Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G00726 Aquilegia oxysepala HOM05D008437 ORTHO05D010577 1.1e-78 296.6 147 100.0
Aqoxy1G00725 Aquilegia oxysepala HOM05D008437 ORTHO05D010577 1.4e-33 146.7 146 54.1
QL07p036071 Quercus lobata HOM05D008437 ORTHO05D010577 2.0e-24 116.3 159 42.8
Hma1.2p1_0244F.1_g101190 Hydrangea macrophylla HOM05D008437 ORTHO05D010577 5.2e-17 91.7 152 35.5
CSS0044623 Camellia sinensis var. sinensis HOM05D008437 ORTHO05D010577 8.9e-17 90.9 153 35.3
COL.COLO4_14612 Corchorus olitorius HOM05D006607 ORTHO05D008166 1.1e-14 84.0 159 32.1
Atru.chr8.2192 Acer truncatum HOM05D008437 ORTHO05D010577 1.4e-14 83.6 168 33.3
Atru.chr8.2150 Acer truncatum HOM05D008437 ORTHO05D010577 1.8e-14 83.2 168 32.7
Atru.chr8.2145 Acer truncatum HOM05D008437 ORTHO05D010577 2.4e-14 82.8 166 33.1
Nitab4.5_0004827g0010 Nicotiana tabacum HOM05D008437 ORTHO05D010577 4.1e-14 82.0 126 32.5
DCAR_028831 Daucus carota HOM05D008437 ORTHO05D010577 9.2e-14 80.9 118 35.6
COL.COLO4_14611 Corchorus olitorius HOM05D008437 ORTHO05D010577 2.0e-13 79.7 175 30.3
Actinidia13782 Actinidia chinensis HOM05D008437 ORTHO05D010577 7.8e-13 77.8 156 30.8
Nitab4.5_0000008g0620 Nicotiana tabacum HOM05D008437 ORTHO05D010577 1.3e-12 77.0 150 32.0
Gohir.D05G386150 Gossypium hirsutum HOM05D008437 ORTHO05D010577 1.7e-12 76.6 146 34.9
Atru.chr8.2149 Acer truncatum HOM05D008437 ORTHO05D010577 5.0e-12 75.1 166 29.5
Atru.chr8.2191 Acer truncatum HOM05D008437 ORTHO05D010577 6.6e-12 74.7 166 29.5
ECA238G0023 Erigeron canadensis HOM05D012740 ORTHO05D010577 1.1e-11 73.9 128 36.7
CSS0041692 Camellia sinensis var. sinensis HOM05D007726 ORTHO05D008819 1.5e-11 73.6 141 31.2
CSS0044196 Camellia sinensis var. sinensis HOM05D007726 ORTHO05D008819 1.5e-11 73.6 141 31.2
COL.COLO4_27629 Corchorus olitorius HOM05D008437 ORTHO05D010577 1.5e-11 73.6 148 31.8
Gorai.009G452600 Gossypium raimondii HOM05D008437 ORTHO05D010577 1.9e-11 73.2 146 34.2
Peaxi162Scf00141g00138 Petunia axillaris HOM05D008437 ORTHO05D010577 1.9e-11 73.2 150 30.0
Rhsim05G0205500 Rhododendron simsii HOM05D008437 ORTHO05D010577 3.3e-11 72.4 151 33.8
PSO339G1195 Papaver somniferum HOM05D007726 ORTHO05D008819 7.3e-11 71.2 144 32.6
Solyc09g012020.1 Solanum lycopersicum HOM05D008437 ORTHO05D010577 1.0e-09 67.4 151 27.8
Sopen09g006900 Solanum pennellii HOM05D008437 ORTHO05D010577 1.0e-09 67.4 147 29.3
Nn2g13599 Nelumbo nucifera HOM05D008437 ORTHO05D008819 2.3e-09 66.2 142 29.6
