Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G00845 Aquilegia oxysepala HOM05D004449 ORTHO05D005473 6.0e-183 644.0 325 100.0
PSO384G3644 Papaver somniferum HOM05D004449 ORTHO05D005473 4.7e-135 485.0 313 77.6
PSO339G4690 Papaver somniferum HOM05D004449 ORTHO05D005473 1.5e-133 479.9 313 76.7
Nn6g34893 Nelumbo nucifera HOM05D004449 ORTHO05D005473 5.5e-128 461.5 300 77.3
QL07p038716 Quercus lobata HOM05D004449 ORTHO05D005473 1.2e-127 460.3 305 76.4
QL07p038966 Quercus lobata HOM05D004449 ORTHO05D005473 1.2e-127 460.3 305 76.4
TAR623G0834 Trochodendron aralioides HOM05D004449 ORTHO05D005473 1.2e-127 460.3 305 76.7
Actinidia05427 Actinidia chinensis HOM05D004449 ORTHO05D005473 1.8e-126 456.4 305 77.0
MBI17_g08343_MAGBIO Magnolia biondii HOM05D004449 ORTHO05D005473 5.2e-126 454.9 325 72.6
Cfa016611 Carpinus fangiana HOM05D004449 ORTHO05D005473 2.0e-125 453.0 306 75.2
Ciclev10012240m.g Citrus clementina HOM05D004449 ORTHO05D005473 3.3e-125 452.2 270 82.2
ClCG08G005200 Citrullus lanatus HOM05D004449 ORTHO05D005473 2.2e-124 449.5 314 73.6
Lalb_Chr06g0172241 Lupinus albus HOM05D004449 ORTHO05D005473 4.8e-124 448.4 286 79.0
CANSAT64G1281 Cannabis sativa HOM05D004449 ORTHO05D005473 8.2e-124 447.6 294 76.2
TWI74G1045 Tripterygium wilfordii HOM05D004449 ORTHO05D005473 1.1e-123 447.2 306 75.2
Glyma.13G153700 Glycine max HOM05D004449 ORTHO05D005473 1.8e-123 446.4 288 78.1
GSVIVG01033847001 Vitis vinifera HOM05D004449 ORTHO05D005473 2.4e-123 446.0 319 73.7
Lj1g0018712 Lotus japonicus HOM05D004449 ORTHO05D005473 3.1e-123 445.7 270 83.0
Sc02g0000280 Simmondsia chinensis HOM05D004449 ORTHO05D005473 1.2e-122 443.7 282 79.4
Ca_00406_v3 Cicer arietinum L. HOM05D004449 ORTHO05D005473 2.7e-122 442.6 280 80.0
Haze_19615 Corylus avellana HOM05D004449 ORTHO05D005473 4.5e-122 441.8 305 73.4
CAN.G694.90 Capsicum annuum HOM05D004449 ORTHO05D005473 5.9e-122 441.4 315 71.7
Glyma.02G054800 Glycine max HOM05D004449 ORTHO05D005473 7.7e-122 441.0 310 75.2
VMungo1309G2207 Vigna mungo HOM05D004449 ORTHO05D005473 1.3e-121 440.3 269 82.2
MELO3C022184.2 Cucumis melo HOM05D004449 ORTHO05D005473 2.2e-121 439.5 311 71.7
Phvul.009G260700 Phaseolus vulgaris HOM05D004449 ORTHO05D005473 2.2e-121 439.5 273 80.2
TPR.G11735 Trifolium pratense HOM05D004449 ORTHO05D005473 3.8e-121 438.7 279 79.2
vmacro21413 Vaccinium macrocarpon HOM05D004449 ORTHO05D005473 5.0e-121 438.3 305 71.1
CiPaw.10G010000 Carya illinoinensis HOM05D004449 ORTHO05D005473 8.5e-121 437.6 307 73.6
Sopen05g034560 Solanum pennellii HOM05D004449 ORTHO05D005473 8.5e-121 437.6 311 71.7
MD12G1036500 Malus domestica HOM05D004449 ORTHO05D005473 1.1e-120 437.2 316 71.2
Hma1.2p1_0084F.1_g043840 Hydrangea macrophylla HOM05D004449 ORTHO05D005473 2.5e-120 436.0 334 70.1
Solyc05g056150.4 Solanum lycopersicum HOM05D004449 ORTHO05D005473 2.5e-120 436.0 311 71.7
