005116 2.4e-42 175.6 130 66.9
Aa31LG5G7210 Aethionema arabicum HOM05D004332 ORTHO05D005116 4.1e-42 174.9 112 73.2
Mapoly0045s0062 Marchantia polymorpha HOM05D004332 ORTHO05D005116 4.1e-42 174.9 110 70.0
TAR636G3330 Trochodendron aralioides HOM05D004332 ORTHO05D005116 4.1e-42 174.9 101 82.2
DCAR_018915 Daucus carota HOM05D004332 ORTHO05D005116 5.3e-42 174.5 97 81.4
THA.LOC104800671 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 9.1e-42 173.7 128 66.4
Gorai.001G111400 Gossypium raimondii HOM05D004332 ORTHO05D005116 1.2e-41 173.3 120 70.0
Lsat_1_v5_gn_8_73521 Lactuca sativa HOM05D004332 ORTHO05D005116 1.6e-41 172.9 101 79.2
Sabra16G0146000 Salix brachista HOM05D004332 ORTHO05D005116 3.5e-41 171.8 126 67.5
vmacro14542 Vaccinium macrocarpon HOM05D004332 ORTHO05D005116 7.7e-41 170.6 117 70.1
Atru.chr3.3947 Acer truncatum HOM05D004332 ORTHO05D005116 1.7e-40 169.5 120 70.8
CAN.G394.64 Capsicum annuum HOM05D004332 ORTHO05D005116 3.8e-40 168.3 129 62.8
SMO304G0081 Selaginella moellendorffii HOM05D004332 ORTHO05D005116 5.0e-40 167.9 103 71.8
Nitab4.5_0000463g0140 Nicotiana tabacum HOM05D004332 ORTHO05D005116 1.1e-39 166.8 128 66.4
Nitab4.5_0001326g0120 Nicotiana tabacum HOM05D004332 ORTHO05D005116 1.5e-39 166.4 128 66.4
Solyc06g076260.3 Solanum lycopersicum HOM05D004332 ORTHO05D005116 1.5e-39 166.4 121 66.9
Sabra09G0022800 Salix brachista HOM05D004332 ORTHO05D005116 1.9e-39 166.0 103 74.8
PGSC0003DMG400030417 Solanum tuberosum HOM05D004332 ORTHO05D005116 2.5e-39 165.6 125 65.6
arahy.Tifrunner.gnm1.ann1.WMUR0J Arachis hypogaea HOM05D004332 ORTHO05D005116 3.2e-39 165.2 115 68.7
Os05g0110600 Oryza sativa ssp. japonica HOM05D004332 ORTHO05D005116 1.2e-38 163.3 121 63.6
arahy.Tifrunner.gnm1.ann1.TT4C38 Arachis hypogaea HOM05D004332 ORTHO05D005116 2.1e-38 162.5 125 65.6
arahy.Tifrunner.gnm1.ann1.A22IES Arachis hypogaea HOM05D004332 ORTHO05D005116 8.0e-38 160.6 126 64.3
Nn2g13368 Nelumbo nucifera HOM05D004332 ORTHO05D005116 1.8e-37 159.5 91 83.5
Zm00001eb266910 Zea mays HOM05D004332 ORTHO05D005116 4.0e-37 158.3 124 61.3
Pp3c16_16760 Physcomitrium patens HOM05D004332 ORTHO05D005116 6.8e-37 157.5 110 68.2
HanXRQChr07g0197291 Helianthus annuus HOM05D004332 ORTHO05D005116 3.7e-35 151.8 137 59.1
AagrBONN_evm.TU.Sc2ySwM_228.3328 Anthoceros agrestis HOM05D004332 ORTHO05D005116 1.4e-34 149.8 128 60.2
Pp3c6_17300 Physcomitrium patens HOM05D004332 ORTHO05D005116 2.3e-32 142.5 110 58.2
Actinidia07026 Actinidia chinensis HOM05D004332 ORTHO05D005116 4.1e-26 121.7 85 71.8
Sopen06g032690 Solanum pennellii HOM05D004332 ORTHO05D005116 1.2e-25 120.2 78 71.8
SEGI_12680 Sequoiadendron giganteum HOM05D004332 ORTHO05D005116 1.4e-21 106.7 76 67.1
TAR369G0503 Trochodendron aralioides HOM05D004332 ORTHO05D005116 4.4e-20 101.7 57 78.9
FAN21G1178 Fragaria x ananassa HOM05D004332 ORTHO05D005116 1.7e-19 99.8 74 64.9
Haze_24115 Corylus avellana HOM05D004332 ORTHO05D005116 2.9e-19 99.0 74 64.9
AL4G23580 Arabidopsis lyrata HOM05D004332 ORTHO05D005116 3.2e-18 95.5 73 63.0
vmacro03061 Vaccinium macrocarpon HOM05D004332 ORTHO05D005116 5.4e-18 94.7 72 65.3
Peaxi162Scf00774g00129 Petunia axillaris HOM05D004332 ORTHO05D005116 1.2e-17 93.6 56 80.4
Actinidia23932 Actinidia chinensis HOM05D004332 ORTHO05D005116 1.6e-17 93.2 60 75.0
SHI47893 Sapria himalayana HOM05D004332 ORTHO05D005116 6.2e-14 81.3 50 74.0
HPP92_028206 Vanilla planifolia HOM05D004332 ORTHO05D005116 1.1e-10 70.5 61 59.0
Cre08.g376000 Chlamydomonas reinhardtii HOM05D004332 ORTHO05D005116 2.0e-09 66.2 95 33.7
Eucgr.H02119 Eucalyptus grandis HOM05D004332 ORTHO05D005116 6.6e-08 61.2 58 58.6


User provided reference genes

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