AUR62004583 Chenopodium quinoa HOM05D007726 ORTHO05D008819 5.2e-09 65.1 138 29.0
Sopen09g006840 Solanum pennellii HOM05D008437 ORTHO05D010577 5.2e-09 65.1 149 27.5
CANSAT35G0292 Cannabis sativa HOM05D008437 ORTHO05D010577 1.2e-08 63.9 154 31.2
Aqoxy7G00350 Aquilegia oxysepala HOM05D007726 ORTHO05D008819 1.5e-08 63.5 135 28.9
Peaxi162Scf00141g00118 Petunia axillaris HOM05D008437 ORTHO05D010577 1.5e-08 63.5 105 33.3
AUR62023529 Chenopodium quinoa HOM05D007726 ORTHO05D008819 2.0e-08 63.2 140 27.9
Nn1g09439 Nelumbo nucifera HOM05D006664 ORTHO05D008819 2.6e-08 62.8 137 32.1
Solyc09g012010.1 Solanum lycopersicum HOM05D008437 ORTHO05D010577 3.4e-08 62.4 146 26.0
Sopen09g006830 Solanum pennellii HOM05D008437 ORTHO05D010577 3.4e-08 62.4 146 26.0
Thecc.05G022700 Theobroma cacao HOM05D008437 ORTHO05D010577 5.8e-08 61.6 148 30.4
TAR623G0051 Trochodendron aralioides HOM05D008437 ORTHO05D008819 7.5e-08 61.2 133 30.1
Atru.chr8.2190 Acer truncatum HOM05D008437 ORTHO05D010577 9.8e-08 60.8 158 25.9
Sopen03g021420 Solanum pennellii HOM05D008437 ORTHO05D010577 1.3e-07 60.5 146 26.0
MD15G1404600 Malus domestica HOM05D007726 ORTHO05D008819 1.7e-07 60.1 143 30.8
Manes.18G107700 Manihot esculenta HOM05D007726 ORTHO05D008819 1.7e-07 60.1 142 30.3
PGSC0003DMG400046101 Solanum tuberosum HOM05D008437 ORTHO05D010577 1.7e-07 60.1 146 25.3
PSO384G2295 Papaver somniferum HOM05D007726 ORTHO05D008819 2.9e-07 59.3 140 27.9
EL10Ac1g00153 Beta vulgaris HOM05D007726 ORTHO05D008819 6.4e-07 58.2 116 28.4
Nn1g09443 Nelumbo nucifera HOM05D007726 ORTHO05D008819 6.4e-07 58.2 93 35.5
TAR633G0254 Trochodendron aralioides HOM05D007726 ORTHO05D008819 6.4e-07 58.2 138 29.0
CSS0013132 Camellia sinensis var. sinensis HOM05D007726 ORTHO05D008819 8.3e-07 57.8 142 26.8
Nn8g40182 Nelumbo nucifera HOM05D008437 ORTHO05D008819 8.3e-07 57.8 140 30.0
Solyc03g078530.1 Solanum lycopersicum HOM05D008437 ORTHO05D010577 1.1e-06 57.4 146 25.3
Solyc03g078560.1 Solanum lycopersicum HOM05D008437 ORTHO05D010577 1.1e-06 57.4 110 31.8
PGSC0003DMG400020354 Solanum tuberosum HOM05D000312 ORTHO05D000221 1.1e-06 57.4 126 28.6
Aqoxy3G01652 Aquilegia oxysepala HOM05D006664 ORTHO05D008819 5.4e-06 55.1 140 26.4
Hma1.2p1_0026F.1_g016960 Hydrangea macrophylla HOM05D012740 ORTHO05D010577 5.4e-06 55.1 125 33.6
Lsat_1_v5_gn_2_120520 Lactuca sativa HOM05D012740 ORTHO05D010577 5.4e-06 55.1 98 34.7
Sc23g0001620 Simmondsia chinensis HOM05D007726 ORTHO05D008819 9.2e-06 54.3 128 32.8


User provided reference genes

Program Settings