Medtr2g015010 Medicago truncatula HOM05D004449 ORTHO05D005473 4.2e-120 435.3 269 80.3
CSS0045328 Camellia sinensis var. sinensis HOM05D004449 ORTHO05D005473 5.5e-120 434.9 267 79.8
Hma1.2p1_0820F.1_g223850 Hydrangea macrophylla HOM05D004449 ORTHO05D005473 7.2e-120 434.5 342 68.4
Lsat_1_v5_gn_8_77140 Lactuca sativa HOM05D004449 ORTHO05D005473 9.4e-120 434.1 301 72.8
PGSC0003DMG400023338 Solanum tuberosum HOM05D004449 ORTHO05D005473 9.4e-120 434.1 270 78.5
Manes.08G025500 Manihot esculenta HOM05D004449 ORTHO05D005473 1.6e-119 433.3 306 72.5
RcHm_v2.0_Chr3g0473801 Rosa chinensis HOM05D004449 ORTHO05D005473 2.1e-119 433.0 270 78.5
MD14G1023300 Malus domestica HOM05D004449 ORTHO05D005473 3.6e-119 432.2 309 71.8
PGR042G0526 Punica granatum HOM05D004449 ORTHO05D005473 6.1e-119 431.4 310 71.6
Eucgr.A02663 Eucalyptus grandis HOM05D004449 ORTHO05D005473 1.0e-118 430.6 278 77.3
Potri.004G090500 Populus trichocarpa HOM05D004449 ORTHO05D005473 1.4e-118 430.3 287 76.3
FvH4_6g18790 Fragaria vesca HOM05D004449 ORTHO05D005473 4.0e-118 428.7 270 78.5
Potri.017G124800 Populus trichocarpa HOM05D004449 ORTHO05D005473 4.0e-118 428.7 288 76.4
Peaxi162Scf00858g00311 Petunia axillaris HOM05D004449 ORTHO05D005473 1.2e-117 427.2 309 70.9
Thhalv10016966m.g Eutrema salsugineum HOM05D004449 ORTHO05D005473 2.0e-117 426.4 297 72.4
MSTRG.19262 Avicennia marina HOM05D004449 ORTHO05D005473 4.4e-117 425.2 270 76.3
Gohir.D04G099600 Gossypium hirsutum HOM05D004449 ORTHO05D005473 4.4e-117 425.2 302 71.9
Sed0019477 Sechium edule HOM05D004449 ORTHO05D005473 4.4e-117 425.2 300 73.0
Gorai.009G402500 Gossypium raimondii HOM05D004449 ORTHO05D005473 5.7e-117 424.9 302 71.5
vmacro04352 Vaccinium macrocarpon HOM05D004449 ORTHO05D005473 9.8e-117 424.1 339 65.8
ECA248G0038 Erigeron canadensis HOM05D004449 ORTHO05D005473 1.3e-116 423.7 280 75.7
Nitab4.5_0006507g0050 Nicotiana tabacum HOM05D004449 ORTHO05D005473 1.7e-116 423.3 264 78.4
RhsimUnG0066300 Rhododendron simsii HOM05D004449 ORTHO05D005473 2.2e-116 422.9 313 69.6
SalBow3G1569 Salvia bowleyana HOM05D004449 ORTHO05D005473 2.8e-116 422.5 286 72.7
Aa31LG5G21350 Aethionema arabicum HOM05D004449 ORTHO05D005473 4.8e-116 421.8 265 78.1
EL10Ac8g19596 Beta vulgaris HOM05D004449 ORTHO05D005473 1.1e-115 420.6 267 78.3
Gohir.A04G062600 Gossypium hirsutum HOM05D004449 ORTHO05D005473 1.1e-115 420.6 302 70.9
Nitab4.5_0004212g0050 Nicotiana tabacum HOM05D004449 ORTHO05D005473 1.1e-115 420.6 317 68.5
Cc06_g05800 Coffea canephora HOM05D004449 ORTHO05D005473 1.4e-115 420.2 308 70.1
AL4G32330 Arabidopsis lyrata HOM05D004449 ORTHO05D005473 1.8e-115 419.9 271 77.9
ATR1125G096 Amborella trichopoda HOM05D004449 ORTHO05D005473 2.4e-115 419.5 298 71.8
AT2G36230 Arabidopsis thaliana HOM05D004449 ORTHO05D005473 2.4e-115 419.5 273 76.9
Sp4g18450 Schrenkiella parvula HOM05D004449 ORTHO05D005473 2.4e-115 419.5 265 78.5
Carub.0004s1799 Capsella rubella HOM05D004449 ORTHO05D005473 4.1e-115 418.7 271 77.9
SalBow4G0277 Salvia bowleyana HOM05D004449 ORTHO05D005473 4.1e-115 418.7 270 75.6
BcaB01g03853 Brassica carinata HOM05D004449 ORTHO05D005473 5.4e-115 418.3 265 77.7
FAN02G4498 Fragaria x ananassa HOM05D004449 ORTHO05D005473 5.4e-115 418.3 277 75.8
BraA03t11251Z Brassica rapa HOM05D004449 ORTHO05D005473 7.0e-115 417.9 266 78.6
Nitab4.5_0000582g0210 Nicotiana tabacum HOM05D004449 ORTHO05D005473 9.1e-115 417.5 317 69.1
BraA05t19914Z Brassica rapa HOM05D004449 ORTHO05D005473 1.2e-114 417.2 274 75.9
THA.LOC104804908 Tarenaya hassleriana HOM05D004449 ORTHO05D005473 1.2e-114 417.2 301 72.4
BcaB02g09374 Brassica carinata HOM05D004449 ORTHO05D005473 1.6e-114 416.8 265 77.7
CARHR130470 Cardamine hirsuta HOM05D004449 ORTHO05D005473 5.9e-114 414.8 273 77.3
A03p20000 Brassica napus HOM05D004449 ORTHO05D005473 1.0e-113 414.1 266 78.2
CDE07G1047 Ceratophyllum demersum HOM05D004449 ORTHO05D005473 1.3e-113 413.7 292 71.9
C03p23440 Brassica napus HOM05D004449 ORTHO05D005473 1.7e-113 413.3 259 79.5
BolC3t14740H Brassica oleracea HOM05D004449 ORTHO05D005473 1.7e-113 413.3 259 79.5
A05p09610 Brassica napus HOM05D004449 ORTHO05D005473 2.9e-113 412.5 264 77.3
HanXRQChr03g0063591 Helianthus annuus HOM05D004449 ORTHO05D005473 3.8e-113 412.1 302 70.2
FAN14G0980 Fragaria x ananassa HOM05D004449 ORTHO05D005473 6.5e-113 411.4 304 69.7
FAN05G3501 Fragaria x ananassa HOM05D004449 ORTHO05D005473 5.5e-112 408.3 304 69.1
FAN05G3651 Fragaria x ananassa HOM05D004449 ORTHO05D005473 7.2e-112 407.9 304 69.4
BolC4t22839H Brassica oleracea HOM05D004449 ORTHO05D005473 1.2e-111 407.1 275 74.5
Lj2A137G26 Lonicera japonica HOM05D004449 ORTHO05D005473 3.6e-111 405.6 253 79.4
Zm00001eb287580 Zea mays HOM05D004449 ORTHO05D005473 3.0e-110 402.5 278 71.6
Migut.J01033 Erythranthe guttata HOM05D004449 ORTHO05D005473 5.2e-110 401.7 264 75.0
Zm00001eb020250 Zea mays HOM05D004449 ORTHO05D005473 5.2e-110 401.7 278 71.2
Duzib093G2067 Durio zibethinus HOM05D004449 ORTHO05D005473 9.2e-107 391.0 308 66.9
Atru.chr12.1330 Acer truncatum HOM05D004449 ORTHO05D005473 3.5e-106 389.0 280 70.7
Ah.04g162190 Amaranthus hybridus HOM05D005123 ORTHO05D006532 6.6e-105 384.8 254 77.2
HPP92_001188 Vanilla planifolia HOM05D004449 ORTHO05D005473 3.3e-104 382.5 305 64.6
SHI27835 Sapria himalayana HOM05D004449 ORTHO05D005473 4.7e-103 378.6 267 68.9
C04p11920 Brassica napus HOM05D004449 ORTHO05D005473 1.0e-102 377.5 246 76.8
DCAR_006449 Daucus carota HOM05D004449 ORTHO05D005473 1.4e-102 377.1 232 78.4
BcaC02g11725 Brassica carinata HOM05D004449 ORTHO05D005473 1.8e-102 376.7 258 74.4
Nitab4.5_0000071g0140 Nicotiana tabacum HOM05D004449 ORTHO05D005473 4.0e-102 375.6 292 66.4
Pp3c12_22840 Physcomitrium patens HOM05D004449 ORTHO05D005473 4.0e-102 375.6 263 70.0
Rhsim07G0247400 Rhododendron simsii HOM05D004449 ORTHO05D005473 4.0e-102 375.6 373 56.3
AagrBONN_evm.TU.Sc2ySwM_344.169 Anthoceros agrestis HOM05D004449 ORTHO05D005473 1.5e-101 373.6 274 68.6
AUR62036483 Chenopodium quinoa HOM05D004449 ORTHO05D005473 2.2e-100 369.8 234 78.6
BcaC02g11727 Brassica carinata HOM05D004449 ORTHO05D005473 1.6e-98 363.6 254 72.4
Cre12.g495300 Chlamydomonas reinhardtii HOM05D004449 ORTHO05D005473 3.5e-98 362.5 261 67.8
Prupe.7G109700 Prunus persica HOM05D004449 ORTHO05D005473 2.3e-97 359.8 259 71.0
CiPaw.09G014500 Carya illinoinensis HOM05D004449 ORTHO05D005473 3.9e-97 359.0 313 62.6
SMO271G0065 Selaginella moellendorffii HOM05D004449 ORTHO05D005473 1.2e-95 354.0 263 68.1
Dinv21204 Davidia involucrata HOM05D004449 ORTHO05D005473 3.6e-95 352.4 266 69.5
AUR62037092 Chenopodium quinoa HOM05D004449 ORTHO05D005473 8.9e-94 347.8 251 72.1
Sabra17G0105100 Salix brachista HOM05D001392 ORTHO05D006407 1.5e-93 347.1 253 71.5
CsaV3_5G040040 Cucumis sativus L. HOM05D004449 ORTHO05D005473 1.7e-92 343.6 254 69.7
SGA_v2.0_scaffold75G24747 Striga asiatica HOM05D004449 ORTHO05D005473 3.7e-92 342.4 268 65.3
PRCOL_00002294 Prasinoderma coloniale HOM05D004449 ORTHO05D005473 5.4e-91 338.6 264 66.3
MCO11G008 Micromonas commoda HOM05D004449 ORTHO05D005473 1.1e-88 330.9 265 60.4
Mapoly0011s0027 Marchantia polymorpha HOM05D004449 ORTHO05D005473 1.9e-88 330.1 292 58.6
VMungo0647G1368 Vigna mungo HOM05D004449 ORTHO05D005473 4.7e-87 325.5 260 68.8
BcaB02g09373 Brassica carinata HOM05D004449 ORTHO05D005473 9.8e-85 317.8 263 65.0
Cpa.g.sc999.2 Carica papaya HOM05D004449 ORTHO05D005473 1.7e-81 307.0 312 57.1
Thecc.05G089600 Theobroma cacao HOM05D004449 ORTHO05D005473 5.1e-81 305.4 211 73.0
Atru.chr8.1532 Acer truncatum HOM05D004449 ORTHO05D005473 1.9e-80 303.5 175 84.0
vmacro04351 Vaccinium macrocarpon HOM05D004449 ORTHO05D005473 2.1e-79 300.1 243 65.0
CBR_g21822 Chara braunii HOM05D004449 ORTHO05D005473 2.3e-78 296.6 274 58.8
Lalb_Chr06g0172381 Lupinus albus HOM05D004449 ORTHO05D005473 3.1e-78 296.2 177 81.9
Rhsim07G0247300 Rhododendron simsii HOM05D004449 ORTHO05D005473 1.9e-72 276.9 183 73.2
RhsimUnG0066500 Rhododendron simsii HOM05D004449 ORTHO05D005473 8.1e-71 271.6 183 72.7
ClCG08G000960 Citrullus lanatus HOM05D004449 ORTHO05D005473 6.6e-65 251.9 182 72.5
Psat1g201080 Pisum sativum HOM05D004449 ORTHO05D005473 2.1e-63 246.9 190 68.4
Oeu056880.1 Olea europaea HOM05D004449 ORTHO05D005473 5.3e-62 242.3 154 75.3
RcHm_v2.0_Chr5g0027171 Rosa chinensis HOM05D004449 ORTHO05D005473 1.5e-61 240.7 170 72.4
COL.COLO4_29729 Corchorus olitorius HOM05D004449 ORTHO05D005473 1.4e-59 234.2 140 80.7
Cfa023382 Carpinus fangiana HOM05D004449 ORTHO05D005473 8.7e-57 224.9 261 46.4
arahy.Tifrunner.gnm1.ann1.1FC84E Arachis hypogaea HOM05D004449 ORTHO05D005473 1.3e-49 201.1 121 79.3
arahy.Tifrunner.gnm1.ann1.IMVN0M Arachis hypogaea HOM05D004449 ORTHO05D005473 1.3e-49 201.1 121 79.3
BcaC02g11729 Brassica carinata HOM05D004449 ORTHO05D005473 2.3e-49 200.3 168 63.7
arahy.Tifrunner.gnm1.ann1.H91IF8 Arachis hypogaea HOM05D004449 ORTHO05D005473 6.7e-49 198.7 121 78.5
arahy.Tifrunner.gnm1.ann1.L677I4 Arachis hypogaea HOM05D004449 ORTHO05D005473 3.3e-48 196.4 121 76.9
Cc11_g01850 Coffea canephora HOM05D004449 ORTHO05D005473 4.0e-46 189.5 150 64.7
ECA233G4866 Erigeron canadensis HOM05D004449 ORTHO05D005473 1.1e-43 181.4 114 78.1
RcHm_v2.0_Chr4g0393091 Rosa chinensis HOM05D004449 ORTHO05D005473 7.4e-40 168.7 108 76.9
SEGI_28293 Sequoiadendron giganteum HOM05D004449 ORTHO05D005473 2.1e-39 167.2 110 74.5
Mapoly0100s0062 Marchantia polymorpha HOM05D004449 ORTHO05D005473 5.9e-37 159.1 125 60.0
SMO308G0039 Selaginella moellendorffii HOM05D004449 ORTHO05D005473 8.5e-36 155.2 142 56.3
unitig_8.g4306 Utricularia gibba HOM05D004449 ORTHO05D005473 6.1e-34 149.1 284 36.6
RcHm_v2.0_Chr1g0350151 Rosa chinensis HOM05D004449 ORTHO05D005473 5.7e-32 142.5 88 77.3
CDE04G3206 Ceratophyllum demersum HOM05D004449 ORTHO05D005473 1.3e-31 141.4 157 49.7
SMO164G0227 Selaginella moellendorffii HOM05D004449 ORTHO05D005473 6.3e-31 139.0 115 61.7
COL.COLO4_29730 Corchorus olitorius HOM05D004449 ORTHO05D005473 1.5e-29 134.4 87 73.6
CDE04G2184 Ceratophyllum demersum HOM05D004449 ORTHO05D000837 2.9e-28 130.2 194 39.7
Os05g0400800 Oryza sativa ssp. japonica HOM05D004449 ORTHO05D005473 7.2e-27 125.6 99 63.6
TAR369G0358 Trochodendron aralioides HOM05D003904 ORTHO05D004378 2.1e-26 124.0 77 83.1
SEGI_22783 Sequoiadendron giganteum HOM05D004449 ORTHO05D005473 6.3e-23 112.5 71 76.1
BcaC02g11730 Brassica carinata HOM05D004449 ORTHO05D005473 8.2e-23 112.1 79 70.9
Lalb_Chr06g0172371 Lupinus albus HOM05D004449 ORTHO05D005473 5.3e-22 109.4 70 80.0
Rhsim07G0247200 Rhododendron simsii HOM05D004449 ORTHO05D005473 6.5e-20 102.4 69 68.1
Rhsim09G0019600 Rhododendron simsii HOM05D004449 ORTHO05D005473 7.9e-18 95.5 70 70.0
arahy.Tifrunner.gnm1.ann1.E2537D Arachis hypogaea HOM05D019151 ORTHO05D005473 6.7e-17 92.4 57 73.7
arahy.Tifrunner.gnm1.ann1.TG6NMP Arachis hypogaea HOM05D019151 ORTHO05D005473 6.7e-17 92.4 57 73.7
Sabra04G0060800 Salix brachista HOM05D004449 ORTHO05D005473 1.1e-16 91.7 191 37.7
RcHm_v2.0_Chr4g0409701 Rosa chinensis HOM05D004449 ORTHO05D005473 7.2e-11 72.4 46 76.1
Aqoxy84s005 Aquilegia oxysepala HOM05D004902 ORTHO05D038539 1.3e-07 61.6 263 22.4
SEGI_40272 Sequoiadendron giganteum HOM05D004449 ORTHO05D005473 3.1e-06 57.0 34 73.5
SEGI_21930 Sequoiadendron giganteum HOM05D004449 ORTHO05D386504 4.1e-06 56.6 63 50.8


User provided reference genes

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